CX069856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP3_BRANA (Non-specific lipid-transfer protein 3 OS=Brassica napus GN=LTP3 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.917e-23 Identity = 52/116 (44.83%), Postives = 75/116 (64.66%), Query Frame = 3 Query: 18 LVTGCILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 LV LVL C++ + ++T A ++CGTV +L C+ Y++ G VPT CC+GV +L N AR+T DRQ C+CL A + + AAGLP CG+NIPY+IS +T+C+SV+ Sbjct: 4 LVKLSCLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANAL--PTINVARAAGLPKACGVNIPYKISKTTNCNSVK 117
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP5_VITSX (Non-specific lipid-transfer protein P5 OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.728e-23 Identity = 48/92 (52.17%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 87 VTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362 ++CG V L PC++Y+ G +P CCNGV+ L N+A +T DR+T CKCL A I + FG AAGLP KCG+NIPY+ISPST+C V Sbjct: 1 LSCGDVATQLAPCINYLRSAGPLPVACCNGVKNLKNSAATTQDRRTACKCLINASKSI--SGVNFGLAAGLPGKCGVNIPYKISPSTNCDQV 90
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUAR (Non-specific lipid-transfer protein 1 OS=Prunus armeniaca PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 7.728e-23 Identity = 50/96 (52.08%), Postives = 66/96 (68.75%), Query Frame = 3 Query: 87 VTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQ---AVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 +TCG V + L PC+ YV GGAVP CCNG+R + N AR+T DR+T C CLKQ ++SG+ AA LP KCG+NIPY+IS ST+C++V+ Sbjct: 1 ITCGQVSSSLAPCIGYVRGGGAVPPACCNGIRNVNNLARTTPDRRTACNCLKQLSGSISGVNPNN-----AAALPGKCGVNIPYKISASTNCATVK 91
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.722e-22 Identity = 56/111 (50.45%), Postives = 72/111 (64.86%), Query Frame = 3 Query: 33 ILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTN-CCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362 ++V+ L+ + S VTCG VV+ L PC+ Y + + PT CC+GVRTL +AA +TADRQT C CLKQ S + R AG+P+KCG+NIPY ISPSTDCS V Sbjct: 13 VMVVALLLAAPAASA---VTCGQVVSMLAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPD--LVAGIPSKCGVNIPYAISPSTDCSRV 118
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDO (Non-specific lipid-transfer protein 1 OS=Prunus domestica PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.722e-22 Identity = 48/96 (50.00%), Postives = 67/96 (69.79%), Query Frame = 3 Query: 87 VTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQ---AVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 +TCG V ++L PC++YV GGAVP CCNG+R + N AR+TADR+ C CLKQ ++ G+ AA LP KCG+N+PY+IS ST+C++V+ Sbjct: 1 ITCGQVSSNLAPCINYVKGGGAVPPACCNGIRNVNNLARTTADRRAACNCLKQLSGSIPGVNPNN-----AAALPGKCGVNVPYKISASTNCATVK 91
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTPB_BRAOT (Non-specific lipid-transfer protein B OS=Brassica oleracea var. italica GN=WAX9B PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.248e-22 Identity = 51/116 (43.97%), Postives = 73/116 (62.93%), Query Frame = 3 Query: 18 LVTGCILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 LV LVL C++ + ++T A ++CGTV +L C+ Y++ G +P CC GV L N AR+T DRQ C+CL A + ++ AAGLP CG+NIPY+IS ST+C+SV+ Sbjct: 4 LVKLSCLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAAN--SFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP3_ARATH (Non-specific lipid-transfer protein 3 OS=Arabidopsis thaliana GN=LTP3 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.936e-22 Identity = 47/112 (41.96%), Postives = 73/112 (65.18%), Query Frame = 3 Query: 30 CILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 C+++ VC++ S A ++CGTV L PC +Y+S GG VP +CC GV+TL + A++T DRQ C+C++ I + A+GLP KCG++IPY IS ST+C++++ Sbjct: 10 CLVLTVCIVASV----DAAISCGTVAGSLAPCATYLSKGGLVPPSCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSI--SGLNPSLASGLPGKCGVSIPYPISMSTNCNNIK 115
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP2_BRANA (Non-specific lipid-transfer protein 2 OS=Brassica napus GN=LTP2 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.936e-22 Identity = 52/119 (43.70%), Postives = 75/119 (63.03%), Query Frame = 3 Query: 9 LMKLVTGCILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 LMKL LVL C++ + +++ A ++CGTV + PC+ Y++ G +P CC GV L N AR+T DRQ C+CL A + ++ AAGLP CG+NIPY+IS ST+C+SV+ Sbjct: 4 LMKLAC---LVLACMIVAGPITSNAALSCGTVSGYVAPCIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAAN--SFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP1_BRANA (Non-specific lipid-transfer protein 1 OS=Brassica napus GN=LTP1 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.936e-22 Identity = 51/116 (43.97%), Postives = 72/116 (62.07%), Query Frame = 3 Query: 18 LVTGCILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 LV LVL C++ + ++T A ++CGTV +L C+ Y++ G +P CC GV L N AR+T DRQ C+CL A + + AAGLP CG+NIPY+IS ST+C+SV+ Sbjct: 4 LVKLSCLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAAN--AFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: SCA_LILLO (Stigma/stylar cysteine-rich adhesin OS=Lilium longiflorum GN=SCA PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.835e-22 Identity = 50/112 (44.64%), Postives = 66/112 (58.93%), Query Frame = 3 Query: 30 CILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 C L+L+ + + T + +TCG V +DLT C+ Y GG +P CC GVRTL N A++T DRQT C CLK V+ AG+P KCG+NIPY I TDC+ V+ Sbjct: 8 CFLLLLAFL----IGTASAITCGQVDSDLTSCLGYARKGGVIPPGCCAGVRTLNNLAKTTPDRQTACNCLKSLVN--PSLGLNAAIVAGIPGKCGVNIPYPIRMQTDCNKVR 113 The following BLAST results are available for this feature:
BLAST of CX069856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069856 ID=CX069856; Name=CX069856; organism=Citrus sinensis; type=EST; length=628bpback to top |