CX069856

Overview
NameCX069856
Unique NameCX069856
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length628
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP2_LENCU (Non-specific lipid-transfer protein 2 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.486e-21
Identity = 50/118 (42.37%), Postives = 77/118 (65.25%), Query Frame = 3
Query:   12 MKLVTGCILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365
            MKL   C+++++C++  A ++  A ++CG V +DL+PC++Y++ G      CC GV+ L  AA +T DRQ  C CLK A   I  T+     AA LP KCG+NIPY+IS +T+C++V+
Sbjct:    5 MKLA--CVVLVICMVVIAPMAEGA-ISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSI--TKLNTNNAAALPGKCGVNIPYKISTTTNCNTVK 117          
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUPE (Non-specific lipid-transfer protein 1 OS=Prunus persica PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.486e-21
Identity = 49/96 (51.04%), Postives = 64/96 (66.67%), Query Frame = 3
Query:   87 VTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQ---AVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365
            +TCG V + L PC+ YV  GGAVP  CCNG+R + N AR+T DRQ  C CLKQ   +V G+         AA LP KCG++IPY+IS ST+C++V+
Sbjct:    1 ITCGQVSSALAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNN-----AAALPGKCGVHIPYKISASTNCATVK 91          
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP_PYRCO (Non-specific lipid-transfer protein OS=Pyrus communis PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.247e-21
Identity = 50/114 (43.86%), Postives = 72/114 (63.16%), Query Frame = 3
Query:   33 ILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQ---AVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365
            ++V +C+     VS    +TC  V  +L PC++YV  GGAVP  CCNG++T+   A++T DRQ  C CLK    +VSG+       G A  LP KCG+N+PY+IS ST+C++V+
Sbjct:   11 LVVALCMA----VSVAHAITCSQVSANLAPCINYVRSGGAVPPACCNGIKTINGLAKTTPDRQAACNCLKNLAGSVSGVNP-----GNAESLPGKCGVNVPYKISTSTNCATVK 115          
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP3_LENCU (Non-specific lipid-transfer protein 3 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.240e-21
Identity = 53/121 (43.80%), Postives = 78/121 (64.46%), Query Frame = 3
Query:    6 MLMKLVTGCILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPT-NCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365
            M   +   C+ +++C++  A ++ +A V+CGTV  DL PC+ Y++ GGA PT +CC GV+ L  AA +TADRQ  C CLK A   I       G AA LP KC +NIPY+IS +T+C++++
Sbjct:    1 MARSMNLACVALVMCMVVIAPMA-EAAVSCGTVTGDLAPCIPYLT-GGAGPTDSCCAGVKKLLAAAPTTADRQAACNCLKTAAGNI--NNLNPGNAAALPGKCNVNIPYKISTTTNCNTIK 117          
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.240e-21
Identity = 51/112 (45.54%), Postives = 72/112 (64.29%), Query Frame = 3
Query:   36 LVLVCLMGSAF-VSTKAQVTCGTVVNDLTPCVSYVSYGGAVP-TNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365
            LVLV L+ +   V+  A ++CG V + L+PC+SY    GA P   CC+GV+ L  AA+STAD+Q  CKC+K A  G+       G AAG+P+ CG+++PY IS S DCS ++
Sbjct:    9 LVLVALVAAMLLVAADAAISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAGGL-----NAGKAAGIPSMCGVSVPYAISASVDCSKIR 115          
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.240e-21
Identity = 52/113 (46.02%), Postives = 72/113 (63.72%), Query Frame = 3
Query:   36 LVLVCLMGSAFVS----TKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362
            LVLV L+ +  ++    T A ++CG V + ++PC+SY   G      CC+GVR+L +AA +TADR+T C CLK     I  +    G AA +P+KCG++IPY ISPS DCSSV
Sbjct:    6 LVLVALVAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSI--SGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116          
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.233e-21
Identity = 50/118 (42.37%), Postives = 77/118 (65.25%), Query Frame = 3
Query:   12 MKLVTGCILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365
            MKL   C+++++C++  A ++  A ++CG V +DL+PC++Y++ G      CC GV+ L  AA +T DRQ  C CLK A   I  T+     AA LP KCG++IPY+IS ST+C++V+
Sbjct:    5 MKLA--CVVLVMCMVVIAPMAEGA-ISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSI--TKLNTNNAAALPGKCGVDIPYKISTSTNCNTVK 117          
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP_GERHY (Non-specific lipid-transfer protein OS=Gerbera hybrida PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.446e-21
Identity = 51/111 (45.95%), Postives = 69/111 (62.16%), Query Frame = 3
Query:   30 CILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362
            C+ V  C++ SA  S    ++CG V + L PC  Y++ GG VP  CCNGVR L NAA++T DRQT C CLK  ++    TR     A  LP KCG++I Y+I+P+ DCS +
Sbjct:   10 CVAV-ACMVFSA--SYADAISCGQVTSGLVPCFGYLAAGGPVPPACCNGVRGLNNAAKTTPDRQTACGCLKGILA--ANTRINLNNANSLPGKCGISIGYKITPNIDCSKI 115          
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.446e-21
Identity = 49/99 (49.49%), Postives = 64/99 (64.65%), Query Frame = 3
Query:   72 STKAQVTCGTVVNDLTPCVSYV--SYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362
            + +A +TCG V   L PC+ Y+       VP  CCN VR L NAAR+T D++T C CLKQ  + +  T      AAGLPA+CG+NIPY+ISP+TDC+ V
Sbjct:   23 NAEAVLTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAV--TGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119          
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTPD_BRAOT (Non-specific lipid-transfer protein D OS=Brassica oleracea var. italica GN=WAX9D PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.446e-21
Identity = 51/120 (42.50%), Postives = 76/120 (63.33%), Query Frame = 3
Query:    9 LMKLVTGCILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGG-AVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365
            LMKL     L+  C++ +  +++ A ++CGTV   + PC+ Y++    AVPT CC+GV +L N AR+T DRQ  C+CL  A + +         AAGLP  CG+NIPY+IS +T+C+SV+
Sbjct:    4 LMKLAC---LIFACMIVAGPITSNAALSCGTVSGYVAPCIGYLAQNAPAVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANAL--PTINVARAAGLPKACGVNIPYKISKTTNCNSVK 118          
The following BLAST results are available for this feature:
BLAST of CX069856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
NLTP2_LENCU2.486e-2142.37Non-specific lipid-transfer protein 2 OS=Lens culi... [more]
NLTP1_PRUPE2.486e-2151.04Non-specific lipid-transfer protein 1 OS=Prunus pe... [more]
NLTP_PYRCO3.247e-2143.86Non-specific lipid-transfer protein OS=Pyrus commu... [more]
NLTP3_LENCU4.240e-2143.80Non-specific lipid-transfer protein 3 OS=Lens culi... [more]
NLT41_HORVU4.240e-2145.54Non-specific lipid-transfer protein 4.1 OS=Hordeum... [more]
NLT2B_ORYSJ4.240e-2146.02Non-specific lipid-transfer protein 2B OS=Oryza sa... [more]
NLTP6_LENCU7.233e-2142.37Non-specific lipid-transfer protein 6 OS=Lens culi... [more]
NLTP_GERHY9.446e-2145.95Non-specific lipid-transfer protein OS=Gerbera hyb... [more]
NLTP_DAUCA9.446e-2149.49Non-specific lipid-transfer protein OS=Daucus caro... [more]
NLTPD_BRAOT9.446e-2142.50Non-specific lipid-transfer protein D OS=Brassica ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13C06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13C06-E11-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069856 ID=CX069856; Name=CX069856; organism=Citrus sinensis; type=EST; length=628bp
CCGTAATGCTGATGAAACTTGTGACAGGCTGCATCTTGGTGCTTGTTTGC
TTGATGGGCAGTGCGTTCGTGTCCACCAAAGCACAAGTAACATGTGGCAC
GGTGGTGAATGACTTGACTCCATGCGTATCCTACGTGTCATACGGCGGGG
CCGTGCCGACGAACTGTTGCAACGGAGTGAGGACACTCTACAATGCCGCT
AGGTCCACAGCTGACCGTCAGACCGTGTGTAAGTGCTTGAAACAAGCTGT
TAGCGGAATCACGTACACCAGGTACCAGTTCGGATTCGCAGCTGGACTTC
CCGCCAAATGTGGACTCAACATTCCTTACCAGATCAGCCCTTCTACCGAC
TGCAGCAGTGTGCAGTGAGAATGATGAACTAGTAGCCATCAGTTATGAGG
CTGTGTGCTTGGATAATTAAGCATGGGGTGAGAGAATAAGAGTGCTGCGC
TTCTCTTTGATGGTGTGTTAGTGTTAAATAGAAGTTGTTAGCGTCATCTG
GTGGGATTTATGTTGTCTCATGTTTTGTTAGGTTCTGTCCCAACCATAAG
TACTAAAGAATAAGATTTTGTAAGTTACGTTTATGGAGTGACATTTTGTT
ATTATGTGTTNNAAAAAAAAAAAAAAAA
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