CX069856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP1_ARATH (Non-specific lipid-transfer protein 1 OS=Arabidopsis thaliana GN=LTP1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.446e-21 Identity = 44/110 (40.00%), Postives = 73/110 (66.36%), Query Frame = 3 Query: 36 LVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 L+L C++ + +++ A ++CG+V ++L C+ YV GG +P CC+GV+ L + A++T DRQ C C++ A + + G AAG+P CG+NIPY+IS ST+C +V+ Sbjct: 10 LLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPACCSGVKNLNSIAKTTPDRQQACNCIQGAARALG-SGLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP2_SORBI (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor GN=LTP2 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.234e-20 Identity = 51/101 (50.50%), Postives = 68/101 (67.33%), Query Frame = 3 Query: 63 AFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPT-NCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362 A +++A VTCG V + + PC+SY G+ P+ CC+GVR+L +AAR+TADR+ C CLK A GI G AA +P+KCG++IPY IS STDCS V Sbjct: 23 AATTSEAAVTCGQVSSAIGPCLSYARGQGSGPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGI--RGLNVGKAASIPSKCGVSIPYTISTSTDCSRV 121
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTPA_BRAOT (Non-specific lipid-transfer protein A OS=Brassica oleracea var. italica GN=WAX9A PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.611e-20 Identity = 43/110 (39.09%), Postives = 71/110 (64.55%), Query Frame = 3 Query: 36 LVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 LVL C++ + ++ +TCGTV +++ PC+ Y++ GG +P CC GV L + AR+T DRQ C+CL+ A + G AAG+P CG+++P+ IS +T+C++V+ Sbjct: 10 LVLACMIVAGPITANRALTCGTVNSNVAPCIGYITQGGTLPGACCTGVSKLNSMARTTPDRQQACRCLETAARALG-PNLNAGRAAGIPKACGVSVPFPISTNTNCNNVK 118
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.104e-20 Identity = 50/108 (46.30%), Postives = 71/108 (65.74%), Query Frame = 3 Query: 39 VLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362 VL+C++ +A + +A +TCG V + L PC+ Y+ GG + CC G++ L AA +T DR+T C CLK A + I Y G AAGLP CG++IPY ISPST+C++V Sbjct: 13 VLLCIVVAAPYA-EAGITCGMVSSKLAPCIGYLK-GGPLGGGCCGGIKALNAAAATTPDRKTACNCLKSAANAIKGINY--GKAAGLPGMCGVHIPYAISPSTNCNAV 116
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.997e-20 Identity = 49/111 (44.14%), Postives = 71/111 (63.96%), Query Frame = 3 Query: 36 LVLVCLMGSAF-VSTKAQVTCGTVVNDLTPCVSYVSYGGAVP-TNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362 LVLV ++ + V+T A ++CG V + L+PC+SY GA P CC+GV+ L AA+STAD+Q C+CLK + I G +G+P KCG+++P+ IS STDC+ V Sbjct: 9 LVLVAMVAAMLLVATDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSI--KGINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLPN (Non-specific lipid-transfer protein 2 OS=Solanum pennellii GN=LTP2 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.997e-20 Identity = 52/110 (47.27%), Postives = 70/110 (63.64%), Query Frame = 3 Query: 39 VLVCLMGSAFVSTKAQ-VTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 VL+C++ V+ A+ +TCG V + L PC+ Y+ G + CC GV+ L A++T DRQT C CLK A S ++T G AA LP+ C +NIPY+ISPSTDCS VQ Sbjct: 11 VLLCMV---VVAPHAEALTCGQVTSTLAPCLPYLMNRGPLG-GCCGGVKGLLGQAQTTVDRQTACTCLKSAAS--SFTGLDLGKAASLPSTCSVNIPYKISPSTDCSKVQ 114
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP1_SORBI (Non-specific lipid-transfer protein 1 OS=Sorghum bicolor GN=LTP1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.044e-19 Identity = 49/119 (41.18%), Postives = 74/119 (62.18%), Query Frame = 3 Query: 9 LMKLVTGCILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPT-NCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362 + +L +V ++ A +++A ++CG V + + C+SY G P+ CC+GVR+L +AAR+TADR+ C CLK A GI + G AA +P+KCG+++PY IS STDCS V Sbjct: 1 MARLAVAIAVVAAVVVVLAATTSEAAISCGQVSSAIALCLSYARGQGFAPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGI--SGLNAGNAASIPSKCGVSVPYTISTSTDCSRV 117
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.781e-19 Identity = 48/111 (43.24%), Postives = 66/111 (59.46%), Query Frame = 3 Query: 36 LVLVCLMGSAF-VSTKAQVTCGTVVNDLTPCVSYVSYGGAVPT-NCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362 L LV L+ + V+ A +TCG V + L PC +Y G P+ CC+GV+ L ARSTAD+Q C+CLK Y G AAG+P++CG+++PY IS S DCS + Sbjct: 9 LALVALVAAMLLVAADAAITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKSVAGA-----YNAGRAAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.781e-19 Identity = 45/95 (47.37%), Postives = 62/95 (65.26%), Query Frame = 3 Query: 87 VTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQ---AVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362 +TCG V +L C+ ++ GG VP +CC GV+ + N++R+TADR+ VC CLK AV GI A LP KCG+NIPY+IS ST+C+S+ Sbjct: 1 MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNN-----AEALPGKCGVNIPYKISTSTNCNSI 90
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP1_LENCU (Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.781e-19 Identity = 44/119 (36.97%), Postives = 70/119 (58.82%), Query Frame = 3 Query: 9 LMKLVTGCILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 + L C++ L+C++ + +A ++CGTV L PC++Y+ G CC GV+ L AAR+T DR+ C CLK + I+ + G A LP KCG+ +PY IS ST+C++++ Sbjct: 1 MASLRVSCLVALMCMVVISAPMAEAAISCGTVSGALVPCLTYLKGGPGPSPQCCGGVKRLNGAARTTIDRRAACNCLKSSAGSISGLKP--GNVATLPGKCGVRLPYTISTSTNCNTIR 117 The following BLAST results are available for this feature:
BLAST of CX069856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069856 ID=CX069856; Name=CX069856; organism=Citrus sinensis; type=EST; length=628bpback to top |