CX069856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.039e-19 Identity = 47/116 (40.52%), Postives = 73/116 (62.93%), Query Frame = 3 Query: 15 KLVTGCILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362 K++T C++VL M S T++ + CGTV + L C++Y++ G +P+ CC GV++LY A++T DR+ VC+CLK ++G A LP CG++IPY IS ST+C S+ Sbjct: 6 KIIT-CLIVLTIYMASP---TESTIQCGTVTSTLAQCLTYLTNSGPLPSQCCVGVKSLYQLAQTTPDRKQVCECLK--LAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLCI (Non-specific lipid-transfer protein 2 OS=Solanum chilense PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.039e-19 Identity = 51/110 (46.36%), Postives = 69/110 (62.73%), Query Frame = 3 Query: 39 VLVCLMGSAFVSTKAQ-VTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 VL+C++ V+ A+ +TCG V + L PC+ Y+ G + CC GV+ L A++T DRQ C CLK A S ++T G AA LP+ C +NIPY+ISPSTDCS VQ Sbjct: 11 VLLCMV---VVAPHAEALTCGQVTSTLAPCLPYLMNRGPLG-GCCGGVKGLLGQAQTTVDRQAACACLKSAAS--SFTDLDLGKAASLPSTCNVNIPYKISPSTDCSKVQ 114
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.039e-19 Identity = 44/110 (40.00%), Postives = 69/110 (62.73%), Query Frame = 3 Query: 36 LVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 +VL C++ + ++ A ++CGTV +L C++Y++ G + CCNGV L N A +T DRQ C+CL+ A + AAGLP+ C +NIPY+IS ST+C++V+ Sbjct: 10 MVLACMIVAGPITANALMSCGTVNGNLAGCIAYLTRGAPLTQGCCNGVTNLKNMASTTPDRQQACRCLQSAAKAVG-PGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.969e-19 Identity = 47/119 (39.50%), Postives = 76/119 (63.87%), Query Frame = 3 Query: 9 LMKLVTGCILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 L+KL T LV+VC++ +A ++++A ++CG V L C +Y++ GG +P CC+GV+ L + AR+T DRQ C+C++ A + +R G AA LP C + I Y IS T+C++V+ Sbjct: 4 LLKLST---LVIVCMLVTAPMASEAAISCGAVTGSLGQCYNYLTRGGFIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALG-SRLNAGRAARLPGACRVRISYPISARTNCNTVR 118
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.969e-19 Identity = 47/93 (50.54%), Postives = 61/93 (65.59%), Query Frame = 3 Query: 87 VTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 ++CG V + L PC+ Y+ G + + CC GV+ L AA+S +DR+T C CLK A + I G AAGLP CG+NIPY+ISPSTDCS VQ Sbjct: 25 LSCGQVQSGLAPCLPYLQGRGPLGS-CCGGVKGLLGAAKSLSDRKTACTCLKSAANAIK--GIDMGKAAGLPGACGVNIPYKISPSTDCSKVQ 114
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP_CICAR (Non-specific lipid-transfer protein OS=Cicer arietinum PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.183e-19 Identity = 48/118 (40.68%), Postives = 71/118 (60.17%), Query Frame = 3 Query: 12 MKLVTGCILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 MK+V C+ +++C++ + ++ +TCG V L PC+ Y+ G CC GVR L +AA +T DRQ C CLK A I +R AA LP KC +NIPY+IS ST+C++++ Sbjct: 4 MKVV--CVALIMCIVIAPMA--ESAITCGRVDTALAPCLGYLQGGPGPSAQCCGGVRNLNSAAVTTPDRQAACNCLKSAAGSI--SRLNANNAAALPGKCVVNIPYKISTSTNCATIR 115
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris GN=IWF1' PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.183e-19 Identity = 46/111 (41.44%), Postives = 70/111 (63.06%), Query Frame = 3 Query: 30 CILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362 C LV+ C+M +A ++ +TCG V + L PC+ Y+ CC G+++L +AA S ADR+T C CLK A + I Y G AA LP +CG+++PY ISP+T+C+++ Sbjct: 11 CALVM-CMMVAAPLAEA--ITCGLVASKLAPCIGYLQGAPGPSAACCGGIKSLNSAAASPADRKTACTCLKSAATSIKGINY--GKAASLPRQCGVSVPYAISPNTNCNAI 116
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.183e-19 Identity = 46/104 (44.23%), Postives = 60/104 (57.69%), Query Frame = 3 Query: 51 LMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362 LM +A + CG V + + PC++YV G CCNGVR L+N A+S+ DRQTVC CLK GI AA +P+KC +N+PY ISP DCS + Sbjct: 15 LMLTAAPRAAVALNCGQVDSKMKPCLTYVQGGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGI--HNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSJ (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. japonica GN=LTP PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.841e-19 Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = 3 Query: 36 LVLVCLMGSAFVSTK---AQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362 LVLV L+ + ++ +TCG V + + PC++Y G CC+GVR+L AA +TADR+T C CLK A GI G AA +P+KCG+++PY IS S DCS V Sbjct: 6 LVLVALVAALLLAAPHAAVAITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGI--KGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.841e-19 Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = 3 Query: 36 LVLVCLMGSAFVSTK---AQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362 LVLV L+ + ++ +TCG V + + PC++Y G CC+GVR+L AA +TADR+T C CLK A GI G AA +P+KCG+++PY IS S DCS V Sbjct: 6 LVLVALVAALLLAAPHAAVAITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGI--KGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115 The following BLAST results are available for this feature:
BLAST of CX069856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069856 ID=CX069856; Name=CX069856; organism=Citrus sinensis; type=EST; length=628bpback to top |