CX069856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.155e-18 Identity = 47/116 (40.52%), Postives = 73/116 (62.93%), Query Frame = 3 Query: 24 TGCILVLVCLMGSAFVSTKAQ--VTCGTVVNDLTPCVSYVSYGGAVPTN-CCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362 T ++ LV ++ +A V+ +A V+CG V + + PC+SYV + P++ CC+GVRTL A S+ADR+T C CLK S ++ G AA +P+KCG+++ + IS S DCS + Sbjct: 7 TMALVALVAVVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMAS--SFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.155e-18 Identity = 47/116 (40.52%), Postives = 73/116 (62.93%), Query Frame = 3 Query: 24 TGCILVLVCLMGSAFVSTKAQ--VTCGTVVNDLTPCVSYVSYGGAVPTN-CCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362 T ++ LV ++ +A V+ +A V+CG V + + PC+SYV + P++ CC+GVRTL A S+ADR+T C CLK S ++ G AA +P+KCG+++ + IS S DCS + Sbjct: 7 TMALVALVAVVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMAS--SFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.508e-18 Identity = 50/110 (45.45%), Postives = 70/110 (63.64%), Query Frame = 3 Query: 39 VLVCLMGSAFVSTKAQ-VTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 VL+C++ V+ A+ +TCG V L PC+ Y+ G + CC GV+ L +A++TADR+T C CLK A + I AAG+P+ C +NIPY+ISPSTDCS+VQ Sbjct: 11 VLLCMV---VVAPHAEALTCGQVTAGLAPCLPYLQGRGPLG-GCCGGVKNLLGSAKTTADRKTACTCLKSAANAIK--GIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLLC (Non-specific lipid-transfer protein 2 OS=Solanum lycopersicum GN=LE16 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.970e-18 Identity = 46/93 (49.46%), Postives = 60/93 (64.52%), Query Frame = 3 Query: 87 VTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 ++CG V + L PC+ Y+ G + CC GV+ L AA++ DR+T C CLK A + I G AAGLP CG+NIPY+ISPSTDCS+VQ Sbjct: 25 LSCGEVTSGLAPCLPYLEGRGPLG-GCCGGVKGLLGAAKTPEDRKTACTCLKSAANSIK--GIDTGKAAGLPGVCGVNIPYKISPSTDCSTVQ 114
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.572e-18 Identity = 50/110 (45.45%), Postives = 70/110 (63.64%), Query Frame = 3 Query: 39 VLVCLMGSAFVSTKAQ-VTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 VL+C++ V+ A+ +TCG V L PC+ Y+ G + CC GV+ L +A++TADR+T C CLK A + I AAG+P+ C +NIPY+ISPSTDCS+VQ Sbjct: 11 VLLCMV---VVAPHAEALTCGQVTAGLAPCLPYLQGRGPLG-GCCGGVKGLLGSAKTTADRKTACTCLKSAANAIK--GIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.360e-18 Identity = 52/120 (43.33%), Postives = 71/120 (59.17%), Query Frame = 3 Query: 12 MKLVTGCILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGA--VPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 M L C++VL CL+ A ++ A ++ V + L PCV YV A P N C G+R+L +AAR DRQ CKC+K + I+ Y G AAGLP +C ++IPY+ISPS DC V+ Sbjct: 5 MSLKLACVVVL-CLLVDAPLAQGA-ISYDQVKSSLLPCVGYVRGNNARPAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINY--GVAAGLPGQCNVHIPYKISPSIDCKRVK 120
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.408e-16 Identity = 45/108 (41.67%), Postives = 60/108 (55.56%), Query Frame = 3 Query: 39 VLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362 V + LM +A + CG V + + PC+SYV G CC+GV+ L+N ARS +DRQ+ C CLK GI A +P KCG+N+PY IS + DCS V Sbjct: 8 VALVLMLAAVPRAAVAIDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGI--HNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 4.541e-15 Identity = 37/112 (33.04%), Postives = 60/112 (53.57%), Query Frame = 3 Query: 27 GCILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSV 362 G ++ + +M V +TC V +LTPC+ Y+ GG CC G + L A R+ ADR+T CKC K A + + + A+ LP KCG++ I+P+ +C+++ Sbjct: 7 GVAILAMIVMAQLMVHPSVAITCNDVTGNLTPCLPYLRSGGKPTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQL---KVRPDMASSLPGKCGISTSIPINPNVNCNTI 115
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.931e-15 Identity = 47/121 (38.84%), Postives = 69/121 (57.02%), Query Frame = 3 Query: 9 LMKLVTGCILVLVCLMGSAFVSTKAQVTCGTVVNDLTPCVSYVSYGGAVPTN--CCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPY--QISPSTDCSS 359 LMKL GC LV V ++ + ++ KA ++CG V ++L PC Y++ GG CCNGVR L +T DR+ C+C+K A + AAG+P +CG+ IPY QI +T C++ Sbjct: 4 LMKL--GC-LVFVFVIAAGPITAKAALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVG-PGLNADRAAGIPRRCGIKIPYSTQIRFNTKCNT 120
BLAST of CX069856 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.746e-15 Identity = 40/95 (42.11%), Postives = 57/95 (60.00%), Query Frame = 3 Query: 87 VTCGTVVNDLTPCVSYVSYGGAVP--TNCCNGVRTLYNAARSTADRQTVCKCLKQAVSGITYTRYQFGFAAGLPAKCGLNIPYQISPSTDCSSVQ 365 VTC V L PC++Y+ GA P NCC GVR+L AA++ ADR+ C C+K A Y+ AA L ++CG+ + Y +SP+ +C+SVQ Sbjct: 2 VTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYK--VAARLASQCGVRMSYSVSPNVNCNSVQ 94 The following BLAST results are available for this feature:
BLAST of CX069856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069856 ID=CX069856; Name=CX069856; organism=Citrus sinensis; type=EST; length=628bpback to top |