CX069843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_NICTO (Putative membrane protein ycf1 OS=Nicotiana tomentosiformis GN=ycf1-A PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.595e-61 Identity = 119/216 (55.09%), Postives = 155/216 (71.76%), Query Frame = 1 Query: 115 SQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 SQAYVFYKL Q ++N LR VLQY+ TS FLK ++KD+F GIF+ +L+HK L ++ N K+ L HYQYDLS+I+W+RL+PQ+ RNR NQ CMAQN++L K +SYEK+ L HY+K++ E L NQK NFKK YRYDLL+YKS+NYE+K DS+I R QVN E SN N K L MLG++ INNY+ + +I+ +E+ L RKYFDW Sbjct: 1225 SQAYVFYKLSQTQVINLSKLRSVLQYNRTSFFLKTKLKDYFRTLGIFHSELKHKKLQSYRINQWKNWLRRHYQYDLSQIRWSRLMPQKRRNRVNQSCMAQNRNLNKWNSYEKDQLIHYKKENDSELYSLSNQKDNFKKCYRYDLLAYKSINYENKNDSFICRLPFQVNKNLEISSNSNTSKHNLFYMLGNLHINNYLRKGNILYIERNLDRKYFDW 1440
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_EUCGG (Putative membrane protein ycf1 OS=Eucalyptus globulus subsp. globulus GN=ycf1 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.950e-59 Identity = 133/258 (51.55%), Postives = 164/258 (63.57%), Query Frame = 1 Query: 1 ERINKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNG--LTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEEYYSNYNR--KKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 E+I KTNKN I L SFSQ AYVFY+L Q N Y LR VLQYHGTS FLKNEIKD+FE GIF +L+HK + N K+ L GHYQYDLS I+W RLVP +WRNR NQ + QNKDL KR S EK+ L +Y+K + FE + L N K N +K+Y YDL SYKS+NYE+KKDS+I S +++NNK+E NYN+ KK KL+ M G I N + +DDI+++ KF RKY DW Sbjct: 1170 EKIAKTNKNTIRFIWTKKKSISDISKKNSKILLSSFSQ--AYVFYQLYQTQFCNLYKLRYVLQYHGTSFFLKNEIKDYFETQGIFYPELKHKNILNSEMIQWKNWLRGHYQYDLSPIRWYRLVPHKWRNRFNQTRLVQNKDLNKRHSDEKDRLILINYKKLNDFELNSLSNSKYNLQKYYGYDLFSYKSINYENKKDSHIYVSPLRLNNKQEISYNYNKIYKKGKLINMPGGIIPIN-LEDDDILNLXKFTDRKYLDW 1424
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_ATRBE (Putative membrane protein ycf1 OS=Atropa belladonna GN=ycf1-A PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 4.344e-59 Identity = 123/256 (48.05%), Postives = 163/256 (63.67%), Query Frame = 1 Query: 1 ERINKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNK--DLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 E+IN K IST++ +L SQ AYVFYKL Q ++N R VLQY+ TS FLK +IKD+F GIF+ +L+HK L ++ N K+ L HYQYDLS+I+W+RL+PQ+WRNR NQ CMAQNK +L K +SYE + L HY+K++ E L NQ+ NF+K YRYDLLSYKS+NY++K DS+I R QVN E N N K M G++ INNY+ + +I+ +E+ L RKYFDW Sbjct: 1171 EKINNKKKIHFISTLKKSLYNISNKNSHIFFDLSYLSQ--AYVFYKLSQTQVINLSKFRSVLQYNRTSFFLKTKIKDYFRTLGIFHSELKHKKLQSYRINQWKNWLRRHYQYDLSQIRWSRLMPQKWRNRVNQSCMAQNKNINLNKWNSYENDQLIHYKKENDSELYSLSNQEDNFQKCYRYDLLSYKSINYKNKSDSFISRLPFQVNKNLEISYNSNTSKHNFFDMPGNLYINNYLRKGNILYIERNLDRKYFDW 1424
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_SOLBU (Putative membrane protein ycf1 OS=Solanum bulbocastanum GN=ycf1 PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.651e-58 Identity = 124/255 (48.63%), Postives = 164/255 (64.31%), Query Frame = 1 Query: 16 TNKNRI----ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNK--DLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 TNK +I ISTI+ C+L SQ AYVFYKL Q ++N R VLQY+ TS FLK +IKD+F+K GIF+ +L+HK L ++ N K+ L HYQYDLS+I+W+RL+P++WR R NQ CMAQNK +L K +SYEK+ L HY+K++ E L NQK NFKK YRY LL+YKS+NYE+K DS+ R QV E N N K + M ++ INNY+ + +I+D+E+ L RKYFDW Sbjct: 1185 TNKKKIHFIFISTIKKSLYNISKKNSHIFCDLSYLSQ--AYVFYKLSQTQVINLSKFRSVLQYNTTSCFLKTKIKDYFKKLGIFHSELKHKKLQSYRINQWKNWLRWHYQYDLSQIRWSRLMPKKWRTRVNQSCMAQNKNRNLNKWNSYEKDQLIHYKKENDSELYSLSNQKDNFKKCYRYGLLAYKSINYENKSDSFFSRLPFQVKKNLEISYNSNTSKHNFVDMPVNLHINNYLRKVNILDIERNLDRKYFDW 1437
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_PANGI (Putative membrane protein ycf1 OS=Panax ginseng GN=ycf1 PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 2.156e-58 Identity = 129/259 (49.81%), Postives = 161/259 (62.16%), Query Frame = 1 Query: 1 ERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNGLTHYEKQHFFEADLL--RNQKSNFKKHYRYDLLSYKSLNYEDKKDSY-IDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 E INKTN+N I ISTI+ S SQAYVFYKL + ++N Y LR VL+YHGTS FLK IKD F GIF+ +L H ++G N K+ L GHYQY+LS+I+W+ L+PQ+WRN NQ + Q K+L K DS K+ L HY+KQ+ FE L N+ N +K+YRYDLLSYKS+NYE K D Y I S +QVNN + NY +K K +L I INNY+G+ DIM MEK RKYFDW Sbjct: 1205 ETINKTNQNTIHFISTIKKSLYNIRNSKKNSHLFFDLSSLSQAYVFYKLSRTRVINLYKLRSVLEYHGTSFFLKTAIKDSFGTQGIFHSELEHTKFPSYGTNQWKNWLRGHYQYNLSQIRWSGLIPQKWRNTINQGRITQKKNLTKWDS--KDRLLHYKKQNAFEVYSLPNPNKNENSQKYYRYDLLSYKSINYERKTDPYIIYGSPLQVNNNQRISYNYTTQKQKFFDILEDIPINNYLGKGDIMYMEKNPDRKYFDW 1461
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_SOLTU (Putative membrane protein ycf1 OS=Solanum tuberosum GN=ycf1-A PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.803e-58 Identity = 122/255 (47.84%), Postives = 164/255 (64.31%), Query Frame = 1 Query: 16 TNKNRI----ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNK--DLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 TNK +I ISTI+ C+L SQ AYVFYKL Q ++N R VLQY+ TS FLK +IKD+F+ GIF+ +L+HK L ++ N K+ L HYQYDLS+I+W+RL+P++WR + NQ CMA+NK +L K +SYEK+ L HY+K++ E L NQK NFKK YRY LL+YKS+NYE+K DS+ R QV E N N K + M G++ INNY+ + +I+D+E+ L RKYFDW Sbjct: 1185 TNKKKIHFIFISTIKKSLYNISKKNSHIFCDLSYLSQ--AYVFYKLSQTQVINLSKFRSVLQYNTTSCFLKTKIKDYFKTLGIFHSELKHKKLQSYRINQWKNWLRWHYQYDLSQIRWSRLMPKKWRTKVNQSCMAKNKNRNLNKWNSYEKDQLIHYKKENDSELYSLSNQKDNFKKCYRYGLLAYKSINYENKSDSFFSRLPFQVKKNLEISYNSNTSKHNFVDMPGNLHINNYLRKVNILDIERNLDRKYFDW 1437
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_HELAN (Putative membrane protein ycf1 OS=Helianthus annuus GN=ycf1 PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.803e-58 Identity = 128/259 (49.42%), Postives = 166/259 (64.09%), Query Frame = 1 Query: 1 ERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNL---LSFSQSQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 E+INKT +N+I IST N+ LS+ SQ YVF KL Q +++F LR +LQY+G S FLKNEIKDFF + GIF+Y++RHK L N G N K+ L GHYQYDLS+I W+RLVPQ+WRN NQ +QNKDL K SYEK+ L Y+K+ + LL N++ NF+K+YRYD LSYK ++ E K SYI RS ++ N K+E N R K K + +L +I I NY+G+ DI+ MEK RKY W Sbjct: 1054 EKINKTKQNQIDFISTRTIKKAFDNLRNSKRKSNIFFELSYL-SQKYVFLKLSQTQVIHFNKLRSILQYNGPSFFLKNEIKDFFGRQGIFDYEVRHKKLPNSGMNPWKNWLRGHYQYDLSQITWSRLVPQKWRNGKNQCQPSQNKDLNKWYSYEKDQLFDYKKKQNLKVYLLSNKEENFQKNYRYDRLSYKYIHSETNKKSYIYRSSLEPNKKQE---NSTRNKEKTVNILKNIPIKNYLGKSDIIYMEKNTDRKYLGW 1308
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_LIRTU (Putative membrane protein ycf1 OS=Liriodendron tulipifera GN=ycf1 PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 6.273e-58 Identity = 127/258 (49.22%), Postives = 164/258 (63.57%), Query Frame = 1 Query: 1 ERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQ--VNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 E I++TN+N I ISTI+ C+L S SQ AYVFY LLQ+ ++N Y LR VLQY G LFLK+ IKD F GI + + R K N G N K+ L GHYQY+LS+ +W+RLVPQ+WRNR NQ QNKD K+DSYEK+ HYEKQ+ + + L N+K FKKHYRYDLLS+K ++YED+KDSYI S +Q VN E NYN K + + I+I++Y+GE+ I+D K RKY +W Sbjct: 1135 EGIDETNQNAIHFISTIKKSLSNISNNKSQIYCDLSSLSQ--AYVFYNLLQIQVINKYYLRFVLQYRGAYLFLKDRIKDHFGTRGILDAKSRPKKPPNSGMNEWKNWLRGHYQYNLSQTRWSRLVPQKWRNRVNQRRTIQNKD-SKKDSYEKDQFIHYEKQNNYVVNSLPNKKEKFKKHYRYDLLSHKYIHYEDRKDSYIYGSPLQVNVNGDREIPYNYNTPKPESFYVPRGIAISDYLGEESIIDTGKNPDRKYLEW 1389
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_NANDO (Putative membrane protein ycf1 OS=Nandina domestica GN=ycf1 PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.384e-57 Identity = 132/263 (50.19%), Postives = 161/263 (61.22%), Query Frame = 1 Query: 7 INKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSG--HYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFK--KHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKV-----KLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 I++TN N I ISTI+ S SQAYVFYKL Q + N Y+LR VLQY GT LFLK+ IKD F GIF+ + HK L NF N K+ L G HYQYD S+ +W+RLVPQ+WRNR +Q CM Q K+ D YEK+ L HYEKQ+ + +L NQK FK K+ +YD LS+K ++YEDKKDSYI RS +QVN +E+ NYN KL M G IS+NNY+ ED D EK L RKYFDW Sbjct: 1127 IDETNPNTIHFISTIKKSLSNINNSNNNSQIFCDLDSLSQAYVFYKLSQTQVFNKYHLRSVLQYRGTLLFLKDRIKDSFGTQGIFHSESGHKKLRNFRMNEWKNWLRGRYHYQYDFSQTRWSRLVPQKWRNRIHQRCMVQTKNSTYSDLYEKDQLIHYEKQNNYAVEL--NQKDKFKNYKYDKYDRLSHKYIHYEDKKDSYIYRSPLQVNEAKEFLYNYNTYNYSTYNPKLFFMSGDISLNNYLREDS--DTEKNLDRKYFDW 1385
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_SOLLC (Putative membrane protein ycf1 OS=Solanum lycopersicum GN=ycf1-A PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.113e-57 Identity = 124/260 (47.69%), Postives = 164/260 (63.08%), Query Frame = 1 Query: 1 ERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNK--DLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDR--SLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 E+IN K ISTI+ C+L SQ AYVFYKL Q ++NF R VLQY+ TS FLK +IKD+F+ GIF+ +L+HK L ++ N K+ L HYQYDLS+I+W+RL+P++WR R NQ CMAQNK +L K +SYEK+ L HY+K++ E L N+K NFKK Y Y LL+YKS+NYE+K DS+ R VQV E N N K + M G++ INNY+ + +I+D E+ L RKYFDW Sbjct: 1184 EKINNQKKIHFMFISTIKKSLYNISKKNSHILCDLSYLSQ--AYVFYKLSQTQVINFSKFRSVLQYNTTSCFLKTKIKDYFKTLGIFHSELKHKKLQSYRINQWKNWLRWHYQYDLSQIRWSRLMPKKWRTRVNQSCMAQNKNRNLNKWNSYEKDQLLHYKKENDSELYSLSNEKDNFKKCYGYGLLAYKSINYENKSDSFFSRLPFEVQVKKNLEISYNSNTSKHNFVDMPGNLHINNYLRKGNILDRERNLDRKYFDW 1441 The following BLAST results are available for this feature:
BLAST of CX069843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069843 ID=CX069843; Name=CX069843; organism=Citrus sinensis; type=EST; length=763bpback to top |