CX069843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_AMBTC (Putative membrane protein ycf1 OS=Amborella trichopoda GN=ycf1 PE=3 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 3.128e-41 Identity = 95/220 (43.18%), Postives = 134/220 (60.91%), Query Frame = 1 Query: 109 SQSQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRD--SYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEE-YYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFD 759 S SQAYVFYKL Q P + Y L + QY + +K+ IKD+ E IF+ + +HK NFG N K+ L G+YQY+ S +W+RL PQ+WRN+ N+ CM +NKD K D SYEK+ L ++E+ + ADLL+N K K YRYDLLSY+ +N+ + Y RSL+QVN ++ + + + L +I++Y+ E I+DMEK RKYFD Sbjct: 1121 SLSQAYVFYKLSQKPGIKKYRLGSLFQYR-RAYSIKDRIKDYLEIERIFHSESKHKKPGNFGMNEWKNWLIGNYQYNFSYTRWSRLDPQKWRNKVNEQCMIKNKDSKKTDSYSYEKDPLINHERHILYSADLLQNHKKKLSKRYRYDLLSYRYINFGNNSSIY--RSLLQVNEEQRILILSSHSHIIHKYEQLNLPAISDYLEERFIVDMEKKTDRKYFD 1337
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_RANMC (Putative membrane protein ycf1 OS=Ranunculus macranthus GN=ycf1 PE=3 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 4.516e-40 Identity = 91/218 (41.74%), Postives = 130/218 (59.63%), Query Frame = 1 Query: 115 SQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGH--YQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 SQAYVFYKL Q+ + N YNL+ + QYHGT F+K++IK FF GIFN + RHK +FG N + L G+ YQY+LS+ W+ LVPQ+WRNR N++ +A + + YEK L HYEK+ + + L +++ K+Y+YDLLS K +NYE+ S ++VN NYN ++ + G I NY+ ED +D ++ RKY DW Sbjct: 1128 SQAYVFYKLSQIQVSNKYNLKSLFQYHGTIPFIKDKIKIFFGTQGIFNSESRHKNFHDFGMNEWQSWLMGNDQYQYNLSQTCWSGLVPQKWRNRINKN-LANSSNFY---FYEKEPLIHYEKEKNYAVNSLPSRREKL-KNYKYDLLSNKYINYENNSSSSFYGLPLEVNQAHAILYNYNTYNSEVFDLSGDIDFRNYLREDYDIDRDQNSDRKYLDW 1340
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_LOTJA (Putative membrane protein ycf1 OS=Lotus japonicus GN=ycf1 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.993e-39 Identity = 110/263 (41.83%), Postives = 146/263 (55.51%), Query Frame = 1 Query: 1 ERINKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQ-SQAYVFYKLLQVPILNFYN--LRPVLQYHGTSLFLKNEIKD-FFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNGL---THYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKD--SYIDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 E I+KTN++ II I N S SQAYVF+K+ Q+ +LN Y + V Y G S F+K+EIKD FF GI + +LRHK +N + L HYQYDLS+ +W+RLV + +NR N+H + QNKDL K DSY+K L + ++Q F +LL +K KK RYDLL YK +NY +KK+ Y RS Q N K +YN +K + + ISI NYI ED I +E+ RKYFDW Sbjct: 1137 EIIDKTNQS-IIHFISIINKSSNTKNTNSAANSYEVSALSQAYVFFKISQIQVLNVYKYKFKYVFDYDGRSFFIKDEIKDYFFGIQGIIHSKLRHKNSPVSLKNQWTNWLKVHYQYDLSQNRWSRLVQKNLKNRINKHRLDQNKDLTKCDSYKKTQLIVSKNKKQQVDFLVNLLIQKK--IKKQSRYDLLLYKFINYAEKKELSIYGYRSPFQANKKRAISYDYNTQKKEFFDRMDDISIKNYIAEDAIRYIEQNRDRKYFDW 1396
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_PHAVU (Putative membrane protein ycf1 OS=Phaseolus vulgaris GN=ycf1 PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.521e-39 Identity = 102/223 (45.74%), Postives = 130/223 (58.30%), Query Frame = 1 Query: 115 SQAYVFYKLLQVPILNF--YNLRPVLQYHGTSLFLKNEIKD-FFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHY-QYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYI--DRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDD-IMDMEKFLYRKYFDW 762 SQAYVF+ LLQ I+N Y LR + +YH F+KN+IK+ FF GI + +L K L N RN + L HY QYDLS +W++L+ Q+WRNR + +AQN +L K DSY K+ L Y++Q K +K YRYDLLSY +NY +KKDSYI RSL Q N SNYN K L + +I I NY ED I+D+EK RKY DW Sbjct: 1175 SQAYVFFNLLQTRIININIYKLRLLFEYHKNFFFVKNKIKNSFFGAQGIVHSKLEQKNLLNSKRNQWTNWLKNHYYQYDLSNSRWSKLLSQKWRNRITKFGVAQNPNLTKWDSYGKSPLIIYKEQQGAAL------KKKIRKQYRYDLLSYNFMNYANKKDSYIYGYRSLFQSNKNIWISSNYNTYKKNLFDRISNIFIKNY--EDAIIIDIEKNSNRKYLDW 1389
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_OENEH (Putative membrane protein ycf1 OS=Oenothera elata subsp. hookeri GN=ycf1 PE=3 SV=3) HSP 1 Score: 158.688 bits (400), Expect = 3.237e-38 Identity = 96/236 (40.68%), Postives = 136/236 (57.63%), Query Frame = 1 Query: 109 SQSQAYVFYKLLQVP---ILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNGLTHYEKQHFFEADLLRNQKS--------------NFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINN-YIGEDDIMDMEKFLYRKYFDW 762 S SQAYVFYKL Q +++ LR VLQY GTS FLK E+KD+FE +F+ +L+HK N G+N K+ L +QY +S I W L PQ+WR + NQ M +N DL KR S EK ++ FFEA+ L ++++ N K Y YDL SY+S+N EDK V +NNK++ NYNR+KV L+ I+++N ++ ++D++D+ F RKY W Sbjct: 1637 SMSQAYVFYKLYQTQQTQLIHLDKLRYVLQYDGTSRFLKKELKDYFEAQELFHSKLKHKNSLNSGKNQWKNWLKAQHQYSVSPIIWNSLSPQKWRTKVNQERMDENTDLNKRYSNEK-------RKQFFEANSLDDEENVVETYLGQRAGDIKNSIKSYSYDLFSYQSINSEDK--------YVCINNKQKNSYNYNRRKVNLVDSPEGIALSNQFLVQNDLLDLYTFPDRKYVPW 1857
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_ARATH (Putative membrane protein ycf1 OS=Arabidopsis thaliana GN=ycf1-A PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.227e-38 Identity = 88/220 (40.00%), Postives = 128/220 (58.18%), Query Frame = 1 Query: 109 SQSQAYVFYKLLQVPILNFYNLRPVLQYHG--TSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 S SQAYVFYKL Q+ + NF L+ VL+Y+ TS F+KN+IK FF++HGIF+Y+L++K N N K+ L YQY+L +I WARLV Q W+N+ N+ + N L K DSYEK +Y+KQ FFEAD L N K N KK Y+L YKS++ +K N++ + + L + +++++ + +I M + +RKY DW Sbjct: 1150 SLSQAYVFYKLSQIKVSNFCKLKAVLEYNICITSFFVKNKIKVFFQEHGIFHYELKNKTFLNSEVNQWKNWLRSQYQYNLPQISWARLVTQNWKNKINKDSLVLNPSLTKEDSYEKKKFDNYKKQKFFEADSLLNPKHNVKKDSIYNLFCYKSIHSTEK--------------------NFD---MSIGIALDNCLVSSFLEKYNIRGMGEIRHRKYLDW 1346
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_CAPBU (Putative membrane protein ycf1 OS=Capsella bursa-pastoris GN=ycf1-A PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.210e-38 Identity = 87/220 (39.55%), Postives = 126/220 (57.27%), Query Frame = 1 Query: 109 SQSQAYVFYKLLQVPILNFYNLRPVLQYHG--TSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 S SQAYVFYKL Q+ + N L+ VL+Y+ TS F+KN+IK FF++ GIF+Y+L++K N N K+ L HYQY+L +I WARLV Q W+ + N+ + N L K DSYEK +Y+KQ+FFEAD + N K NFKK Y Y+L YKS ++ E ++ Y + L + +++ + + +I M + +RKY DW Sbjct: 1155 SLSQAYVFYKLSQIKVSNVSKLKDVLEYNICITSFFVKNKIKSFFQEQGIFHYELKNKTFLNSEVNQWKNWLRSHYQYNLPQIAWARLVTQNWKKKINKDSLVLNPSLTKEDSYEKKKFDNYKKQNFFEADSVLNPKHNFKKDYIYNLFCYKS-----------------IHPTENFFDMY------VGIALDNCLVSSCLEKYNIRGMREIWHRKYVDW 1351
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_OLIPU (Putative membrane protein ycf1 OS=Olimarabidopsis pumila GN=ycf1-A PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 9.417e-38 Identity = 87/220 (39.55%), Postives = 127/220 (57.73%), Query Frame = 1 Query: 109 SQSQAYVFYKLLQVPILNFYNLRPVLQYHG--TSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 S SQAYVFYKL Q+ + NF L+ V +Y+ TS F+KN+IK FF++ GIF+Y+L++K N N K+ L HYQY+L +I WARLV Q W+ + N+ + N L K DSYEK +Y+KQ+FFEAD L N K NFKK Y+L YKS++ +K +D S+ L + +++++ + +I + + +RKY DW Sbjct: 1160 SLSQAYVFYKLSQIKVSNFSKLKDVFEYNIRITSFFVKNQIKVFFQEQGIFHYELKNKTFLNSEVNQWKNWLRSHYQYNLPQIAWARLVTQNWKKKINKDSLVLNPSLTKEDSYEKKKFDNYKKQNFFEADALLNPKHNFKKDSIYNLFCYKSIHSTEKN---LDMSIG--------------------IALDNCLVSSFLEKYNIRGIGEIRHRKYLDW 1356
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_ACOCL (Putative membrane protein ycf1 OS=Acorus calamus GN=ycf1 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 9.417e-38 Identity = 104/259 (40.15%), Postives = 147/259 (56.76%), Query Frame = 1 Query: 1 ERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDS--YEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSL--NYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFD 759 E+I++TN+N I ISTI+ S SQAYV YKL Q ++ Y L+ VLQYH FLK+ IKD F I + + R K L N K+ L GHYQY+LS+ +W+ LVP++WR + NQ + +NK K +S EKN HY K+ + D L +QK KK YRYDLLS+K + NYED++ S I R +Q+N E +YNR++ +L + I++Y+GE+ + ++K RKYFD Sbjct: 1204 EKIDETNQNTIHFISTIRNSFSNSNLNNKSKIYWDFSLL-SQAYVLYKLSQTQVIKRYQLKSVLQYHRAYPFLKDRIKDLFGTPRIVHAKSRPKKLPISRINAWKNWLRGHYQYNLSQTRWSELVPKKWREKFNQRTI-KNKYSRKLNSSEKEKNQQAHYAKEISYVVDSLSSQKGKLKKDYRYDLLSHKYINSNYEDREYSDISRLSLQINGDREIPYDYNRQESDY--VLVGLPISDYLGEEYFIGVDKNSDRKYFD 1458
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_ACOAM (Putative membrane protein ycf1 OS=Acorus americanus GN=ycf1 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 9.417e-38 Identity = 104/259 (40.15%), Postives = 147/259 (56.76%), Query Frame = 1 Query: 1 ERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDS--YEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSL--NYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFD 759 E+I++TN+N I ISTI+ S SQAYV YKL Q ++ Y L+ VLQYH FLK+ IKD F I + + R K L N K+ L GHYQY+LS+ +W+ LVP++WR + NQ + +NK K +S EKN HY K+ + D L +QK KK YRYDLLS+K + NYED++ S I R +Q+N E +YNR++ +L + I++Y+GE+ + ++K RKYFD Sbjct: 1204 EKIDETNQNTIHFISTIRNSFSNSNLNNKSKIYWDFSLL-SQAYVLYKLSQTQVIKRYQLKSVLQYHRAYPFLKDRIKDLFGTPRIVHAKSRPKKLPISRINAWKNWLRGHYQYNLSQTRWSELVPKKWREKFNQRTI-KNKYSRKLNSSEKEKNQQAHYAKEISYVVDSLSSQKGKLKKDYRYDLLSHKYINSNYEDREYSDISRLSLQINGDREIPYDYNRQESDY--VLVGLPISDYLGEEYFIGVDKNSDRKYFD 1458 The following BLAST results are available for this feature:
BLAST of CX069843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069843 ID=CX069843; Name=CX069843; organism=Citrus sinensis; type=EST; length=763bpback to top |