CX069842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_LEPVR (Putative membrane protein ycf1 OS=Lepidium virginicum GN=ycf1-A PE=3 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 7.628e-65 Identity = 137/258 (53.10%), Postives = 172/258 (66.67%), Query Frame = -2 Query: 2 NQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 775 N + EE ELAD+ SD +KQ+ S LSNQEK +E Y S K R KKQSK TEV+LD FL R+ QLRW F +KILN+++VYC L+RL NP+++AI+SI+RGEMSL IL+ +K F L +L K G+LIIEP RLSV+N+GQ +Y+ +GI+LV KNK KI+KRY KK ++ I K+QK T NR KNHYD VPE IL PKRRRE R LICFN K +N +N F N + VL K K+L Sbjct: 1433 NLNNEEKELADEVELESDNEKQINPESALSNQEKTIQEIYAESKKKKRQNKKQSKSNTEVELDLFLTRHSRFQLRWN--CFFNQKILNNVKVYCLLIRLKNPNEIAISSIERGEMSLDILMIEKNFTLAKLMKKGILIIEPVRLSVQNNGQLIIYRTIGISLVQKNKHKISKRY-------KKKIEKSITKYQKKTVNRKKNHYDFFVPENILSPKRRREFRILICFNLKKKNASDRNSRFDKNIQNLTTVLHKKKDL 1681
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_TOBAC (Putative membrane protein ycf1 OS=Nicotiana tabacum GN=ycf1 PE=3 SV=2) HSP 1 Score: 246.514 bits (628), Expect = 1.301e-64 Identity = 139/280 (49.64%), Postives = 185/280 (66.07%), Query Frame = -2 Query: 2 ISPTQKEYF------ELSNQSKEENELADQGTPR--SDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVLDKNKNL 811 I+ QK+ F ++ N+ +E E A QG SD + + LG VLS + +++Y SD K KKKQ K TE +LD FLKRYL QLRW A++ ++++ +++VYC L+RLINPS +AI+SIQR EMSL I++ +K L EL K G+LIIEP RLSVKN+GQF +YQ +GI+LVHK+K + +RY E+ YVDKK+FDEFI + Q N +KNH+DLLVPE IL +RRRELR FNS N NG+ +N VF NN K + LD+ K L Sbjct: 1571 INKNQKQNFFLRSNKKIKNRIQEAKEPASQGEKERGSDIENKGNLGPVLSKHQNALKKDYAESDTKKGKKKKQYKSNTEAELDLFLKRYLLFQLRWNDALN--QRMIENIKVYCLLLRLINPSKIAISSIQRREMSLDIMLIQKNLTLTELMKKGILIIEPIRLSVKNNGQFIMYQTIGISLVHKSKHQTNQRYPEQRYVDKKNFDEFILQPQTQRINTDKNHFDLLVPENILWSRRRRELRIRSLFNSLNWNGIDRNSVFCNENNVKNWSQFLDERKPL 1848
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_NICSY (Putative membrane protein ycf1 OS=Nicotiana sylvestris GN=ycf1-A PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.301e-64 Identity = 139/280 (49.64%), Postives = 185/280 (66.07%), Query Frame = -2 Query: 2 ISPTQKEYF------ELSNQSKEENELADQGTPR--SDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVLDKNKNL 811 I+ QK+ F ++ N+ +E E A QG SD + + LG VLS + +++Y SD K KKKQ K TE +LD FLKRYL QLRW A++ ++++ +++VYC L+RLINPS +AI+SIQR EMSL I++ +K L EL K G+LIIEP RLSVKN+GQF +YQ +GI+LVHK+K + +RY E+ YVDKK+FDEFI + Q N +KNH+DLLVPE IL +RRRELR FNS N NG+ +N VF NN K + LD+ K L Sbjct: 1571 INKNQKQNFFLRSNKKIKNRIQEAKEPASQGEKERGSDIENKGNLGPVLSKHQNALKKDYAESDTKKGKKKKQYKSNTEAELDLFLKRYLLFQLRWNDALN--QRMIENIKVYCLLLRLINPSKIAISSIQRREMSLDIMLIQKNLTLTELMKKGILIIEPIRLSVKNNGQFIMYQTIGISLVHKSKHQTNQRYPEQRYVDKKNFDEFILQPQTQRINTDKNHFDLLVPENILWSRRRRELRIRSLFNSLNWNGIDRNSVFCNENNVKNWSQFLDERKPL 1848
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_ILLOL (Putative membrane protein ycf1 OS=Illicium oligandrum GN=ycf1 PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.454e-63 Identity = 138/275 (50.18%), Postives = 185/275 (67.27%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQ--SKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGG---GRVLDKNKNL 811 IS QKE+ EL Q++EE + D+ P SDAQ Q KD EE+ T SD K R KKK+ SK E +LDFFLKRY QLRW ++ +K +N+++VYC L+RL++P ++A+ASIQRGEM L + +K A+ EL K G+LI+EP RLS+K DGQF +YQ +GI+LVHK+K K +R +EK YVD+ FD I +H KM NR+K +YDLLVPE IL +RRRELR LI FNS+N+N + +NPVF NG G + +D++K+L Sbjct: 1569 ISYNQKEHLELETQNQEEKKRQDKKNPGSDAQNQ-----------KDVEEDSTRSDSKKRSKKKKPKSKSNKEAELDFFLKRYFLFQLRWDDPLN--QKRINNIKVYCLLLRLMDPKEIALASIQRGEMCLAAMKIQKDLAVTELIKKGILILEPVRLSIKWDGQFIMYQTIGISLVHKSKHKTNRRCREKRYVDENYFDISIEQHGKMLVNRDKKNYDLLVPENILSLRRRRELRILIRFNSENRNIVNRNPVFL-NGNGSHNCEQFVDRDKHL 1829
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_PANGI (Putative membrane protein ycf1 OS=Panax ginseng GN=ycf1 PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 3.205e-63 Identity = 129/268 (48.13%), Postives = 188/268 (70.15%), Query Frame = -2 Query: 8 QKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRET--EVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN--NGKGGGRVLDKNK 799 +K+ FEL N+++EE E AD+G SDAQ Q VLSNQ+KD EE+Y +K KKQSK ++ +V+L+ LK++L QLR+ + +++++N+++V C L+ L NP ++ ++SIQ E+SL I++ +K ++EL K G+LIIEP RLSVK DGQF +YQ +GI+L+HK+K + +RY+E+ Y+DKK FDE ++Q+ TGNR+KNHYD LVPE IL +RRRELR LI FNS+++ G+ NPVF N N K LD++K Sbjct: 1601 EKKIFELKNRNQEEKEPADRGDLGSDAQNQGNRRFVLSNQQKDIEEDYAKLVLKRGKTKKQSKNKSNVKVELNALLKQHLLFQLRYDEGL--KQRMINNLKVSCLLIGLKNPRNITVSSIQNREISLDIMLIRKSLTVRELMKRGVLIIEPIRLSVKKDGQFIMYQTIGISLIHKSKYQTNQRYREQRYIDKKKFDESTPRYQRRTGNRDKNHYDFLVPEKILSSRRRRELRILIHFNSRSRKGVDSNPVFCNKKNIKSRSPFLDESK 1866
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_ATRBE (Putative membrane protein ycf1 OS=Atropa belladonna GN=ycf1-A PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 3.205e-63 Identity = 134/280 (47.86%), Postives = 186/280 (66.43%), Query Frame = -2 Query: 2 ISPTQKEYF------ELSNQSKEENELADQGTPR--SDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN--NGKGGGRVLDKNKNL 811 I+ QK+ F ++ N+ +E E A+QG SD + +V G VLS + D E++Y SD K KKKQ K TE +LD FLKRYL QL+W ++ ++++ +++VYC L+RLINP+ ++I+S+QRGEMSL I++ + L EL K G+LIIEP RLSVKN+GQF +YQ +GI+LVHK+K + +RY+++ YVDKK+FDE I + Q N +KNH+DLLVPE IL +RRRELR FNS N NG+ +N VF N N K + LD+ K L Sbjct: 1550 INKNQKQNFFLPSNKKIKNRIQEAKEPANQGERERGSDIENKVNPGPVLSKHQNDLEKDYAESDTKKSKKKKQYKSNTEAELDLFLKRYLLFQLKWNDDLN--QRMIENIKVYCLLLRLINPTKISISSVQRGEMSLDIMLIQGNLTLTELMKKGILIIEPIRLSVKNNGQFIMYQTIGISLVHKSKHQTNQRYRDQRYVDKKNFDESILQPQTQRINTDKNHFDLLVPENILWSRRRRELRIRSFFNSLNWNGVDRNSVFCNETNVKNWSQFLDERKPL 1827
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_ARAHI (Putative membrane protein ycf1 OS=Arabis hirsuta GN=ycf1-A PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 9.325e-63 Identity = 135/270 (50.00%), Postives = 171/270 (63.33%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 811 I +K N +KEENEL QG SD +K+ S LSNQEK+ E+NY S +K R KKQ K TE +L FL RY QLRW F +KILN+++VYC LVRL NP+++AI+SI+RGE+SL IL+ +K F +L K G+LIIEP RLSVKNDGQ +Y+ VGI+LVHKNK+KI+KRY++K Y+DK KN+YD +PE IL PKRRRE R LICFN K +N +N F N + VL K K+L Sbjct: 1476 IPSNEKGPLRFFNLNKEENELVGQGELESDNEKKRNPESALSNQEKNIEKNYAESKIKKRQNKKQYKSHTEAELYLFLTRYSRFQLRWN--CFFNQKILNNIKVYCLLVRLKNPNEIAISSIERGELSLDILMIEKNFTFSKLMKKGILIIEPVRLSVKNDGQLIIYRTVGISLVHKNKQKISKRYKKKSYIDK------------------KNNYDFFIPENILSPKRRREFRILICFNLKKKNARDRNSRFDKNIQNLTTVLHKKKDL 1725
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_COFAR (Putative membrane protein ycf1 OS=Coffea arabica GN=ycf1 PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.591e-62 Identity = 134/273 (49.08%), Postives = 178/273 (65.20%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSV---LSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 811 + P+ K+ + KE+ ADQ RSDAQKQ LGSV + QEKD EE+Y S +K KKKQ K +TE +LDFFLKRYL QLRW A++ ++++N++++YC L+RLINP + I+SIQR EMSL I++ +K +L EL K G+L+IEP RLSVKNDGQF +YQI+GI++VHKNK + + Y+E+ YVD KN +DLLVPE IL + RRELR LICF SKN+N + KN VF ++LDK K+L Sbjct: 1571 VIPSNKQIKNKNQNQKEKETPADQEDLRSDAQKQGNLGSVPPTKTKQEKDNEEDYAVSKIKAGKKKKQYKSKTEAELDFFLKRYLVFQLRWGDALN--QRMINNVKIYCLLLRLINPRKITISSIQRREMSLDIMLIQKNLSLTELIKRGVLVIEPDRLSVKNDGQFIMYQILGISVVHKNKHQTNQGYREQTYVD-------------------KNRFDLLVPENILSTRCRRELRILICFTSKNRNSVDKNSVFCTK-NNSSQLLDKRKDL 1821
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_DIOEL (Putative membrane protein ycf1 OS=Dioscorea elephantipes GN=ycf1 PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 3.543e-62 Identity = 125/258 (48.45%), Postives = 171/258 (66.28%), Query Frame = -2 Query: 38 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGK 811 IS QKEY E N ++E+NE QG RSD +KQ ++KD EEN+T S++K KKKQSK E +L FFLK+YL QLRW S ++++++++VYC L+RLIN ++ I+SIQRGEM L +++ +K AL EL K G+LIIEP RL ++ + +YQ +GI+L++KN+ +Y +K YVDKK FD +I ++ M N +KNHYD VPE IL P+RRRELR LICFNS N N + +NP F N K Sbjct: 1549 ISSNQKEYLEFENSNQEKNEQQGQGDLRSDLRKQ---------KKKDVEENHTKSEIKKHKKKKQSKSNKEAELYFFLKKYLLFQLRWDD--SLNQRMIDNIKVYCLLLRLINTKEIVISSIQRGEMCLDVMLIQKDLALTELIKKGILIIEPIRLFLERGVKLIIYQTIGISLINKNQTN--GKYLKKRYVDKKSFDRYIGRYNNMLANGDKNHYDFFVPENILSPRRRRELRILICFNSCNWNVVDRNPAFCNENK 1793
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_CHLSC (Putative membrane protein ycf1 OS=Chloranthus spicatus GN=ycf1-A PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 3.543e-62 Identity = 134/273 (49.08%), Postives = 182/273 (66.67%), Query Frame = -2 Query: 5 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRI--KKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVLDKNKN 811 IS QKEY + Q+ EE EL Q SD + NQ+K EE+YTGSD+K R KKK SK EV+LDFFLKRYL QLRW S ++I+N++++YC L+RLINP+++AI+SIQ+GEM L ++ +K A EL K G+ IIEP RLS+K DG F++YQ VGI+LVHK+K +I +RY+EK YVD+ F+ A+H K+ N ++NHYDLL PE I +RR+E+R LI FNS N N + +NPVF NN + + D++K+ Sbjct: 1568 ISSNQKEYLD---QNHEEKELLGQEDCGSDPR----------NQQKYIEEDYTGSDIKKRRSRKKKLSKSNEEVELDFFLKRYLFFQLRWD--YSLDQRIINNIKIYCLLLRLINPNEIAISSIQKGEMFLDVMAIQKDLAFTELRKKGIFIIEPLRLSIKWDGPFYMYQTVGISLVHKSKHQINRRYREKRYVDQNHFNRSTAQHGKILVNGDENHYDLLFPEKIPSTRRRKEMRILISFNSGNGNVVNRNPVFLNGNNVRNCSQFFDEDKH 1825 The following BLAST results are available for this feature:
BLAST of CX069842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069842 ID=CX069842; Name=CX069842; organism=Citrus sinensis; type=EST; length=812bpback to top |