CX069842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_LOBMA (Putative membrane protein ycf1 OS=Lobularia maritima GN=ycf1-A PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.442e-55 Identity = 121/270 (44.81%), Postives = 159/270 (58.89%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 811 I K++ E N +KEE E A QG SD +K+ L S LS QEK+ EENY +K KKQ K TEV++D F+ R Q+RW F +KI+ ++VYC LVRL NP+++ ++SI+RGE++ IL+ K +L K GM + EP RLS+KNDGQ +Y+ +GI+LVHK K KI+KRY++K Y+DK KN+ D VPE IL PKRRRE R LICFN K +N +N F N VL K KNL Sbjct: 1473 IPSNAKKFLEFFNLNKEEKESAGQGERESDNEKKKNLESALSKQEKNIEENYAELKIKKHKTKKQHKSNTEVEIDSFMGRDSRFQMRWNSF--FNKKIITTLKVYCFLVRLKNPNEIILSSIERGEINPDILLISKTLPFSQLLKKGMWVFEPVRLSLKNDGQLIIYRTIGISLVHKKKNKISKRYKKKSYIDK------------------KNNCDFFVPENILSPKRRREFRILICFNLKKKNARDRNSRFDKNIPNLTTVLHKKKNL 1722
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_NYMAL (Putative membrane protein ycf1 OS=Nymphaea alba GN=ycf1 PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.883e-55 Identity = 117/269 (43.49%), Postives = 166/269 (61.71%), Query Frame = -2 Query: 5 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKN 811 + QK Y EL N++++E E QG SD + N++KD N GSD+K R KKK+ K + E +LD FLK+Y QLRW F + + N+++VYC L+RL+NP+++AI+SIQ GEM L +++ + F+L EL K G+ +IEP RLS+K DG +YQ + I+L HK + + + YQ K Y+DK F+ IA+H + N + N+YDLLVPE IL P RRELR L FN +N+N + KNPVF N K + +K N Sbjct: 1643 VESNQKGYLELENRNRDEKERQHQGNLISD----------IRNKKKDVGANSAGSDIKKRRKKKKFKSKKEAELDLFLKKYFIFQLRWDDP--FNKGMNNNIKVYCLLLRLMNPNEIAISSIQSGEMGLDVMLINRGFSLPELIKKGIFLIEPVRLSIKRDGISIMYQTIAISLTHKIQHQTNQGYQLKKYIDKNYFNGSIARHGGVRVNGDNNNYDLLVPEHILSPSHRRELRILSRFNYRNRNLVNKNPVFCNRAKTNAQGFEKFVN 1899
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_AETGR (Putative membrane protein ycf1 OS=Aethionema grandiflora GN=ycf1-A PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.221e-54 Identity = 119/251 (47.41%), Postives = 162/251 (64.54%), Query Frame = -2 Query: 2 ELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 754 E ADQG SD +KQ L NQEK+ EENY S +K KKQ K TEV+LD FL RY QLRW ++ KILN++++YC LVRL NP+++AI+SI+R EM+L +L+ +K F +L K G+LIIEP RLSVKNDGQ +Y+ +GI+LVHKN +I++R +KK ++ I K++K T NR K + D PE +L PKRRRE R LIC K ++ +N F N + G+VL++ K+L Sbjct: 1496 ESADQGELESDNEKQRNPELALPNQEKNIEENYAESKIKKPENKKQYKPNTEVELDLFLTRYSRFQLRWNFFLN--TKILNNIKIYCLLVRLKNPNEIAISSIERAEMNLDLLMIEKNFTFAKLMKKGILIIEPLRLSVKNDGQLIIYRTIGISLVHKNNHQISQR-------EKKKIEKAITKYKKKTVNRKKKNSDFFAPENLLSPKRRREFRILICSKFKTKSTRYRNSRFDKNIQNCGQVLNQKKDL 1737
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_AETCO (Putative membrane protein ycf1 OS=Aethionema cordifolium GN=ycf1-A PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.719e-54 Identity = 124/270 (45.93%), Postives = 165/270 (61.11%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 811 I +K+Y N + +E E KQ L NQEK+ EENY S +K R KKQ K TEV+LD FL RY QLRW ++ +KILN++++YC LVRL NP+ +AI+SI+RGEMSL IL+ +K +L K G+LIIEP R SVKNDGQ +Y+ +GI+LVHKN +I++R DKK ++ I + +K T NR KN+YD VPE IL PKRRRE R LIC K ++ +N F N + G+VL++ K L Sbjct: 1472 IPSNEKKYLRFYNLTNDEKE------------KQRNPQLALPNQEKNIEENYAESKIKKRQNKKQYKSNTEVELDLFLTRYSRFQLRWNFFLN--KKILNNVKIYCLLVRLKNPNKIAISSIERGEMSLDILMIEKNLTFAKLMKKGILIIEPLRSSVKNDGQLIIYRTIGISLVHKNNHQISQR-------DKKKIEKSITQLKKKTVNRKKNNYDFFVPEKILSPKRRREFRILICSKLKKKSTRYRNSRFDKNIQNCGQVLNQTKYL 1720
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1B_PIPCE (Putative membrane protein ycf1 C-terminal part OS=Piper cenocladum GN=ycf1 PE=5 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.949e-52 Identity = 119/253 (47.04%), Postives = 161/253 (63.64%), Query Frame = -2 Query: 38 KEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGK 796 K+Y N ++EE E Q RS+AQ Q Q+ E++Y SD++ K QSK E +LD FLK+YL QLRW S +K++++++VY L+RL NP ++AI+SIQRGEM L +++ +K L L KGG+L+IEP RL +K D QFF+YQIVGI+LVHK+K++I R + K YVDK DFD + K ++ HYDLLVPE IL P+RRRELR L+ FNS +N M + P F NGK Sbjct: 1227 KKYPVFKNINQEEKEGQGQEVLRSNAQNQ---------QKSFIEKDYKESDIQKPRTKAQSKNNKETELDSFLKKYLLFQLRWNN--SLNQKVIDNIKVYSLLLRLKNPREIAISSIQRGEMRLDVMLFQKDITLSGLIKGGLLVIEPIRLYLKWDFQFFMYQIVGISLVHKDKQQIKTRCRIKEYVDKMDFDGSFLPYGKTLVKGHEKHYDLLVPEHILSPRRRRELRILMSFNSGKENIMGRGP-FILNGK 1467
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_SPIOL (Putative membrane protein ycf1 OS=Spinacia oleracea GN=ycf1-A PE=3 SV=2) HSP 1 Score: 204.912 bits (520), Expect = 4.342e-52 Identity = 120/272 (44.12%), Postives = 168/272 (61.76%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGS-DMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKIT-KRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 811 I +K+ FEL N++++E EL K+ + V N EKD EE+Y D+K IK+KQ K E + D FLKRYL QL+W A S EK+++++QVYC ++RLINP ++ I+SI+R E+S+ I++ +K F + +LIIEP RLS++ DGQF LYQ +GI+LVHK+K + KRY E VDK K G RNKN++DLL PE +L P+RRRELR L+C NS+N NG+ NP+ N K + D+ K+L Sbjct: 1537 IPSNEKKSFELENRNQDEKELVS---------KEDLGSYVQENYEKDIEEDYISFIDIKKPIKQKQPKSVIEAEFDLFLKRYLLFQLKW--ADSLNEKLMDNIQVYCLVLRLINPIEILISSIERKELSMDIMLDRKDFNCPNWKQKRVLIIEPIRLSIRGDGQFLLYQTIGISLVHKSKHQNNQKRYSEN--VDK-----------KFLGERNKNNFDLLAPENLLSPRRRRELRILLCLNSRNNNGVNTNPM-ENRVKNCNQFFDEKKDL 1783
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_SOYBN (Putative membrane protein ycf1 OS=Glycine max GN=ycf1-A PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.634e-49 Identity = 111/273 (40.66%), Postives = 164/273 (60.07%), Query Frame = -2 Query: 38 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTR---IKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFAL----------KELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFI--AKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGK 811 +S +K E EL + +++ Q L S +SNQEKD E +Y GSD + IKKK+ K + E +L+F L+ +L L L W + ++I N+++VYC L+RL N ++ IASIQRGE+ L I++ + + L + K + +IEP RLS KN+ QFF+YQ +G++L+ KNKRKI +Y EK +V+KK+F ++I + QK+T + K++ DLLVPE IL +RRRELR LIC N N N M +N +F+N K Sbjct: 1454 VSENKKNITRKKKNESLELELETRNRAKAEYPDQRNLESSISNQEKDIENDYVGSDSEKNSKGIKKKKDKNKMEAELNFLLRNFLILHLNWNNFLG--QRIFNNVKVYCLLIRLKNLREITIASIQRGELGLDIMMIQNQKNLILLGLRKKKNNKFMKKEIFVIEPVRLSRKNNKQFFMYQTIGLSLIQKNKRKIYHKYPEKIHVNKKNFYKYITRTRDQKITEKKEKDNSDLLVPENILSARRRRELRILICLNPNNINSMHRNTIFYNPNK 1724
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_DAUCA (Putative membrane protein ycf1 OS=Daucus carota GN=ycf1 PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.888e-47 Identity = 113/272 (41.54%), Postives = 164/272 (60.29%), Query Frame = -2 Query: 2 QKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRW---RGAV-SFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN--NGKGGGRVLDKNKNL 799 +K Y+EL N+++EE + A + RS AQ NQ+K MK + K + R ++ F K YL Q W G + E+++N++++YC+L+ L NP D I+SIQR E++L I++ ++K EL K G+ ++P RLSVKNDG F +YQ VGI+LVHK+K + +RY+E+ Y++KK DE I ++Q + R+K HYD +VPE IL +RRRELR L+ FNSKN N + KNPVF N N K LD+ K+L Sbjct: 1529 EKIYYELMNRNQEEKKTAGRRGLRSYAQ----------NQDK----------MKKKYKIRNKMRR---EIIFLRKHYLLFQ--WIIDDGLIPKLTERMINNIKIYCYLLGLRNPRDTTISSIQRKELNLDIMVIRQKLTPIELNKKGIFFLDPTRLSVKNDGYFIIYQTVGISLVHKSKYQTPQRYREQRYINKKKLDESIPRYQIILRKRDKKHYDFVVPENILSSRRRRELRILLSFNSKNLNSVDKNPVFCNKKNIKRRNPFLDQKKHL 1775
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_RANMC (Putative membrane protein ycf1 OS=Ranunculus macranthus GN=ycf1 PE=3 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 7.173e-47 Identity = 104/255 (40.78%), Postives = 157/255 (61.57%), Query Frame = -2 Query: 47 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 811 IS + + +L N+++EE + +G S QK+ GS ++ DG+E++ S+++ I KK+SK +LDFFLK+Y QLRW SF EKI+N++++YC L+RL NP ++AI+SIQR EMS+ +++ K +L K +L+IEP RLS+ DG F +YQ + I VH +K + K+ K VD K E +A+H+ + NR+KN+YD L+PE +L +RRRELR IC N +N +N F N Sbjct: 1473 ISYNKNKSLDLENRNQEETQQPVRGDLGSYVQKENNPGSDPLKKQTDGKEDFDRSNIQRNINKKKSKSNIAAELDFFLKKYFLFQLRWDN--SFSEKIINNIKIYCLLLRLKNPKEIAISSIQRDEMSMDVMLVPKATTFIKLRKRRLLLIEPARLSINWDGLFIMYQTLVILQVHNSKYQTCKK---KINVDNKGLIESMARHEILFRNRDKNNYDFLIPENLLSSRRRRELRIQICLNLRNFKVGDRNREFSN 1722
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_AMBTC (Putative membrane protein ycf1 OS=Amborella trichopoda GN=ycf1 PE=3 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 2.307e-45 Identity = 114/284 (40.14%), Postives = 165/284 (58.10%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQE--------KDG----EENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGK--GGGRVLDKNKNL 811 I QK+Y EL + +EE + DQ R D + Q GS + NQ+ ++G +E+YT D+ KKKQSK E +LD LKRYL Q RW S ++K++N++++Y L+RL++P + I+SIQRGEM L I++ K L +L KGG+ +EP RLS K +GQF +YQ + I+LVHK K++ +RY+E Y+D+ FD FI ++ ++ N + +YDL VPE I +RRRELR L N N N +F N K LD+ K+L Sbjct: 1465 ILSNQKKYLELGTRDREEKKWWDQEDLRPDTKYQEYFGSDVKNQKDVELDVWYREGKSREQEDYT--DINKSRKKKQSKSNKEAELDLLLKRYLLFQFRWDD--SLKKKMINNIKLYSLLLRLMDPKKIVISSIQRGEMWLDIMLIHKDLPLTKLKKGGVFTMEPLRLSRKWNGQFLMYQTLSISLVHKIKQQTDRRYRETKYIDENFFDLFIPRNGRVFVNGDNKNYDLFVPENISALRRRRELRILSRLNPGKGN---INIIFSNRKKIQNCKPFLDRGKHL 1741 The following BLAST results are available for this feature:
BLAST of CX069842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069842 ID=CX069842; Name=CX069842; organism=Citrus sinensis; type=EST; length=812bpback to top |