CX069822

Overview
NameCX069822
Unique NameCX069822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length299
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9247 contig Csv1_Contig9247:216..514. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069822 vs. ExPASy Swiss-Prot
Match: G3P_COCIM (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides immitis GN=GPD PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.854e-17
Identity = 48/99 (48.48%), Postives = 61/99 (61.62%), Query Frame = 1
Query:    1 LKYDSVHGHWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 297
            LKYDS HG +K  ++K  D    + G K V  +  R+P  IPWA+TGA+YV+ESTGVFT               V+ISAPS DAPMFV+GVN + YK +
Sbjct:   46 LKYDSTHGRFK-GDVKFSDNGLDVDG-KHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNETYKSD 142          
BLAST of CX069822 vs. ExPASy Swiss-Prot
Match: G3P2_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agaricus bisporus GN=gpd2 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.854e-17
Identity = 48/98 (48.98%), Postives = 61/98 (62.24%), Query Frame = 1
Query:    4 KYDSVHGHWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 297
            KYDSVHG +K   ++VK+   ++ G +P+ VF  R+P  IPW   GA+YVVESTGVFT               VVISAPS DAPM+V GVN  +Y P+
Sbjct:   46 KYDSVHGRFK-GTVEVKNGSFVVDG-RPMKVFAERDPAAIPWGSVGADYVVESTGVFTTIDKASAHLKGGAKKVVISAPSADAPMYVCGVNLDKYNPK 141          
BLAST of CX069822 vs. ExPASy Swiss-Prot
Match: G3P_CRYPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryphonectria parasitica PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.421e-17
Identity = 46/96 (47.92%), Postives = 60/96 (62.50%), Query Frame = 1
Query:    1 LKYDSVHGHWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 288
            LKYDS HG++K +     +   L+ G K V  +  R+P  IPW++TGA+Y+VESTGVFT               V+ISAPS DAPM+V+GVNEK Y
Sbjct:   46 LKYDSQHGNFKGDV--TVEGSDLVVGGKKVRFYTERDPAAIPWSETGADYIVESTGVFTTTEKAKAHLKGGAKKVIISAPSADAPMYVMGVNEKTY 139          
BLAST of CX069822 vs. ExPASy Swiss-Prot
Match: G3P_SCHCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Schizophyllum commune GN=GPD PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.162e-17
Identity = 47/95 (49.47%), Postives = 59/95 (62.11%), Query Frame = 1
Query:    4 KYDSVHGHWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 288
            KYD+VHG +K   ++VKD K ++ G   + VF  +NP +I W   GA+Y+VESTGVFT               VVISAPS DAPMFVVGVN  +Y
Sbjct:   47 KYDTVHGRYK-GTVEVKDGKLVVDGHA-ITVFAEKNPADIKWGSAGADYIVESTGVFTTVEKASLHLQGGAKKVVISAPSADAPMFVVGVNLDKY 139          
BLAST of CX069822 vs. ExPASy Swiss-Prot
Match: G3P_CHICK (Glyceraldehyde-3-phosphate dehydrogenase OS=Gallus gallus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 3.162e-17
Identity = 46/95 (48.42%), Postives = 59/95 (62.11%), Query Frame = 1
Query:    4 KYDSVHGHWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 288
            KYDS HGH+K   +K ++ K ++ G   + +F  R+P  I WA  GAEYVVESTGVFT               V+ISAPS DAPMFV+GVN ++Y
Sbjct:   46 KYDSTHGHFK-GTVKAENGKLVINGHA-ITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138          
BLAST of CX069822 vs. ExPASy Swiss-Prot
Match: G3P_AJECA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ajellomyces capsulata GN=GPD PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.162e-17
Identity = 49/98 (50.00%), Postives = 56/98 (57.14%), Query Frame = 1
Query:    1 LKYDSVHGHWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKP 294
            LKYDS HG +K   + V      + G K V  +  R+P  IPW K G EYVVESTGVFT               V+ISAPS DAPMFV+GVNEK Y P
Sbjct:   46 LKYDSTHGQFK-GTIDVNSNGLTVNG-KAVTFYQERDPASIPWGKHGVEYVVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNEKTYDP 141          
BLAST of CX069822 vs. ExPASy Swiss-Prot
Match: G3P_LACDT (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Lactarius deterrimus GN=GPD PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.394e-17
Identity = 47/95 (49.47%), Postives = 58/95 (61.05%), Query Frame = 1
Query:    4 KYDSVHGHWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 288
            KYDSVHG +K   +++KD K ++ G  P+ VF  R+P  I W   GA+YVVES+GVFT               V+ISAPS DAPMFVVGVN   Y
Sbjct:   26 KYDSVHGRFK-GTVEIKDGKLVIDGH-PITVFQERDPANIQWGSVGADYVVESSGVFTTVDKASAHLKGGAKKVIISAPSADAPMFVVGVNLDAY 118          
BLAST of CX069822 vs. ExPASy Swiss-Prot
Match: G3P_FELCA (Glyceraldehyde-3-phosphate dehydrogenase OS=Felis catus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 5.394e-17
Identity = 45/95 (47.37%), Postives = 59/95 (62.11%), Query Frame = 1
Query:    4 KYDSVHGHWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 288
            +YDS HG + H  +K ++ K ++ G KP+ +F  R+P  I W   GAEYVVESTGVFT               V+ISAPS DAPMFV+GVN ++Y
Sbjct:   46 QYDSTHGKF-HGTVKAENGKLVING-KPITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138          
BLAST of CX069822 vs. ExPASy Swiss-Prot
Match: G3P_COCP7 (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides posadasii (strain C735) GN=GPD PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.394e-17
Identity = 47/99 (47.47%), Postives = 61/99 (61.62%), Query Frame = 1
Query:    1 LKYDSVHGHWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 297
            LKYDS HG +K  ++K  +    + G K V  +  R+P  IPWA+TGA+YV+ESTGVFT               V+ISAPS DAPMFV+GVN + YK +
Sbjct:   46 LKYDSTHGRFK-GDVKFSENGLDVDG-KHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNETYKSD 142          
BLAST of CX069822 vs. ExPASy Swiss-Prot
Match: G3P_CLAPU (Glyceraldehyde-3-phosphate dehydrogenase OS=Claviceps purpurea GN=GPD-1 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.394e-17
Identity = 49/96 (51.04%), Postives = 58/96 (60.42%), Query Frame = 1
Query:    1 LKYDSVHGHWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 288
            LKYDS HG +K  E+K KD   L+   K V     R+P  IPW  +GAEY+VESTGVFT               V+ISAPS DAPM+V+GVNEK Y
Sbjct:   46 LKYDSSHGVFK-GEIK-KDADGLIVNGKKVKFHTERDPSAIPWKASGAEYIVESTGVFTTTEKAKAHLTGGAKKVIISAPSADAPMYVMGVNEKTY 139          
The following BLAST results are available for this feature:
BLAST of CX069822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
G3P_COCIM1.854e-1748.48Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P2_AGABI1.854e-1748.98Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agar... [more]
G3P_CRYPA2.421e-1747.92Glyceraldehyde-3-phosphate dehydrogenase OS=Crypho... [more]
G3P_SCHCO3.162e-1749.47Glyceraldehyde-3-phosphate dehydrogenase OS=Schizo... [more]
G3P_CHICK3.162e-1748.42Glyceraldehyde-3-phosphate dehydrogenase OS=Gallus... [more]
G3P_AJECA3.162e-1750.00Glyceraldehyde-3-phosphate dehydrogenase OS=Ajello... [more]
G3P_LACDT5.394e-1749.47Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_FELCA5.394e-1747.37Glyceraldehyde-3-phosphate dehydrogenase OS=Felis ... [more]
G3P_COCP75.394e-1747.47Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P_CLAPU5.394e-1751.04Glyceraldehyde-3-phosphate dehydrogenase OS=Clavic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13A08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13A08-A15-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069822 ID=CX069822; Name=CX069822; organism=Citrus sinensis; type=EST; length=299bp
CTTAAGTACGATAGTGTTCACGGTCATTGGAAGCACAACGAGTTGAAGGT
CAAGGACGAGAAGACCCTCCTCTTCGGTGAGAAGCCAGTCGCTGTTTTCG
GATTCAGGAACCCAGAGGAGATCCCATGGGCAAAGACTGGAGCCGAGTAT
GTTGTGGAATCAACTGGAGTGTTCACTGACAAGGACAAGGCTGCTGCTCA
CTTGAAGGGTGGTGCCAAGAAGGTCGTTATCTCCGCCCCTAGCAAGGATG
CTCCCATGTTTGTTGTGGGCGTCAACGAGAAAGAATACAAGCCAGAGCT
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