EY720328

Overview
NameEY720328
Unique NameEY720328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODM_HAEDU (Superoxide dismutase [Mn] OS=Haemophilus ducreyi GN=sodA PE=3 SV=4)

HSP 1 Score: 152.525 bits (384), Expect = 2.826e-36
Identity = 89/205 (43.41%), Postives = 115/205 (56.10%), Query Frame = 2
Query:  140 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD-------TSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTLV---PLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDWKYAS 721
            T  LP+L Y Y ALEP    E M++HH KHHQAYV N N  +E+  + L K         T    + + A++ N GGHVNH++FWK L       G     +L  AI   FGS+EA   +     A   GSGW WL L  E  +L V +TANQD P++ K    V   P+  +DVWEHAYYL Y+N +PDY+K  WNV++W  AS
Sbjct:    2 TYQLPELGYAYDALEPYFDKETMEIHHSKHHQAYVNNSNALLEKHPELLEKCPGALLKDLTQVPAEKRTAVRNNLGGHVNHTLFWKGLKT-----GTTLQGALKDAIIRDFGSVEAFQAEFEQAAATRFGSGWAWLVL--EEGKLAVVSTANQDSPIMGKDVAGVSGYPIFTLDVWEHAYYLHYQNRRPDYIKAFWNVVNWDEAS 199          
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODM_STRAG (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae GN=sodA PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 4.820e-36
Identity = 82/202 (40.59%), Postives = 120/202 (59.41%), Query Frame = 2
Query:  143 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE---QLFQALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDWKYASDVY 730
            + LPDLPY Y ALEP I  E M LHH KHH  YV N N A+E   ++ + L  +  D S + + ++ A+  NGGGH+NH++FW+ ++P      +     L   I+  FGS E      +A      GSGW WL ++ E K L V +TANQD  + +     P+LG+DVWEHAYYL Y+NV+P+Y+K  + +++W   +++Y
Sbjct:    3 IILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQ----ELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELY 197          
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODM_STRA5 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype V GN=sodA PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 4.820e-36
Identity = 82/202 (40.59%), Postives = 120/202 (59.41%), Query Frame = 2
Query:  143 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE---QLFQALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDWKYASDVY 730
            + LPDLPY Y ALEP I  E M LHH KHH  YV N N A+E   ++ + L  +  D S + + ++ A+  NGGGH+NH++FW+ ++P      +     L   I+  FGS E      +A      GSGW WL ++ E K L V +TANQD  + +     P+LG+DVWEHAYYL Y+NV+P+Y+K  + +++W   +++Y
Sbjct:    3 IILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQ----ELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELY 197          
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODM_STRA3 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype III GN=sodA PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 4.820e-36
Identity = 82/202 (40.59%), Postives = 120/202 (59.41%), Query Frame = 2
Query:  143 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE---QLFQALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDWKYASDVY 730
            + LPDLPY Y ALEP I  E M LHH KHH  YV N N A+E   ++ + L  +  D S + + ++ A+  NGGGH+NH++FW+ ++P      +     L   I+  FGS E      +A      GSGW WL ++ E K L V +TANQD  + +     P+LG+DVWEHAYYL Y+NV+P+Y+K  + +++W   +++Y
Sbjct:    3 IILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQ----ELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELY 197          
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODM_STRPY (Superoxide dismutase [Mn] OS=Streptococcus pyogenes GN=sodA PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 6.295e-36
Identity = 79/202 (39.11%), Postives = 123/202 (60.89%), Query Frame = 2
Query:  143 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE---QLFQALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDWKYASDVY 730
            + LP+LPY Y ALEP    E M LHH KHH  YV N + A+E   ++ + L ++  D   + + ++ A+  NGGGH+NH++FW+ L+P  +         +  AID  FGS +A  ++ +A      GSGW WL ++ E  +L + +TANQD  +++     P+L +DVWEHAYYL Y+NV+P+Y+K  + +++WK  S +Y
Sbjct:    3 IILPELPYAYDALEPQFDAETMTLHHDKHHATYVANTDAALEKHPEIGENLEELLADVPKIPEDIRQALINNGGGHLNHALFWELLSPEKQD----VTPDVAQAIDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVNKE-GQLEITSTANQDTPISEGKK--PILALDVWEHAYYLNYRNVRPNYIKAFFEIINWKKVSALY 197          
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODM_STRMU (Superoxide dismutase [Mn/Fe] OS=Streptococcus mutans GN=sodA PE=1 SV=3)

HSP 1 Score: 150.984 bits (380), Expect = 8.221e-36
Identity = 83/202 (41.09%), Postives = 118/202 (58.42%), Query Frame = 2
Query:  143 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT--STVVQLQGAIK----FNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDWKYASDVY 730
            + LPDLPY Y ALEP I  E M LHH KHH  YV N N A+E+  +    ++   + V Q+   I+     NGGGH+NH++FW+ L+P          + +  AI+  FGS +      +A      GSGW WL +D E K L V +TANQD  +++   L P+L +DVWEHAYYL Y+NV+P+Y+K  + V++W   + +Y
Sbjct:    3 ILLPDLPYAYDALEPYIDAETMTLHHDKHHATYVANANAALEKHPEIGENLEVLLADVEQIPADIRQSLINNGGGHLNHALFWELLSPEK----TKVTAEVAAAINEAFGSFDDFKAAFTAAATTRFGSGWAWLVVDKEGK-LEVTSTANQDTPISQG--LKPILALDVWEHAYYLNYRNVRPNYIKAFFEVINWNTVARLY 197          
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODF_AERPE (Superoxide dismutase [Mn/Fe] OS=Aeropyrum pernix GN=sod PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.402e-35
Identity = 80/187 (42.78%), Postives = 106/187 (56.68%), Query Frame = 2
Query:  149 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDW 709
            LP LPY+Y+ALEP I  EIM+LHHQKHH  YV   N A+E++ + L       V  +     FN  GH+ H+IFW N+AP  +GGG  P   +   I+  FG  E      SA    ++G GW  L  D   + L +      + L+T    LVP+L IDVWEHAYYL YKN +  Y++N WNV++W
Sbjct:    9 LPPLPYNYNALEPYIIEEIMKLHHQKHHNTYVKGANAALEKIEKHLKGEIQIDVRAVMRDFSFNYAGHIMHTIFWPNMAPPGKGGG-TPGGRVADLIEKQFGGFEKFKALFSAAAKTVEGVGWGVLAFDPLTEELRILQVEKHNVLMTAG--LVPILVIDVWEHAYYLQYKNDRGSYVENWWNVVNW 192          
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODF_STRCO (Superoxide dismutase [Fe-Zn] 1 OS=Streptomyces coelicolor GN=sodF1 PE=1 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 1.832e-35
Identity = 81/197 (41.12%), Postives = 112/197 (56.85%), Query Frame = 2
Query:  134 LQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPH----SSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDWK 712
            +   TLP+LPYDYSAL P IS EI++LHH KHH AYV   N  +EQL +A +K    ++  L+  + F+  GH+ HSI+W N+    +GGGEP        L  AI   FGS      +++   A  QGSGW  L  +    RL+VE   +    V +  T  P+L  D WEHA+YL YKN K D++  +W V++W+
Sbjct:    1 MSVYTLPELPYDYSALAPVISPEIIELHHDKHHAAYVKGANDTLEQLAEARDKETWGSINGLEKNLAFHLSGHILHSIYWHNM--TGDGGGEPLDKDGVGELADAIAESFGSFAGFRAQLTKAAATTQGSGWGVLAYEPLSGRLIVEQIYDHQGNVGQGST--PILVFDAWEHAFYLQYKNQKVDFIDAMWAVVNWQ 193          
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODM2_PLEBO (Superoxide dismutase [Mn] 2 OS=Plectonema boryanum GN=sodA2 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.392e-35
Identity = 80/195 (41.03%), Postives = 115/195 (58.97%), Query Frame = 2
Query:  149 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL--FQALNKVDTSTVV-----QLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDWK 712
            L  LPY Y ALEP I    MQLHH KHH AYV N N A+E+    Q+++  D  T +      ++  ++ N GGHVNH++FW+ +      G   P  ++  AI+  FGS +A  Q+ +  G    GSGWVWL + ++   L + +T NQD  + +  T  P++G DVWEHAYYL Y+N +P+YL   WNV++W+
Sbjct:    5 LKPLPYAYDALEPYIDATTMQLHHDKHHAAYVNNLNAAIEKYSDLQSMSVEDLVTHLDRVPEDVRTTVRNNAGGHVNHTMFWEIMG---ANGSGAPTGAISEAINNSFGSFDAFKQQFNDAGTKRFGSGWVWL-VRSQQGDLQILSTPNQDSPLIEGHT--PIMGNDVWEHAYYLKYQNRRPEYLNAWWNVLNWE 193          
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODF_METTH (Superoxide dismutase [Fe] OS=Methanobacterium thermoautotrophicum GN=sod PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.124e-35
Identity = 80/191 (41.88%), Postives = 110/191 (57.59%), Query Frame = 2
Query:  149 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIK---FNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDWK 712
            LP+LPY Y ALEP IS E + +HHQKHHQAYV   N  + +L +A    ++ T V ++ A+K   F+ GG+V H  FW N+ P  E GGEP    L   I+  FGS E   ++ S    + +GSGW  L       RL +      +  V   P    LL +DVWEHAYY+ Y+NV+PDY++  WN+++WK
Sbjct:   11 LPELPYPYDALEPHISREQLTIHHQKHHQAYVDGANALLRKLDEAR---ESDTDVDIKAALKELSFHVGGYVLHLFFWGNMGPADECGGEPS-GKLAEYIEKDFGSFERFRKEFSQAAISAEGSGWAVLTYCQRTDRLFIMQVEKHN--VNVIPHFRILLVLDVWEHAYYIDYRNVRPDYVEAFWNIVNWK 195          
The following BLAST results are available for this feature:
BLAST of EY720328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 224
Match NameE-valueIdentityDescription
SODM_HAEDU2.826e-3643.41Superoxide dismutase [Mn] OS=Haemophilus ducreyi G... [more]
SODM_STRAG4.820e-3640.59Superoxide dismutase [Mn/Fe] OS=Streptococcus agal... [more]
SODM_STRA54.820e-3640.59Superoxide dismutase [Mn/Fe] OS=Streptococcus agal... [more]
SODM_STRA34.820e-3640.59Superoxide dismutase [Mn/Fe] OS=Streptococcus agal... [more]
SODM_STRPY6.295e-3639.11Superoxide dismutase [Mn] OS=Streptococcus pyogene... [more]
SODM_STRMU8.221e-3641.09Superoxide dismutase [Mn/Fe] OS=Streptococcus muta... [more]
SODF_AERPE1.402e-3542.78Superoxide dismutase [Mn/Fe] OS=Aeropyrum pernix G... [more]
SODF_STRCO1.832e-3541.12Superoxide dismutase [Fe-Zn] 1 OS=Streptomyces coe... [more]
SODM2_PLEBO2.392e-3541.03Superoxide dismutase [Mn] 2 OS=Plectonema boryanum... [more]
SODF_METTH3.124e-3541.88Superoxide dismutase [Fe] OS=Methanobacterium ther... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-004-H10-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720328 ID=EY720328; Name=EY720328; organism=Citrus sinensis; type=EST; length=865bp
CCACGCGTCCGCGTCTCGGTTGAATTTCGAACGATCAAGAAACGTCACCG
TTTCATTCGCGATGGCTCTCCGTTCGCTTGCCATCAGAAAAGCTATAGGC
TTGGGTAAATCCGTAGGATTAGGGCTGCGTGGACTGCAGACGGTCACGCT
GCCTGATCTTCCGTACGATTACAGCGCTTTGGAGCCGGCGATTAGCGGAG
AGATTATGCAGCTTCATCACCAGAAGCATCACCAGGCTTACGTTACTAAC
TACAACAAGGCGGTCGAGCAGCTTTTTCAAGCTTTGAACAAAGTCGATAC
GTCCACCGTCGTCCAGTTGCAGGGCGCTATCAAGTTCAACGGCGGAGGTC
ATGTCAACCACTCAATTTTCTGGAAGAATCTTGCTCCTGTTCACGAAGGA
GGTGGCGAGCCACCACATAGTTCCCTTGGTTGGGCTATTGACACGCATTT
TGGTTCTCTGGAAGCATTGATACAAAAGATGAGTGCTGAGGGTGCAGCTT
TGCAGGGCTCTGGATGGGTGTGGCTTGGTTTGGATACAGAGTTTAAAAGG
CTTGTGGTTGAAACTACTGCAAATCAGGATCCGCTGGTGACTAAAGCCCC
AACTCTGGTTCCTTTGCTTGGTATAGATGTTTGGGAGCATGCATACTACC
TACCGTACAAGAATGTCAAACCAGATTATCTGAAAAACATTTGGAACGTA
ATGGACTGGAAGTATGCTAGTGATGTGTATCACAAAGAATGCCCTTGAGC
TTGGAGCTCTTCCTTGACCATGGAGTTCTTCGTTTGATCTGGCGTCTCTC
CTGGGGTGCAAGAGACCAATATACTTGCACCTTTCCCGCTTAAGTGACAA
TTAACCATATTTGGC
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