CX069785

Overview
NameCX069785
Unique NameCX069785
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9604 contig Csv1_Contig9604:481..1222. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069785 vs. ExPASy Swiss-Prot
Match: KAD_SHISS (Adenylate kinase OS=Shigella sonnei (strain Ss046) GN=adk PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.165e-21
Identity = 50/122 (40.98%), Postives = 80/122 (65.57%), Query Frame = -3
Query:  387 EIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRRLDPVTGKIYHVKYSPPET----DEIAARLTKRFDDTEEKVKLRLKTHHHNVEAVLSLY 740
            E+V+ +VKER++Q D + NG+LLDG+PR++ QA A+K+ G   D  +  +VP++ +V+R+VGRR+   +G++YHVK++PP+     D     LT R DD EE V+ RL  +H     ++  Y
Sbjct:   62 ELVIALVKERIAQEDCR-NGFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYY 182          
BLAST of CX069785 vs. ExPASy Swiss-Prot
Match: KAD_ERWCT (Adenylate kinase OS=Erwinia carotovora subsp. atroseptica GN=adk PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.165e-21
Identity = 54/153 (35.29%), Postives = 92/153 (60.13%), Query Frame = -3
Query:  315 EIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRRLDPVTGKIYHVKYSPPET----DEIAARLTKRFDDTEEKVKLRLKTHHHNVEAVLSLYEDVT-------VEVNGSINKEDVFAQIDVAL 740
            E+V+ +VKER++Q D + NG+LLDG+PR++ QA A+K  G   D  I   VP++ +++R++GRR+   +G++YHVK++PP+     D     L+ R DD E+ V+ RL  +H     ++S Y+           +V G+   E+V A+++  L
Sbjct:   62 ELVIALVKERIAQDDCR-NGFLLDGFPRTIPQADAMKDAGIDVDYVIEFAVPDELIIDRIIGRRVHAASGRVYHVKFNPPKVEDKDDVTGEDLSVRKDDQEDTVRKRLVEYHQQTAPLVSYYQKEADAGNTRYFKVEGTRKVEEVRAELETIL 213          
BLAST of CX069785 vs. ExPASy Swiss-Prot
Match: KAD_ECO8A (Adenylate kinase OS=Escherichia coli O8 (strain IAI1) GN=adk PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.165e-21
Identity = 53/137 (38.69%), Postives = 82/137 (59.85%), Query Frame = -3
Query:  342 EIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRRLDPVTGKIYHVKYSPPET----DEIAARLTKRFDDTEEKVKLRLKTHHHNVEAVLSLYEDVTVEVNGSINKED 740
            E+V+ +VKER++Q D   NG+LLDG+PR++ QA A+K+ G   D  +  +VP++ +V+R+VGRR+   +G++YHVK++PP+     D     LT R DD EE V+ RL  +H     ++  Y       N    K D
Sbjct:   62 ELVIALVKERIAQEDCH-NGFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVD 197          
BLAST of CX069785 vs. ExPASy Swiss-Prot
Match: KAD_YERPY (Adenylate kinase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.522e-21
Identity = 55/153 (35.95%), Postives = 93/153 (60.78%), Query Frame = -3
Query:  315 EIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRRLDPVTGKIYHVKYSPPET----DEIAARLTKRFDDTEEKVKLRLKTHHHNVEAVLSLYEDVT-------VEVNGSINKEDVFAQIDVAL 740
            E+V+ +VKER++Q D ++ G+LLDG+PR++ QA A+K+ G + D  +  +VP++ +VER+VGRR+   +G++YHVK++PP+     D     LT R DD E  V+ RL  +H     ++S Y            +++G+ N  +V A++   L
Sbjct:   62 ELVIALVKERITQEDCRD-GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIVERIVGRRVHAASGRVYHVKFNPPKVEDKDDVTGEELTIRKDDQEATVRKRLIEYHQQTAPLVSYYHKEADAGNTQYFKLDGTRNVAEVSAELATIL 213          
BLAST of CX069785 vs. ExPASy Swiss-Prot
Match: KAD_YERPS (Adenylate kinase OS=Yersinia pseudotuberculosis GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.522e-21
Identity = 55/153 (35.95%), Postives = 93/153 (60.78%), Query Frame = -3
Query:  315 EIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRRLDPVTGKIYHVKYSPPET----DEIAARLTKRFDDTEEKVKLRLKTHHHNVEAVLSLYEDVT-------VEVNGSINKEDVFAQIDVAL 740
            E+V+ +VKER++Q D ++ G+LLDG+PR++ QA A+K+ G + D  +  +VP++ +VER+VGRR+   +G++YHVK++PP+     D     LT R DD E  V+ RL  +H     ++S Y            +++G+ N  +V A++   L
Sbjct:   62 ELVIALVKERITQEDCRD-GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIVERIVGRRVHAASGRVYHVKFNPPKVEDKDDVTGEELTIRKDDQEATVRKRLIEYHQQTAPLVSYYHKEADAGNTQYFKLDGTRNVAEVSAELATIL 213          
BLAST of CX069785 vs. ExPASy Swiss-Prot
Match: KAD_YERPP (Adenylate kinase OS=Yersinia pestis (strain Pestoides F) GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.522e-21
Identity = 55/153 (35.95%), Postives = 93/153 (60.78%), Query Frame = -3
Query:  315 EIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRRLDPVTGKIYHVKYSPPET----DEIAARLTKRFDDTEEKVKLRLKTHHHNVEAVLSLYEDVT-------VEVNGSINKEDVFAQIDVAL 740
            E+V+ +VKER++Q D ++ G+LLDG+PR++ QA A+K+ G + D  +  +VP++ +VER+VGRR+   +G++YHVK++PP+     D     LT R DD E  V+ RL  +H     ++S Y            +++G+ N  +V A++   L
Sbjct:   62 ELVIALVKERITQEDCRD-GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIVERIVGRRVHAASGRVYHVKFNPPKVEDKDDVTGEELTIRKDDQEATVRKRLIEYHQQTAPLVSYYHKEADAGNTQYFKLDGTRNVAEVSAELATIL 213          
BLAST of CX069785 vs. ExPASy Swiss-Prot
Match: KAD_YERPN (Adenylate kinase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.522e-21
Identity = 55/153 (35.95%), Postives = 93/153 (60.78%), Query Frame = -3
Query:  315 EIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRRLDPVTGKIYHVKYSPPET----DEIAARLTKRFDDTEEKVKLRLKTHHHNVEAVLSLYEDVT-------VEVNGSINKEDVFAQIDVAL 740
            E+V+ +VKER++Q D ++ G+LLDG+PR++ QA A+K+ G + D  +  +VP++ +VER+VGRR+   +G++YHVK++PP+     D     LT R DD E  V+ RL  +H     ++S Y            +++G+ N  +V A++   L
Sbjct:   62 ELVIALVKERITQEDCRD-GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIVERIVGRRVHAASGRVYHVKFNPPKVEDKDDVTGEELTIRKDDQEATVRKRLIEYHQQTAPLVSYYHKEADAGNTQYFKLDGTRNVAEVSAELATIL 213          
BLAST of CX069785 vs. ExPASy Swiss-Prot
Match: KAD_YERPG (Adenylate kinase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.522e-21
Identity = 55/153 (35.95%), Postives = 93/153 (60.78%), Query Frame = -3
Query:  315 EIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRRLDPVTGKIYHVKYSPPET----DEIAARLTKRFDDTEEKVKLRLKTHHHNVEAVLSLYEDVT-------VEVNGSINKEDVFAQIDVAL 740
            E+V+ +VKER++Q D ++ G+LLDG+PR++ QA A+K+ G + D  +  +VP++ +VER+VGRR+   +G++YHVK++PP+     D     LT R DD E  V+ RL  +H     ++S Y            +++G+ N  +V A++   L
Sbjct:   62 ELVIALVKERITQEDCRD-GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIVERIVGRRVHAASGRVYHVKFNPPKVEDKDDVTGEELTIRKDDQEATVRKRLIEYHQQTAPLVSYYHKEADAGNTQYFKLDGTRNVAEVSAELATIL 213          
BLAST of CX069785 vs. ExPASy Swiss-Prot
Match: KAD_YERPE (Adenylate kinase OS=Yersinia pestis GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.522e-21
Identity = 55/153 (35.95%), Postives = 93/153 (60.78%), Query Frame = -3
Query:  315 EIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRRLDPVTGKIYHVKYSPPET----DEIAARLTKRFDDTEEKVKLRLKTHHHNVEAVLSLYEDVT-------VEVNGSINKEDVFAQIDVAL 740
            E+V+ +VKER++Q D ++ G+LLDG+PR++ QA A+K+ G + D  +  +VP++ +VER+VGRR+   +G++YHVK++PP+     D     LT R DD E  V+ RL  +H     ++S Y            +++G+ N  +V A++   L
Sbjct:   62 ELVIALVKERITQEDCRD-GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIVERIVGRRVHAASGRVYHVKFNPPKVEDKDDVTGEELTIRKDDQEATVRKRLIEYHQQTAPLVSYYHKEADAGNTQYFKLDGTRNVAEVSAELATIL 213          
BLAST of CX069785 vs. ExPASy Swiss-Prot
Match: KAD_YERPB (Adenylate kinase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.522e-21
Identity = 55/153 (35.95%), Postives = 93/153 (60.78%), Query Frame = -3
Query:  315 EIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRRLDPVTGKIYHVKYSPPET----DEIAARLTKRFDDTEEKVKLRLKTHHHNVEAVLSLYEDVT-------VEVNGSINKEDVFAQIDVAL 740
            E+V+ +VKER++Q D ++ G+LLDG+PR++ QA A+K+ G + D  +  +VP++ +VER+VGRR+   +G++YHVK++PP+     D     LT R DD E  V+ RL  +H     ++S Y            +++G+ N  +V A++   L
Sbjct:   62 ELVIALVKERITQEDCRD-GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIVERIVGRRVHAASGRVYHVKFNPPKVEDKDDVTGEELTIRKDDQEATVRKRLIEYHQQTAPLVSYYHKEADAGNTQYFKLDGTRNVAEVSAELATIL 213          
The following BLAST results are available for this feature:
BLAST of CX069785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_SHISS1.165e-2140.98Adenylate kinase OS=Shigella sonnei (strain Ss046)... [more]
KAD_ERWCT1.165e-2135.29Adenylate kinase OS=Erwinia carotovora subsp. atro... [more]
KAD_ECO8A1.165e-2138.69Adenylate kinase OS=Escherichia coli O8 (strain IA... [more]
KAD_YERPY1.522e-2135.95Adenylate kinase OS=Yersinia pseudotuberculosis se... [more]
KAD_YERPS1.522e-2135.95Adenylate kinase OS=Yersinia pseudotuberculosis GN... [more]
KAD_YERPP1.522e-2135.95Adenylate kinase OS=Yersinia pestis (strain Pestoi... [more]
KAD_YERPN1.522e-2135.95Adenylate kinase OS=Yersinia pestis bv. Antiqua (s... [more]
KAD_YERPG1.522e-2135.95Adenylate kinase OS=Yersinia pestis bv. Antiqua (s... [more]
KAD_YERPE1.522e-2135.95Adenylate kinase OS=Yersinia pestis GN=adk PE=3 SV... [more]
KAD_YERPB1.522e-2135.95Adenylate kinase OS=Yersinia pseudotuberculosis se... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12G06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12G06-N12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069785 ID=CX069785; Name=CX069785; organism=Citrus sinensis; type=EST; length=742bp
TTTTTTTTTTTTTAATCAAATTCAAATCAATTGTATACTTCCACTATGAA
TAATTAAGAGAATTTACACTCAACAAATAGTTTTGAATCATCATTTGACA
TGGTTTGTATCGGTGGGTAATTAAAATTTTCATTTTTCTTAAATTGATCT
ACTTGTTGCTCAGCCTGGACTAAACCCGAGTATAAGAGAACAGTATGCGA
TTATTCAGAGTTGCAAGTAATTGCAAAAGAAACCTTTTTCTTTTACCTAT
TCATATTCGACTTCTATGCCGCCAAAGATCCCAATGCACTCTTCCTTTGC
TCCAGTAAATTTGTCAAAGCAACATCAATTTGAGCGAAAACATCCTCCTT
GTTAATACTTCCATTAACCTCGACTGTCACGTCTTCATACAATGAAAGTA
CTGCCTCCACATTATGATGATGAGTCTTCAAACGCAACTTCACCTTCTCT
TCTGTATCATCAAAACGTTTGGTCAGCCTAGCAGCTATTTCATCAGTTTC
TGGTGGAGAGTACTTCACGTGGTATATTTTCCCAGTTACAGGATCCAACC
TACGACCCACTACTCTCTCAACAAGAGTATCTTCTGGGACTTCTAATAGA
ATGAAAAGATCAGGCTGGAAACCATATTTTTTCAGAGCAGTTGCCTGAGA
TAAGCTTCTAGGATATCCATCCAAAAGCCAGCCATTTTCTTGAGAATCTG
GCTGTGAAAGACGCTCCTTCACCATCGTGACAACAATTTCCT
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