CX069782

Overview
NameCX069782
Unique NameCX069782
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: FTSH7_ORYSJ (Cell division protease ftsH homolog 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.086e-12
Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = -3
Query:  533 VAYHESGHAVAGWFLEHAEP----LLKVTIVPRGTAALGFAQYVPN--ENLLLTKEQLFDMTCMTLGGRAAEQVLL-GKISTGAQNDLEKVTKMTYAQVAVYGLAKRL 835
            VA HE GHAV G  + +  P    + K++I+PR   ALGF    P   +  LL  ++L       LGGRAAE+V+L G++STGA +D+ + T M Y  VA YGL +R+
Sbjct:  608 VARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYTPPTTEDRYLLFVDELRGRLVTLLGGRAAEEVVLSGRVSTGALDDIRRATDMAYKAVAEYGLNQRI 715          
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: FTSH5_ARATH (Cell division protease ftsH homolog 5, chloroplastic OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.086e-12
Identity = 38/107 (35.51%), Postives = 64/107 (59.81%), Query Frame = -3
Query:  533 VAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL----LLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLAKRL 835
            VAYHE+GHA+ G  +   +P+ K++I+PRG A  G   + P+E      L ++  L +   + LGGR AE+V+ G   ++TGA ND  +V+++    V  +G +K++
Sbjct:  509 VAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMVERFGFSKKI 614          
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: FTSH4_ARATH (Cell division protease ftsH homolog 4, mitochondrial OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.725e-12
Identity = 42/119 (35.29%), Postives = 72/119 (60.50%), Query Frame = -3
Query:  485 AYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPN-ENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLAKRLVSCLSHKEKTHSK*VS 832
            A+HE GHA+     E A P+ K TIVPRG  ALG    +P+ +   ++++Q+     + +GGR AE+++ G  ++++GA +DLE+ TK+  A V  +G++K  V  ++H    + K +S
Sbjct:  484 AFHEGGHALVAIHTEGALPVHKATIVPRG-MALGMVSQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGESEVTSGASSDLEQATKLARAMVTKFGMSKE-VGLVAHNYDDNGKSMS 600          
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: FTSH1_ARATH (Cell division protease ftsH homolog 1, chloroplastic OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.725e-12
Identity = 37/107 (34.58%), Postives = 64/107 (59.81%), Query Frame = -3
Query:  533 VAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL----LLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLAKRL 835
            VAYHE+GHA+ G  +   +P+ K++I+PRG A  G   + P+E      L ++  L +   + LGGR AE+V+ G   ++TGA ND  +V+++    +  +G +K++
Sbjct:  521 VAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMIERFGFSKKI 626          
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: FTSH5_ORYSJ (Cell division protease ftsH homolog 5, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH5 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.558e-12
Identity = 37/102 (36.27%), Postives = 61/102 (59.80%), Query Frame = -3
Query:  533 AYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLAKRL 832
            AYHE GHA+     E A P+ K TIVPRG A    AQ    +   ++++Q+     + +GGR AE+++ G  ++++GA +D ++ T +  A V  YG++K+L
Sbjct:  487 AYHEGGHALVAIHTEGAHPVHKATIVPRGMALGMVAQLPDKDETSVSRKQMLARLDVCMGGRVAEELIFGDSEVTSGASSDFQQATAVARAMVTKYGMSKQL 588          
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPU (Cell division protease ftsH homolog OS=Mycoplasma pulmonis GN=ftsH PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.647e-12
Identity = 40/101 (39.60%), Postives = 60/101 (59.41%), Query Frame = -3
Query:  542 VAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLL-LTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQVAVYGLA 835
            VAYHE+GHAV G  ++    + K+TI+PRG A  G+    P E     +K++L       +GGRAAE ++ GK  ISTGA +D+ + TK+    V  +G++
Sbjct:  471 VAYHEAGHAVVGLKVKGGNKVQKITIIPRGNAG-GYNLMTPEEEKYNASKKELLATIASYMGGRAAEMIIYGKENISTGASDDISRATKIARKMVTEWGMS 570          
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ftsH PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.070e-12
Identity = 41/114 (35.96%), Postives = 64/114 (56.14%), Query Frame = -3
Query:  506 TVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTL-GGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLAKRLVSCLSHKEK 838
            + AYHE+GH + G  +   +P  KVTI+PRG  ALG   ++P  ++L    Q  +    TL GGR AE+++ G   +STGA ND++  T +    V  +G + +L   L  +E+
Sbjct:  410 STAYHEAGHVIIGRLVPDHDPAHKVTIIPRG-QALGITFFLPESDILSISRQKLESQISTLYGGRLAEEIIYGSQNVSTGAFNDIKVATNLARNMVTQWGFSDKLGPLLYAEEE 522          
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: FTSH9_ARATH (Cell division protease ftsH homolog 9, chloroplastic OS=Arabidopsis thaliana GN=FTSH9 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.070e-12
Identity = 46/109 (42.20%), Postives = 64/109 (58.72%), Query Frame = -3
Query:  533 VAYHESGHAVAGW----FLEHAEPLLKVTIVPRGTAALGFAQYVP---NENLLLTKEQLFDMTCMTLGGRAAEQVLL-GKISTGAQNDLEKVTKMTYAQVAVYGLAKRL 835
            VA HE+GHAV G      L     + K++I+PR   ALGF  Y+P    +  LL  ++L       LGGRAAE+V+  G+ISTGA +D+ + T M Y  VA YGL +++
Sbjct:  591 VARHEAGHAVVGTAVASLLSGQSRVEKLSILPRSGGALGFT-YIPPTHEDRYLLFIDELHGRLVTLLGGRAAEEVVYSGRISTGALDDIRRATDMAYKAVAEYGLNEKI 698          
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAI (Cell division protease ftsH OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ftsH PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.927e-12
Identity = 41/114 (35.96%), Postives = 64/114 (56.14%), Query Frame = -3
Query:  506 TVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTL-GGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLAKRLVSCLSHKEK 838
            + AYHE+GH + G  +   +P  KVTI+PRG  ALG   ++P  + L    Q  +    TL GGR AE+++ G   +STGA ND++  T +    V  +G +++L   L  +E+
Sbjct:  410 STAYHEAGHVIIGRLVPDHDPAHKVTIIPRG-RALGVTFFLPESDTLSISRQKLESQISTLYGGRLAEEIIYGAKNVSTGAYNDIKIATSLAKNMVTQWGFSEKLGPLLYAEEE 522          
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: FTSH4_ORYSJ (Cell division protease ftsH homolog 4, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH4 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.927e-12
Identity = 36/102 (35.29%), Postives = 59/102 (57.84%), Query Frame = -3
Query:  533 AYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLAKRL 832
            AYHE GHA+     E A P+ K TIVPRG      +Q    +    +++Q+     +++ GR AE+++ G  ++++GA +D +  TKM  A V  YG++K+L
Sbjct:  480 AYHEGGHALVAIHTEGARPVHKATIVPRGRTLGMVSQLPEKDETSFSRKQMLAWLDVSMAGRVAEELIFGDSEVTSGASSDFQNATKMARAMVTKYGMSKQL 581          
The following BLAST results are available for this feature:
BLAST of CX069782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
FTSH7_ORYSJ2.086e-1242.59Cell division protease ftsH homolog 7, chloroplast... [more]
FTSH5_ARATH2.086e-1235.51Cell division protease ftsH homolog 5, chloroplast... [more]
FTSH4_ARATH2.725e-1235.29Cell division protease ftsH homolog 4, mitochondri... [more]
FTSH1_ARATH2.725e-1234.58Cell division protease ftsH homolog 1, chloroplast... [more]
FTSH5_ORYSJ3.558e-1236.27Cell division protease ftsH homolog 5, mitochondri... [more]
FTSH_MYCPU4.647e-1239.60Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH_BUCAP6.070e-1235.96Cell division protease ftsH OS=Buchnera aphidicola... [more]
FTSH9_ARATH6.070e-1242.20Cell division protease ftsH homolog 9, chloroplast... [more]
FTSH_BUCAI7.927e-1235.96Cell division protease ftsH OS=Buchnera aphidicola... [more]
FTSH4_ORYSJ7.927e-1235.29Cell division protease ftsH homolog 4, mitochondri... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12G04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12G04-N8-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069782 ID=CX069782; Name=CX069782; organism=Citrus sinensis; type=EST; length=840bp
TTTTTTTTTTGTCAGAAAGATCTTAGGGATAAAATTAAATAAAAATTGAA
CACTATGAATATGATTACAAATTACAGAGTACCCTAATTCCAACGGGCGG
GGAAAAAAAAAGAAAAAATCATCTCAAGTATGAATTACAAACATTTAACC
TACATGGTTTCTCATGCCGGAGCAACCTGAGGCTCGAGTGGTGAAGAACC
ATCATCCACGGTTCCAGTCTCTGGGGGCGCTGAGCTCTTCTCTTCCTCTT
CGAAACCTTGCTTGAATCTGTCATAATTTGTGAGCTCACTGGATTTGAAT
GGCCGTTCACCCAGAACTCGAAGCAGATCATCTTGGTGAAGAACTTCCTT
TTCAAGCAATAACTCGGCAATCTGAGCTACATGCTCTTTGTGTTCCTCAA
TAAGTTGGACTGTGCGTACATATGCCTTGCCTACCCATTCTCGAACCTCG
GCATCTATGATTGCCCCAGTCTTGCTACTGTATGGCTTACTCATTTCGAA
TGTGTCTTCTCTTTGTGGGAAAGACAAGAGACCAACCTTTTCGCTAAACC
ATACACGGCAACTTGGGCATAGGTCATCTTTGTTACCTTCTCCAAGTCAT
TTTGAGCTCCAGTAGATATCTTCCCCAACAAAACCTGCTCAGCTGCTCGA
CCGCCAAGGGTCATACACGTCATATCAAAAAGCTGCTCCTTTGTCAGAAG
AAGGTTCTCGTTAGGGACATACTGGGCAAATCCAAGTGCAGCTGTACCTC
GAGGAACAATTGTCACTTTTAACAAGGGTTCTGCATGTTCCAGAAACCAT
CCAGCAACAGCATGGCCGGATTCATGGTAAGCAACTGTCC
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