CX069782

Overview
NameCX069782
Unique NameCX069782
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: FTSH2_HAEIN (Cell division protease ftsH homolog 2 OS=Haemophilus influenzae GN=ftsH-B PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.927e-12
Identity = 38/105 (36.19%), Postives = 64/105 (60.95%), Query Frame = -3
Query:  533 TVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQVAVYGLAKRL 838
            + AYHE+GHA+ G+ +   +P+ KVTI+PRG  ALG   ++P  + + ++++QL         GR AE ++ G+  ISTGA ND++  T +    V  +G +++L
Sbjct:  155 STAYHEAGHAIVGYLVPEHDPVHKVTIIPRG-RALGVTFFLPEGDQISISQKQLESKLSTLYAGRLAEDLIYGEENISTGASNDIKVATNIARNMVTQWGFSEKL 258          
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: FTSH1_HAEIN (Cell division protease ftsH homolog 1 OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.927e-12
Identity = 38/105 (36.19%), Postives = 64/105 (60.95%), Query Frame = -3
Query:  533 TVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQVAVYGLAKRL 838
            + AYHE+GHA+ G+ +   +P+ KVTI+PRG  ALG   ++P  + + ++++QL         GR AE ++ G+  ISTGA ND++  T +    V  +G +++L
Sbjct:  409 STAYHEAGHAIVGYLVPEHDPVHKVTIIPRG-RALGVTFFLPEGDQISISQKQLESKLSTLYAGRLAEDLIYGEENISTGASNDIKVATNIARNMVTQWGFSEKL 512          
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: YMEL1_RAT (ATP-dependent metalloprotease YME1L1 OS=Rattus norvegicus GN=Yme1l1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.035e-11
Identity = 38/103 (36.89%), Postives = 62/103 (60.19%), Query Frame = -3
Query:  533 AYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLAKRL 832
            AYHESGHA+  ++ + A P+ K TI+PRG   LG    +P N+     + QL     +++GGR AE+++ G   I+TGA +D +  TK+    V  +G++++L
Sbjct:  539 AYHESGHAIIAYYTKDAMPINKATIMPRG-PTLGHVSLLPENDRWNEIRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKL 640          
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: FTSH7_ARATH (Cell division protease ftsH homolog 7, chloroplastic OS=Arabidopsis thaliana GN=FTSH7 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.352e-11
Identity = 46/109 (42.20%), Postives = 67/109 (61.47%), Query Frame = -3
Query:  533 VAYHESGHAVAGWFLEH---AEPLL-KVTIVPRGTAALGFAQYVP---NENLLLTKEQLFDMTCMTLGGRAAEQVLL-GKISTGAQNDLEKVTKMTYAQVAVYGLAKRL 835
            VA HE+GHAV G  + +    +P + K++I+PR   ALGF  Y+P    +  LL  ++L       LGGRAAE+V+  G+ISTGA +D+ + T M Y  VA YGL +++
Sbjct:  587 VARHEAGHAVVGTAVANLLTGQPRVEKLSILPRTGGALGFT-YIPPTSEDRYLLFIDELLGRLVTLLGGRAAEEVVYSGRISTGAFDDIRRATDMAYKAVAEYGLNQKI 694          
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: FTSH_RICBR (Cell division protease ftsH homolog OS=Rickettsia bellii (strain RML369-C) GN=ftsH PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.766e-11
Identity = 35/103 (33.98%), Postives = 64/103 (62.14%), Query Frame = -3
Query:  533 AYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLAKRL 832
            AYHE GHA+ G +   ++P+ K TI+PRG  ALG    +P N+   + ++++     + + GR AE+++ G  K+++GA +D++  T+M  A V  +GL+ ++
Sbjct:  415 AYHEGGHALVGLYCLASDPIHKATIIPRG-RALGMVMRLPENDRFSMPRDKMEADIAVAMAGRVAEEIIFGKEKVTSGASSDIKMATRMAKAMVTDWGLSDKV 516          
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: FTSH_RICFE (Cell division protease ftsH homolog OS=Rickettsia felis GN=ftsH PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.012e-11
Identity = 38/100 (38.00%), Postives = 58/100 (58.00%), Query Frame = -3
Query:  542 AYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLA 832
            AYHE GHA+ G +   A PL K TI+PRG  ALG  Q +P  +     +EQ+     + + GR AE+++ G  K+++GA +D++  T +  A V   GL+
Sbjct:  415 AYHEGGHALVGLYCPAASPLHKATIIPRGN-ALGMVQRLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGLS 513          
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: FTSH_RICPR (Cell division protease ftsH homolog OS=Rickettsia prowazekii GN=ftsH PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.138e-11
Identity = 37/100 (37.00%), Postives = 58/100 (58.00%), Query Frame = -3
Query:  542 AYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLA 832
            AYHE GHA+ G +   A P+ K TI+PRG  ALG  Q +P  +     +EQ+     + + GR AE+++ G  K+++GA +D++  T +  A V   GL+
Sbjct:  415 AYHEGGHALVGLYCPAASPIHKATIIPRGN-ALGMVQRLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGLS 513          
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: FTSH_RICTY (Cell division protease ftsH homolog OS=Rickettsia typhi GN=ftsH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.711e-11
Identity = 37/100 (37.00%), Postives = 58/100 (58.00%), Query Frame = -3
Query:  542 AYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLA 832
            AYHE GHA+ G +   A P+ K TI+PRG  ALG  Q +P  +     +EQ+     + + GR AE+++ G  K+++GA +D++  T +  A V   GL+
Sbjct:  415 AYHEGGHALVGLYCPAASPIHKATIIPRGN-ALGMVQRLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGKNKVTSGAASDIKGATNIARAMVTKAGLS 513          
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPN (Cell division protease ftsH homolog OS=Mycoplasma pneumoniae GN=ftsH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.711e-11
Identity = 40/103 (38.83%), Postives = 57/103 (55.34%), Query Frame = -3
Query:  539 VAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN--LLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLAK 835
            VAYHE+GHA+ G  +   + + K+TI+PRG A  G+    P      L  K  L  M    +GGRAAE+ + G  +I+TGA +D  K T +  A V   G++K
Sbjct:  487 VAYHEAGHALVGLHVHSNDEVQKITIIPRGQAG-GYTLSTPKSGDLNLKRKSDLLAMIATAMGGRAAEEEIYGPLEITTGASSDFYKATNIARAMVTQLGMSK 588          
BLAST of CX069782 vs. ExPASy Swiss-Prot
Match: FTSH_MYCGE (Cell division protease ftsH homolog OS=Mycoplasma genitalium GN=ftsH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.711e-11
Identity = 40/103 (38.83%), Postives = 57/103 (55.34%), Query Frame = -3
Query:  539 VAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN--LLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLAK 835
            VAYHE+GHA+ G  +   + + K+TI+PRG A  G+    P      L  K  L  M    +GGRAAE+ + G  +I+TGA +D  K T +  A V   G++K
Sbjct:  490 VAYHEAGHALVGLHVHSNDEVQKITIIPRGQAG-GYTLSTPKSGDLNLKRKSDLLAMIATAMGGRAAEEEIYGNLEITTGASSDFYKATNIARAMVTQLGMSK 591          
The following BLAST results are available for this feature:
BLAST of CX069782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
FTSH2_HAEIN7.927e-1236.19Cell division protease ftsH homolog 2 OS=Haemophil... [more]
FTSH1_HAEIN7.927e-1236.19Cell division protease ftsH homolog 1 OS=Haemophil... [more]
YMEL1_RAT1.035e-1136.89ATP-dependent metalloprotease YME1L1 OS=Rattus nor... [more]
FTSH7_ARATH1.352e-1142.20Cell division protease ftsH homolog 7, chloroplast... [more]
FTSH_RICBR1.766e-1133.98Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_RICFE3.012e-1138.00Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_RICPR5.138e-1137.00Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_RICTY6.711e-1137.00Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_MYCPN6.711e-1138.83Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH_MYCGE6.711e-1138.83Cell division protease ftsH homolog OS=Mycoplasma ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12G04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12G04-N8-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069782 ID=CX069782; Name=CX069782; organism=Citrus sinensis; type=EST; length=840bp
TTTTTTTTTTGTCAGAAAGATCTTAGGGATAAAATTAAATAAAAATTGAA
CACTATGAATATGATTACAAATTACAGAGTACCCTAATTCCAACGGGCGG
GGAAAAAAAAAGAAAAAATCATCTCAAGTATGAATTACAAACATTTAACC
TACATGGTTTCTCATGCCGGAGCAACCTGAGGCTCGAGTGGTGAAGAACC
ATCATCCACGGTTCCAGTCTCTGGGGGCGCTGAGCTCTTCTCTTCCTCTT
CGAAACCTTGCTTGAATCTGTCATAATTTGTGAGCTCACTGGATTTGAAT
GGCCGTTCACCCAGAACTCGAAGCAGATCATCTTGGTGAAGAACTTCCTT
TTCAAGCAATAACTCGGCAATCTGAGCTACATGCTCTTTGTGTTCCTCAA
TAAGTTGGACTGTGCGTACATATGCCTTGCCTACCCATTCTCGAACCTCG
GCATCTATGATTGCCCCAGTCTTGCTACTGTATGGCTTACTCATTTCGAA
TGTGTCTTCTCTTTGTGGGAAAGACAAGAGACCAACCTTTTCGCTAAACC
ATACACGGCAACTTGGGCATAGGTCATCTTTGTTACCTTCTCCAAGTCAT
TTTGAGCTCCAGTAGATATCTTCCCCAACAAAACCTGCTCAGCTGCTCGA
CCGCCAAGGGTCATACACGTCATATCAAAAAGCTGCTCCTTTGTCAGAAG
AAGGTTCTCGTTAGGGACATACTGGGCAAATCCAAGTGCAGCTGTACCTC
GAGGAACAATTGTCACTTTTAACAAGGGTTCTGCATGTTCCAGAAACCAT
CCAGCAACAGCATGGCCGGATTCATGGTAAGCAACTGTCC
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