CX069781

Overview
NameCX069781
Unique NameCX069781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FTSH_STRR6 (Cell division protease ftsH homolog OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.183e-24
Identity = 50/115 (43.48%), Postives = 75/115 (65.22%), Query Frame = 3 
Query:    6 KKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGLAKRL 347
            KK+K +S+ ER  VAYHE+GH + G  L +A  + KVTIVPRG A  G+   +P E+ +LL+KE + +     +GGR AE+++    +TGA ND E+ T+M  A V  YG++++L
Sbjct:  433 KKDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPRGRAG-GYMIALPKEDQMLLSKEDMKEQLAGLMGGRVAEEIIFNVQTTGASNDFEQATQMARAMVTEYGMSEKL 546

HSP 2 Score: 35.8094 bits (81), Expect = 2.183e-24
Identity = 30/110 (27.27%), Postives = 49/110 (44.55%), Query Frame = 2 
Query:  335 SEKVGLLSFPQREDTFEMSKPYSS---KTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDL--LRVLGERP---FKSSELTNYDRFKQGFEEEE 640
            SEK+G + +           P  S   +T   ID EVR  + +A  +  ++I+ ++E    IAE LL+ E L    +  L   G+ P    + S   +YD  K    +E+
Sbjct:  543 SEKLGPVQYEGNHAMLGAQSPQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKALYETGKMPEAVEEESHALSYDEVKSKMNDEK 652
[Close]
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FTSH_STRPN (Cell division protease ftsH homolog OS=Streptococcus pneumoniae GN=ftsH PE=3 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 2.183e-24
Identity = 50/115 (43.48%), Postives = 75/115 (65.22%), Query Frame = 3 
Query:    6 KKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGLAKRL 347
            KK+K +S+ ER  VAYHE+GH + G  L +A  + KVTIVPRG A  G+   +P E+ +LL+KE + +     +GGR AE+++    +TGA ND E+ T+M  A V  YG++++L
Sbjct:  433 KKDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPRGRAG-GYMIALPKEDQMLLSKEDMKEQLAGLMGGRVAEEIIFNVQTTGASNDFEQATQMARAMVTEYGMSEKL 546

HSP 2 Score: 35.8094 bits (81), Expect = 2.183e-24
Identity = 30/110 (27.27%), Postives = 49/110 (44.55%), Query Frame = 2 
Query:  335 SEKVGLLSFPQREDTFEMSKPYSS---KTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDL--LRVLGERP---FKSSELTNYDRFKQGFEEEE 640
            SEK+G + +           P  S   +T   ID EVR  + +A  +  ++I+ ++E    IAE LL+ E L    +  L   G+ P    + S   +YD  K    +E+
Sbjct:  543 SEKLGPVQYEGNHAMLGAQSPQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKALYETGKMPEAVEEESHALSYDEVKSKMNDEK 652
[Close]
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FTSH_MYCLE (Cell division protease ftsH homolog OS=Mycobacterium leprae GN=ftsH PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.375e-23
Identity = 44/115 (38.26%), Postives = 72/115 (62.61%), Query Frame = 3 
Query:    6 KKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGLAKRL 347
            +K ++IS+ E++  AYHE GH +A W +   EP+ KVTI+ RG    G A  VP E+  L T+ ++       +GGRAAE+++  + +TGA +D+EK TK+  + V  +G++ +L
Sbjct:  409 RKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTG-GHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREPTTGAVSDIEKATKIARSMVTEFGMSSKL 522

HSP 2 Score: 41.2022 bits (95), Expect = 1.375e-23
Identity = 28/106 (26.42%), Postives = 49/106 (46.23%), Query Frame = 2 
Query:  398 YSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPETGTVDDGSSPLEPQVAPA 715
            YS +    ID EVR+ +  A+    +++ E+++ +  +A  LLEKE LH+ +L  +      K   LT +D F      ++     P    ++ G    +P   PA
Sbjct:  546 YSHEVARDIDDEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELEGIFASVE-KRPRLTMFDDFGGRIPSDKPPIKTPGELAIERGEPWPQPVPEPA 650
[Close]
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTU (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis GN=ftsH PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.376e-23
Identity = 43/115 (37.39%), Postives = 72/115 (62.61%), Query Frame = 3 
Query:    6 KKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGLAKRL 347
            +K ++IS+ E++  AYHE GH +A W +   EP+ KVTI+ RG    G A  VP E+  L T+ ++       +GGRAAE+++  + +TGA +D+E+ TK+  + V  +G++ +L
Sbjct:  409 RKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTG-GHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREPTTGAVSDIEQATKIARSMVTEFGMSSKL 522

HSP 2 Score: 42.743 bits (99), Expect = 1.376e-23
Identity = 28/106 (26.42%), Postives = 50/106 (47.17%), Query Frame = 2 
Query:  398 YSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPETGTVDDGSSPLEPQVAPA 715
            YS +    ID EVR+ +  A+    +++ E+++ +  +A  LLEKE LH+ +L  +  +   K   LT +D F      ++     P    ++ G    +P   PA
Sbjct:  546 YSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFADVE-KRPRLTMFDDFGGRIPSDKPPIKTPGELAIERGEPWPQPVPEPA 650
[Close]
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTA (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ftsH PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.376e-23
Identity = 43/115 (37.39%), Postives = 72/115 (62.61%), Query Frame = 3 
Query:    6 KKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGLAKRL 347
            +K ++IS+ E++  AYHE GH +A W +   EP+ KVTI+ RG    G A  VP E+  L T+ ++       +GGRAAE+++  + +TGA +D+E+ TK+  + V  +G++ +L
Sbjct:  409 RKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTG-GHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREPTTGAVSDIEQATKIARSMVTEFGMSSKL 522

HSP 2 Score: 42.743 bits (99), Expect = 1.376e-23
Identity = 28/106 (26.42%), Postives = 50/106 (47.17%), Query Frame = 2 
Query:  398 YSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPETGTVDDGSSPLEPQVAPA 715
            YS +    ID EVR+ +  A+    +++ E+++ +  +A  LLEKE LH+ +L  +  +   K   LT +D F      ++     P    ++ G    +P   PA
Sbjct:  546 YSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFADVE-KRPRLTMFDDFGGRIPSDKPPIKTPGELAIERGEPWPQPVPEPA 650
[Close]
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FTSH_MYCBO (Cell division protease ftsH homolog OS=Mycobacterium bovis GN=ftsH PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.376e-23
Identity = 43/115 (37.39%), Postives = 72/115 (62.61%), Query Frame = 3 
Query:    6 KKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGLAKRL 347
            +K ++IS+ E++  AYHE GH +A W +   EP+ KVTI+ RG    G A  VP E+  L T+ ++       +GGRAAE+++  + +TGA +D+E+ TK+  + V  +G++ +L
Sbjct:  409 RKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTG-GHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREPTTGAVSDIEQATKIARSMVTEFGMSSKL 522

HSP 2 Score: 42.743 bits (99), Expect = 1.376e-23
Identity = 28/106 (26.42%), Postives = 50/106 (47.17%), Query Frame = 2 
Query:  398 YSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPETGTVDDGSSPLEPQVAPA 715
            YS +    ID EVR+ +  A+    +++ E+++ +  +A  LLEKE LH+ +L  +  +   K   LT +D F      ++     P    ++ G    +P   PA
Sbjct:  546 YSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFADVE-KRPRLTMFDDFGGRIPSDKPPIKTPGELAIERGEPWPQPVPEPA 650
[Close]
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FTSH_GUITH (Cell division protease ftsH homolog OS=Guillardia theta GN=ftsH PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.795e-23
Identity = 45/110 (40.91%), Postives = 71/110 (64.55%), Query Frame = 3 
Query:   18 VISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLA 338
            ++    +R +AYHE GHA+ G  L+H +P+ KVT+VPRG A  G   + P+E+  L+++ Q+       LGGRAAE+V+ G  +++TGA NDL++VT M    V  +G++
Sbjct:  422 LVDSKTKRLIAYHEVGHAIIGTLLKHHDPVQKVTLVPRGQAK-GLTWFTPSEDQSLISRSQILARIMGALGGRAAEEVVFGLPEVTTGAGNDLQQVTSMARQMVTRFGMS 530

HSP 2 Score: 43.1282 bits (100), Expect = 1.795e-23
Identity = 19/66 (28.79%), Postives = 39/66 (59.09%), Query Frame = 2 
Query:  377 TFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGE 574
            T   S  YS    + ID +VR  +   +  TVQ+I++++  + ++ +LL+EKE +  D+  +++G+
Sbjct:  549 TMGSSSQYSEDIASRIDMQVRAIIQHCHTETVQIIKDNRVVIDKLVDLLIEKETIDGDEFRQIVGD 614
[Close]
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FTSH_PORPU (Cell division protease ftsH homolog OS=Porphyra purpurea GN=ftsH PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.919e-22
Identity = 45/111 (40.54%), Postives = 72/111 (64.86%), Query Frame = 3 
Query:   18 VISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLAK 341
            +I    +R +AYHE GHA+ G  LEH +P+ KVT++PRG A  G   + P+++  L+++ Q+       LGGRAAE+++ G  +++TGA NDL++VT M    V  +G++K
Sbjct:  422 LIDSKSKRLIAYHEVGHAIIGSLLEHHDPVQKVTLIPRGQAR-GLTWFTPSDDQSLISRSQILARIVGALGGRAAEEIIFGDAEVTTGASNDLQQVTSMARQMVTRFGMSK 531

HSP 2 Score: 36.5798 bits (83), Expect = 1.919e-22
Identity = 15/59 (25.42%), Postives = 35/59 (59.32%), Query Frame = 2 
Query:  398 YSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGE 574
            YS +    ID +VRE V + Y    +++++++  + ++ +LL+EKE +  ++   ++ E
Sbjct:  556 YSDEVATNIDKQVREIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIEGNEFRHIVKE 614
[Close]
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FSTH_PORYE (Cell division protease ftsH homolog OS=Porphyra yezoensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.496e-22
Identity = 45/111 (40.54%), Postives = 72/111 (64.86%), Query Frame = 3 
Query:   18 VISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLAK 341
            +I    +R +AYHE GHA+ G  LEH +P+ KVT++PRG A  G   + P+++  L+++ Q+       LGGRAAE+++ G  +++TGA NDL++VT M    V  +G++K
Sbjct:  422 LIDSKSKRLIAYHEVGHAIIGSLLEHHDPVQKVTLIPRGQAR-GLTWFTPSDDQSLISRSQILARIVGALGGRAAEEIIFGDAEVTTGASNDLQQVTSMARQMVTRFGMSK 531

HSP 2 Score: 36.1946 bits (82), Expect = 2.496e-22
Identity = 16/59 (27.12%), Postives = 34/59 (57.63%), Query Frame = 2 
Query:  398 YSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGE 574
            YS +    ID +VRE V + Y +   +I +++  + ++ +LL+EKE +  ++   ++ E
Sbjct:  556 YSDEVATNIDKQVREIVSECYAQAKHIIIDNRVVIDRLVDLLIEKETIEGNEFRDIVKE 614
[Close]
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FTSH_TREPA (Cell division protease ftsH homolog OS=Treponema pallidum GN=ftsH PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.953e-22
Identity = 49/115 (42.61%), Postives = 82/115 (71.30%), Query Frame = 3 
Query:    3 EKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGLAKR 344
            +KK++VI + ERR +AYHE+GHA+AG F + A+ + K+TI+PRGT+ALG+  ++P ++  ++T++QL     + L GRAAE V  G++STGA ND+ + T +    +  YG++++
Sbjct:  385 QKKSRVIREEERRIIAYHETGHALAGTFTKGADKVHKITIIPRGTSALGYTFHIPEDDRHIVTEQQLLAEVDVLLSGRAAEFVAFGEVSTGAGNDISRATDIVRKMITDYGMSEK 499
The following BLAST results are available for this feature:
BLAST of CX069781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
FTSH_STRR62.183e-2443.48Cell division protease ftsH homolog OS=Streptococc... [more]
FTSH_STRPN2.183e-2443.48Cell division protease ftsH homolog OS=Streptococc... [more]
FTSH_MYCLE1.375e-2338.26Cell division protease ftsH homolog OS=Mycobacteri... [more]
FTSH_MYCTU1.376e-2337.39Cell division protease ftsH homolog OS=Mycobacteri... [more]
FTSH_MYCTA1.376e-2337.39Cell division protease ftsH homolog OS=Mycobacteri... [more]
FTSH_MYCBO1.376e-2337.39Cell division protease ftsH homolog OS=Mycobacteri... [more]
FTSH_GUITH1.795e-2340.91Cell division protease ftsH homolog OS=Guillardia ... [more]
FTSH_PORPU1.919e-2240.54Cell division protease ftsH homolog OS=Porphyra pu... [more]
FSTH_PORYE2.496e-2240.54Cell division protease ftsH homolog OS=Porphyra ye... [more]
FTSH_TREPA6.953e-2242.61Cell division protease ftsH homolog OS=Treponema p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12G04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12G04-N8-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069781 ID=CX069781; Name=CX069781; organism=Citrus sinensis; type=EST; length=882bp
CGGAGAAGAAGAATAAGGTTATAAGCAAGTTGGAGCGCCGGACAGTTGCT
TACCATGAATCCGGCCATGCTGTTGCTGGATGGTTTCTGGAACATGCAGA
ACCCTTGTTAAAAGTGACAATTGTTCCTCGAGGTACAGCTGCACTTGGAT
TTGCCCAGTATGTCCCTAACGAGAACCTTCTTCTGACAAAGGAGCAGCTT
TTTGATATGACGTGTATGACCCTTGGCGGTCGAGCAGCTGAGCAGGTTTT
GTTGGGGAAGATATCTACTGGAGCTCAAAATGACTTGGAGAAGGTAACAA
AGATGACCTATGCCCAAGTTGCCGTGTATGGTTTAGCGAAAAGGTTGGTC
TCTTGTCTTTCCCACAAAGAGAAGACACATTCGAAATGAGTAAGCCATAC
AGTAGCAAGACTGGGGCAATCATAGATGCCGAGGTTCGAGAATGGGTAGG
CAAGGCATATGTACGCACAGTCCAACTTATTGAGGAACACAAAGAGCATG
TAGCTCAGATTGCCGAGTTATTGCTTGAAAAGGAAGTTCTTCACCAAGAT
GATCTGCTTCGAGTTCTGGGTGAACGGCCATTCAAATCCAGTGAGCTCAC
AAATTATGACAGATTCAAGCAAGGTTTCGAAGAGGAAGAGAAGAGCTCAG
CGCCCCCAGAGACTGGAACCGTGGATGATGGTTCTTCACCACTCGAGCCT
CAGGTTGCTCCGGCATGAGAAACCATGTAGGTTAAATGTTTGTAATTCAT
ACTTGAGATGATTTTTTCTTTTTTTTTCCCCGCCCGTTGGAATTAGGGTA
CTCTGTAATTTGTAATCATATTCATAGTGTTCAATTTTTATTTAATTTTA
TCCCTAAGATCTTTCTGACAAAAAAAAAACCT
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