CX069781

Overview
NameCX069781
Unique NameCX069781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4309 contig Csv1_Contig4309:1..883. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.210e-21
Identity = 46/118 (38.98%), Postives = 77/118 (65.25%), Query Frame = 3
Query:    3 EKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQVAVYGLAKRL 347
            E+K   IS  E+  +A HE+GHA+ G   +  + + K++I+PRG A LG  Q +P E+  +  K+ L++   + LGGRAAE+V  GK  I+TGA+NDL++ T + Y  V+++G++ ++
Sbjct:  401 ERKGMTISPKEKEKIAIHEAGHALMGLVSDDDDKVHKISIIPRGMA-LGVTQQLPIEDKHIYDKKDLYNKILVLLGGRAAEEVFFGKDGITTGAENDLQRATDLAYRMVSMWGMSDKV 517          

HSP 2 Score: 35.8094 bits (81), Expect = 1.210e-21
Identity = 21/80 (26.25%), Postives = 42/80 (52.50%), Query Frame = 2
Query:  422 IDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE 661
            ID EV+  + + Y +   ++EE+KE +  + + LLEKE +  ++ + V         EL +  + ++ F+++ KS    E
Sbjct:  547 IDEEVKRIITEQYEKAKAIVEEYKEPLKAVVKKLLEKETITCEEFVEVF---KLYGIELKDKCKKEELFDKDRKSEENKE 623          
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FTSH_BACSU (Cell division protease ftsH homolog OS=Bacillus subtilis GN=ftsH PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.507e-21
Identity = 53/115 (46.09%), Postives = 75/115 (65.22%), Query Frame = 3
Query:    6 KKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGLAKRL 347
            KK++VISK ER  VAYHE GH V G  L+ A+ + KVTIVPRG A  G+A  +P E+    TK +L D     LGGR AE+++ G++STGA ND ++ T +    V  +G++++L
Sbjct:  407 KKSRVISKKERNIVAYHEGGHTVIGLVLDEADMVHKVTIVPRGQAG-GYAVMLPREDRYFQTKPELLDKIVGLLGGRVAEEIIFGEVSTGAHNDFQRATNIARRMVTEFGMSEKL 520          
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.864e-21
Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 3
Query:   18 VISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLA 338
            ++    +R +AYHE GHA+ G  L+  +P+ KVT++PRG A  G   + PNE   L TK QL       +GGRAAE+ + G  +++TGA  DL++VT+M    V  +G++
Sbjct:  421 LVDSKSKRLIAYHEVGHAIVGTLLKDHDPVQKVTLIPRGQAQ-GLTWFTPNEEQGLTTKAQLMARIAGAMGGRAAEEEVFGDDEVTTGAGGDLQQVTEMARQMVTRFGMS 529          

HSP 2 Score: 38.891 bits (89), Expect = 5.864e-21
Identity = 16/59 (27.12%), Postives = 36/59 (61.02%), Query Frame = 2
Query:  398 YSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGE 574
            YS +    IDA+VR+   + +    ++++E +E V ++ +LL+EKE +  ++  +++ E
Sbjct:  555 YSEEVATRIDAQVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQIVAE 613          
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FTSH_HELPJ (Cell division protease ftsH homolog OS=Helicobacter pylori J99 GN=ftsH PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.237e-20
Identity = 54/113 (47.79%), Postives = 74/113 (65.49%), Query Frame = 3
Query:    3 EKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGLA 338
            EKK++ IS  E++ VAYHESGHAV     + +  + KV+I+PRG AALG+    P EN  L+ K +L     + LGGRAAE+V L +ISTGA NDLE+ T +    V+ YG++
Sbjct:  417 EKKSRRISPKEKKIVAYHESGHAVISEMTKGSTRVNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVLLGGRAAEEVFLEEISTGASNDLERATDIIKGMVSYYGMS 529          
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FTSH_CYACA (Cell division protease ftsH homolog OS=Cyanidium caldarium GN=ftsH PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.695e-20
Identity = 48/130 (36.92%), Postives = 78/130 (60.00%), Query Frame = 3
Query:   12 NKVISKLE---------RRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLAKRLVSCLSH 365
            +K+I+ LE         +R +AYHE+GHAVA  FL H +P+ KVT++PR   A G   ++PN++  L++K Q+       L GRA E+++ G  +++ GA ND+++VT M    V  +G++K    CL +
Sbjct:  409 DKIIAGLEGSPLADSRIKRLIAYHEAGHAVAATFLPHHDPVQKVTLIPR-RQAKGLTWFLPNDDQFLVSKSQILSKIIAALAGRAMEEIVFGLPEVTIGAANDIKQVTFMARQMVTKFGMSKVGPICLEN 537          

HSP 2 Score: 33.8834 bits (76), Expect = 3.695e-20
Identity = 14/59 (23.73%), Postives = 34/59 (57.63%), Query Frame = 2
Query:  401 SSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGER 577
            S +  A +D EVR  +   Y++   ++ ++++ + ++   L+EKE +   + +R++ ER
Sbjct:  555 SEEMVAKVDLEVRSILKDCYIQARTILSQNRKLIDRVVNELVEKETIEAKEFMRIVEER 613          
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FTSH_HELPY (Cell division protease ftsH homolog OS=Helicobacter pylori GN=ftsH PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.815e-20
Identity = 54/113 (47.79%), Postives = 73/113 (64.60%), Query Frame = 3
Query:    3 EKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGLA 338
            EKK++ IS  E++ VAYHESGHAV     + +  + KV+I+PRG AALG+    P EN  L+ K +L     + LGGRAAE V L +ISTGA NDLE+ T +    V+ YG++
Sbjct:  417 EKKSRRISPKEKKIVAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVLLGGRAAEDVFLEEISTGASNDLERATDIIKGMVSYYGMS 529          
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FTSH_HELFE (Cell division protease ftsH homolog OS=Helicobacter felis GN=ftsH PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.815e-20
Identity = 54/113 (47.79%), Postives = 73/113 (64.60%), Query Frame = 3
Query:    3 EKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGLA 338
            EKK++ IS  E++ VAYHESGHAV     + +  + KV+I+PRG AALG+    P EN  L+ K +L     + LGGRAAE V L +ISTGA NDLE+ T +    V+ YG++
Sbjct:  423 EKKSRRISPKEKKIVAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVLLGGRAAEDVFLQEISTGASNDLERATDIIKGMVSYYGMS 535          
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FTSH_BACPF (Cell division protease ftsH homolog OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.983e-20
Identity = 52/115 (45.22%), Postives = 77/115 (66.96%), Query Frame = 3
Query:    6 KKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGLAKRL 347
            KK++VIS  E++ VA+HE+GH V G  LE+A+ + KVTIVPRG A  G+A  +P E+   +T+ +L D     LGGR AE+V  G++STGA ND ++ T +    V  YG++++L
Sbjct:  412 KKSRVISPKEKKIVAWHEAGHTVVGVKLENADMVHKVTIVPRGMAG-GYAVMLPKEDRYFMTQPELLDKIIGLLGGRVAEEVTFGEVSTGAHNDFQRATGIARKMVTEYGMSEKL 525          
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FTSHB_ARATH (Cell division protease ftsH homolog 11, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=FTSH11 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.313e-19
Identity = 40/117 (34.19%), Postives = 68/117 (58.12%), Query Frame = 3
Query:    3 EKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLAKRL 347
            E+K   +S+  ++  AYHESGHA+     + A P+ K TI+PRG+A     Q   N+   ++K QL     + +GGR AE+++ G   I+TGA +DL + T++    V+  G+++ +
Sbjct:  603 ERKTMFVSEDSKKLTAYHESGHAIVALNTKGAHPIHKATIMPRGSALGMVTQLPSNDETSVSKRQLLARLDVCMGGRVAEELIFGLDHITTGASSDLSQATELAQYMVSSCGMSEAI 719          

HSP 2 Score: 39.2762 bits (90), Expect = 2.313e-19
Identity = 21/56 (37.50%), Postives = 34/56 (60.71%), Query Frame = 2
Query:  401 SSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVL 568
            SS   + IDAEV + + +AY R   L++ H++ +  +A  LLE E L  +D+ R+L
Sbjct:  729 SSDMQSRIDAEVVKLLREAYERVKSLLKRHEKQLHTLANALLEYETLTAEDIKRIL 784          
BLAST of CX069781 vs. ExPASy Swiss-Prot
Match: FTSH8_ARATH (Cell division protease ftsH homolog 8, chloroplastic OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.459e-18
Identity = 40/102 (39.22%), Postives = 67/102 (65.69%), Query Frame = 3
Query:   45 VAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGLAK 341
            VAYHE GHA+ G      + + KVT++PRG A  G   ++P+++  L++K+QLF      LGGRAAE+V+ G  +++TGA +DL+++T +    V  +G+++
Sbjct:  478 VAYHEVGHAICGTLTPGHDAVQKVTLIPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGESEVTTGAVSDLQQITGLAKQMVTTFGMSE 578          

HSP 2 Score: 36.1946 bits (82), Expect = 1.459e-18
Identity = 20/58 (34.48%), Postives = 30/58 (51.72%), Query Frame = 2
Query:  401 SSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGE 574
            S K    ID  V+    KAY   +  I  ++E + +I E+LLEKE +  D+   +L E
Sbjct:  604 SEKLANDIDTAVKTLSDKAYEIALSQIRNNREAMDKIVEILLEKETMSGDEFRAILSE 661          
The following BLAST results are available for this feature:
BLAST of CX069781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
FTSH_AQUAE1.210e-2138.98Cell division protease ftsH homolog OS=Aquifex aeo... [more]
FTSH_BACSU4.507e-2146.09Cell division protease ftsH homolog OS=Bacillus su... [more]
FTSH1_SYNY35.864e-2140.00Cell division protease ftsH homolog 1 OS=Synechocy... [more]
FTSH_HELPJ2.237e-2047.79Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH_CYACA3.695e-2036.92Cell division protease ftsH homolog OS=Cyanidium c... [more]
FTSH_HELPY3.815e-2047.79Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH_HELFE3.815e-2047.79Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH_BACPF4.983e-2045.22Cell division protease ftsH homolog OS=Bacillus ps... [more]
FTSHB_ARATH2.313e-1934.19Cell division protease ftsH homolog 11, chloroplas... [more]
FTSH8_ARATH1.459e-1839.22Cell division protease ftsH homolog 8, chloroplast... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12G04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12G04-N8-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069781 ID=CX069781; Name=CX069781; organism=Citrus sinensis; type=EST; length=882bp
CGGAGAAGAAGAATAAGGTTATAAGCAAGTTGGAGCGCCGGACAGTTGCT
TACCATGAATCCGGCCATGCTGTTGCTGGATGGTTTCTGGAACATGCAGA
ACCCTTGTTAAAAGTGACAATTGTTCCTCGAGGTACAGCTGCACTTGGAT
TTGCCCAGTATGTCCCTAACGAGAACCTTCTTCTGACAAAGGAGCAGCTT
TTTGATATGACGTGTATGACCCTTGGCGGTCGAGCAGCTGAGCAGGTTTT
GTTGGGGAAGATATCTACTGGAGCTCAAAATGACTTGGAGAAGGTAACAA
AGATGACCTATGCCCAAGTTGCCGTGTATGGTTTAGCGAAAAGGTTGGTC
TCTTGTCTTTCCCACAAAGAGAAGACACATTCGAAATGAGTAAGCCATAC
AGTAGCAAGACTGGGGCAATCATAGATGCCGAGGTTCGAGAATGGGTAGG
CAAGGCATATGTACGCACAGTCCAACTTATTGAGGAACACAAAGAGCATG
TAGCTCAGATTGCCGAGTTATTGCTTGAAAAGGAAGTTCTTCACCAAGAT
GATCTGCTTCGAGTTCTGGGTGAACGGCCATTCAAATCCAGTGAGCTCAC
AAATTATGACAGATTCAAGCAAGGTTTCGAAGAGGAAGAGAAGAGCTCAG
CGCCCCCAGAGACTGGAACCGTGGATGATGGTTCTTCACCACTCGAGCCT
CAGGTTGCTCCGGCATGAGAAACCATGTAGGTTAAATGTTTGTAATTCAT
ACTTGAGATGATTTTTTCTTTTTTTTTCCCCGCCCGTTGGAATTAGGGTA
CTCTGTAATTTGTAATCATATTCATAGTGTTCAATTTTTATTTAATTTTA
TCCCTAAGATCTTTCTGACAAAAAAAAAACCT
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