CX069769

Overview
NameCX069769
Unique NameCX069769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069769 vs. ExPASy Swiss-Prot
Match: EFR_ARATH (LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.572e-12
Identity = 36/97 (37.11%), Postives = 53/97 (54.64%), Query Frame = 2
Query:  131 GNIPTSIASLAPQLQYLELGHNVLSGKVPDFLGKFHSLDTLDLSWNQFSGTLPKSFSNLTKIFNLNLAYNSLTDPFPVM--NVKGIESLDLSYNQFH 415
            G +P SIA+L+  L  L LG N++SG +P  +G   SL  L L  N  SG LP SF  L  +  ++L  N+++   P    N+  ++ L L+ N FH
Sbjct:  358 GELPASIANLSTTLTSLFLGQNLISGTIPHDIGNLVSLQELSLETNMLSGELPVSFGKLLNLQVVDLYSNAISGEIPSYFGNMTRLQKLHLNSNSFH 454          

HSP 2 Score: 27.7202 bits (60), Expect = 7.572e-12
Identity = 25/85 (29.41%), Postives = 37/85 (43.53%), Query Frame = 1
Query:  535 YIDLSENEISGGPVELLNRTDYLVEFRASGSKLKFNMDSLRIVKTLKVLDLSRNLVFGKLPKAISG---LDKLNVSFNNLCGEIP 780
            YIDLS N ++G   E + + + LV   AS +KL                        GK+P+AI G   ++ L +  N+  G IP
Sbjct:  493 YIDLSNNFLTGHFPEEVGKLELLVGLGASYNKLS-----------------------GKMPQAIGGCLSMEFLFMQGNSFDGAIP 554          
BLAST of CX069769 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.279e-12
Identity = 47/148 (31.76%), Postives = 72/148 (48.65%), Query Frame = 2
Query:    5 ISQLKNLTYLDLQHNQLSGAIPDIXXXXXXXXXXXXXXXXXXGNIPTSIASLAPQLQYLELGHNVLSGKVPDFLGKFHSLDTLDLSWNQFSGTLPKSFSNLTKIFNLNLAYNSLTDPFPVMNVKGIESLDLSYNQFHLQQIPSWVTSS 448
            + +L +LT LDL  N L G +P                    G    S++ + P L+YL LGHN   G++     K  SL TLD S+N F+ +LP +FS+LT + +L L  N  +    V+    +E+L+++ N F       W+ SS
Sbjct:   92 LDKLTSLTELDLSSNNLGGDLP--YQFPPNLQRLNLANNQFTGAASYSLSQITP-LKYLNLGHNQFKGQIAIDFSKLDSLTTLDFSFNSFTNSLPATFSSLTSLKSLYLQNNQFSGTVDVLAGLPLETLNIANNDF-----TGWIPSS 231          
BLAST of CX069769 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.279e-12
Identity = 41/114 (35.96%), Postives = 54/114 (47.37%), Query Frame = 2
Query:   20 NLTYLDLQHNQLSGAIPDIXXXXXXXXXXXXXXXXXXGNIPTSIASLAPQLQYLELGHNVLSGKVPDFLGKFHSLDTLDLSWNQFSGTLPKSFSNLTKIFNLNLAYNSLTDPFP 361
            +L  LD   NQ+ G IP                    G IP S+      L YL + +N L+G++P   G+ HSLD LDLS N  SG +P  F NL  +  L L  N+L+ P P
Sbjct:  611 SLKILDASVNQIFGPIPTSLGDLASLVALNLSWNQLQGQIPGSLGKKMAALTYLSIANNNLTGQIPQSFGQLHSLDVLDLSSNHLSGGIPHDFVNLKNLTVLLLNNNNLSGPIP 724          
BLAST of CX069769 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 9.804e-12
Identity = 49/164 (29.88%), Postives = 78/164 (47.56%), Query Frame = 2
Query:    8 SQLKNLTYLDLQHNQLSGAIP-DIXXXXXXXXXXXXXXXXXXGNIP--TSIASLAPQLQYLELGHNVLSGKVPDFLGKFHSLDTLDLSWNQFSGTLPKSFSNLTKIFNLNLAYNSLTDPFPVM---NVKGIESLDLSYNQFHLQQIPSWVTSSPIIFSLKLAKS 481
            S+  NL  + L +N  +G +P D+                  G I   T   S    + YL+   N +SG + D L    +L +L+LS+N F G +PKSF  L  + +L+L++N LT   P       + +++L LSYN F    IP  ++S   + SL L+ +
Sbjct:  149 SKYSNLISITLSYNNFTGKLPNDLFLSSKKLQTLDLSYNNITGPISGLTIPLSSCVSMTYLDFSGNSISGYISDSLINCTNLKSLNLSYNNFDGQIPKSFGELKLLQSLDLSHNRLTGWIPPEIGDTCRSLQNLRLSYNNF-TGVIPESLSSCSWLQSLDLSNN 311          

HSP 2 Score: 28.8758 bits (63), Expect = 9.804e-12
Identity = 36/115 (31.30%), Postives = 51/115 (44.35%), Query Frame = 1
Query:  538 IDLSENEISG----------GPVELLNRTDYLV--EFRASGSKLKFNMDSLRIVK-------------------TLKVLDLSRNLVFGKLPKAISGLDKL---NVSFNNLCGEIP 780
            +DLS N ISG          G +++L  ++ L+  +F  S S  K    SLRI                     +L+ L L  NLV G++P AIS   +L   ++S N L G IP
Sbjct:  306 LDLSNNNISGPFPNTILRSFGSLQILLLSNNLISGDFPTSISACK----SLRIADFSSNRFSGVIPPDLCPGAASLEELRLPDNLVTGEIPPAISQCSELRTIDLSLNYLNGTIP 416          

HSP 3 Score: 70.4774 bits (171), Expect = 1.412e-11
Identity = 44/132 (33.33%), Postives = 68/132 (51.52%), Query Frame = 2
Query:    5 ISQLKNLTYLDLQHNQLSGAIPDIXXXXXXXXXXXXXXXXXXGNIPTSIASLAPQLQYLELGHNVLSGKVPDFLGKF-HSLDTLDLSWNQFSGTLPKSFSNLTKIFNLNLAYNSLTDPFPVMNVKGIESLDL 397
            +S   ++TYLD   N +SG I D                   G IP S   L   LQ L+L HN L+G +P  +G    SL  L LS+N F+G +P+S S+ + + +L+L+ N+++ PFP   ++   SL +
Sbjct:  200 LSSCVSMTYLDFSGNSISGYISDSLINCTNLKSLNLSYNNFDGQIPKSFGELK-LLQSLDLSHNRLTGWIPPEIGDTCRSLQNLRLSYNNFTGVIPESLSSCSWLQSLDLSNNNISGPFPNTILRSFGSLQI 330          
BLAST of CX069769 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 1.656e-11
Identity = 47/159 (29.56%), Postives = 75/159 (47.17%), Query Frame = 2
Query:   17 KNLTYLDLQHNQLSGAIPDIXXXXXXXXXXXXXXXXXXGNIPTSIASLAPQLQYLELGHNVLSGKVPDFLGKFHSLDTLDLSWNQFSGTLPKSFSNLTKIFNLNLAYNSLTDPFPVMNVKGIES---LDLSYNQFHLQQIPSWVTSSPIIFSLKLAKSE 484
            K++  L +  N+L+G +PD                   G +  ++++L+  L+ L +  N  S  +PD  G    L+ LD+S N+FSG  P S S  +K+  L+L  NSL+     +N  G      LDL+ N F    +P  +   P +  L LAK+E
Sbjct:  208 KSIQQLHIDSNRLTGQLPDYLYSIRELEQLSLSGNYLSGELSKNLSNLSG-LKSLLISENRFSDVIPDVFGNLTQLEHLDVSSNKFSGRFPPSLSQCSKLRVLDLRNNSLSGSIN-LNFTGFTDLCVLDLASNHFS-GPLPDSLGHCPKMKILSLAKNE 363          

HSP 2 Score: 30.0314 bits (66), Expect = 1.656e-11
Identity = 22/81 (27.16%), Postives = 39/81 (48.15%), Query Frame = 1
Query:  538 IDLSENEISGG-PVELLNRTDYLVEFRASGSKLKFN--MDSLRIVKTLKVLDLSRNLVFGKLPKAISGLDKLNVSFNNLCG 771
            + L++NE  G  P    N    L    ++ S + F+  M+ L+  + L  L LS+N +  ++P  ++G D L +     CG
Sbjct:  357 LSLAKNEFRGKIPDTFKNLQSLLFLSLSNNSFVDFSETMNVLQHCRNLSTLILSKNFIGEEIPNNVTGFDNLAILALGNCG 437          
BLAST of CX069769 vs. ExPASy Swiss-Prot
Match: Y5332_ARATH (Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.844e-11
Identity = 43/134 (32.09%), Postives = 68/134 (50.75%), Query Frame = 2
Query:    5 ISQLKNLTYLDLQHNQLSGAIPDIXXXXXXXXXXXXXXXXXXGNIPTSIASLAPQLQYLELGHNVLSGKVPDFLGKFHSLDTLDLSWNQFSGTLPKSFSNLTKIFNLNLAYNSLTDPFPVMNVKGIESLDLSYN 406
            I++L NL +L L  N +SG  P                        T++ +L   L  L+L  N  SG +P  L  +  L  LDLS N+F+G++P S   LT + +LNLAYN  +   P +++ G++ L+L++N
Sbjct:   86 IARLSNLRFLILSSNNISGTFP------------------------TTLQALK-NLTELKLDFNEFSGPLPSDLSSWERLQVLDLSNNRFNGSIPSSIGKLTLLHSLNLAYNKFSGEIPDLHIPGLKLLNLAHN 194          
BLAST of CX069769 vs. ExPASy Swiss-Prot
Match: PGIP_PYRCO (Polygalacturonase inhibitor OS=Pyrus communis GN=PGIP PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.409e-11
Identity = 43/115 (37.39%), Postives = 65/115 (56.52%), Query Frame = 1
Query:  538 IDLSENEISGGPVEL--LNRTDYLVEFRASGSKLKFNMDSLRIVKTLKVLDLSRNLVFGKLPKAISGLD--KLNVSFNNLCGEIP----KTKFPASAFVGNECLCGPPLPSSSCK 858
            IDLS N++ G    +  LN+T  +V+   S + L+FN+  +    +L  LD++ N ++G +P   + L+   LNVS+N LCG+IP       F   ++  N CLCG PLP  SCK
Sbjct:  220 IDLSRNKLEGDASVIFGLNKTTQIVDL--SRNLLEFNLSKVEFPTSLTSLDINHNKIYGSIPVEFTQLNFQFLNVSYNRLCGQIPVGGKLQSFDEYSYFHNRCLCGAPLP--SCK 330          
BLAST of CX069769 vs. ExPASy Swiss-Prot
Match: LRC40_CHICK (Leucine-rich repeat-containing protein 40 OS=Gallus gallus GN=LRRC40 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 3.675e-11
Identity = 53/161 (32.92%), Postives = 79/161 (49.07%), Query Frame = 2
Query:    5 ISQLKNLTYLDLQHNQLSGAIPDIXXXXXXXXXXXXXXXXXXGNIPTSIASLAPQLQYLELGHNVLSGKVPDFLGKFHSLDTLDLSWNQFSGTLPKSFSNLTKIFNLNLAYNSLTD-PFPVMNVKGIESLDLSYNQFHLQQIPSWVTSSPIIFSLKLAKSE 484
            + QL+NL  LD+ HN+L                          +IP  +  L+  L+ L L HN LS  +PD  G+  SL+ LDLS N  +  +PKSF+ L  +  LNLA N L D P  +  +K +  LD + N  +L+ +PS + S   +  L L K++
Sbjct:  124 LGQLENLQKLDVSHNKLK-------------------------SIPEELLQLS-HLKGLLLQHNELS-HLPDGFGQLVSLEELDLSNNHLTD-IPKSFALLINLVRLNLACNQLKDLPADISAMKSLRQLDCTKN--YLESVPSELASMASLEQLYLRKNK 254          

HSP 2 Score: 26.1794 bits (56), Expect = 3.675e-11
Identity = 18/65 (27.69%), Postives = 32/65 (49.23%), Query Frame = 1
Query:  550 ENEISGGPVELLNRTDYLVEFRASGSKLKFNMDSLRIVKTLKVLDLSRNLVFGKLPKAISGLDKL 744
            EN+I     E L   + L       +K+K   D + +++ L+ LDL+ N +  +LP  +  L +L
Sbjct:  274 ENQIEILNAENLKHLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDI-SRLPYTLGNLSQL 337          
BLAST of CX069769 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.366e-11
Identity = 38/116 (32.76%), Postives = 58/116 (50.00%), Query Frame = 2
Query:   14 LKNLTYLDLQHNQLSGAIPDIXXXXXXXXXXXXXXXXXXGNIPTSIASLAPQLQYLELGHNVLSGKVPDFLGKFHSLDTLDLSWNQFSGTLPKSFSNLTKIFNLNLAYNSLTDPFP 361
            L NL +LDL  N+  G I +I                  G I +S     P L  L+LG+N  SG++P  + +  SL  L L++N FSG +P+ + N+  +  L+L++N LT   P
Sbjct:  323 LTNLVFLDLSRNKFGGDIQEIFGRFTQVKYLVLHANSYVGGINSSNILKLPNLSRLDLGYNNFSGQLPTEISQIQSLKFLILAYNNFSGDIPQEYGNMPGLQALDLSFNKLTGSIP 438          
BLAST of CX069769 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.366e-11
Identity = 47/153 (30.72%), Postives = 75/153 (49.02%), Query Frame = 2
Query:    5 ISQLKNLTYLDLQHNQLSGAIPDIXXXXXXXXXXXXXXXXXXGNIPTSIASLAPQLQYLELGHNVLSGKVPDFLGKFHSLDTLDLSWNQFSGTLP-KSFSNLTKIFNLNLAYNSLTDPFP--VMNVKGIESLDLSYNQFHLQQIPSWVTSSPI 454
            +S    L++L+L +NQ  G +P +                  G  P  +A L   +  L+L +N  SG VP+ LG+  SL+ +D+S+N FSG LP  + S L+ I  + L++N      P    N+  +E+LD+S N      IPS +   P+
Sbjct:  277 LSSCGKLSFLNLTNNQFVGLVPKLPSESLQYLYLRGNDFQ--GVYPNQLADLCKTVVELDLSYNNFSGMVPESLGECSSLELVDISYNNFSGKLPVDTLSKLSNIKTMVLSFNKFVGGLPDSFSNLLKLETLDMSSNNL-TGVIPSGICKDPM 426          
The following BLAST results are available for this feature:
BLAST of CX069769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
EFR_ARATH7.572e-1237.11LRR receptor-like serine/threonine-protein kinase ... [more]
SRF6_ARATH8.279e-1231.76Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
RPK2_ARATH8.279e-1235.96LRR receptor-like serine/threonine-protein kinase ... [more]
BRL2_ARATH9.804e-1229.88Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
PSKR2_ARATH1.656e-1129.56Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
Y5332_ARATH1.844e-1132.09Probable inactive receptor kinase At5g53320 OS=Ara... [more]
PGIP_PYRCO2.409e-1137.39Polygalacturonase inhibitor OS=Pyrus communis GN=P... [more]
LRC40_CHICK3.675e-1132.92Leucine-rich repeat-containing protein 40 OS=Gallu... [more]
Y1743_ARATH5.366e-1132.76Probable LRR receptor-like serine/threonine-protei... [more]
BRI1_SOLLC5.366e-1130.72Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12F10_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12F10-L20-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069769 ID=CX069769; Name=CX069769; organism=Citrus sinensis; type=EST; length=866bp
CGGAATCAGCCAGCTCAAGAACTTGACTTACTTAGATCTCCAGCACAACC
AGCTTTCTGGAGCCATACCTGATATTTTCTCATCACTCAAAAAACTTTTA
TTTCTTAAACTTTCATTCAACAAATTTTCCGGGAATATTCCTACATCAAT
AGCTTCACTGGCACCCCAGCTGCAATATCTGGAGCTAGGCCACAATGTCC
TGTCCGGAAAGGTCCCAGATTTTCTCGGAAAATTCCATTCTCTAGACACG
CTGGATCTTTCCTGGAATCAGTTTTCAGGAACTTTGCCAAAGAGTTTCAG
CAATCTCACCAAGATTTTCAATCTCAATCTCGCTTACAATTCTCTCACAG
ACCCATTTCCTGTAATGAACGTTAAAGGAATTGAGTCGCTTGACTTGTCA
TACAACCAATTTCATCTCCAACAAATTCCCAGTTGGGTCACTTCATCTCC
GATTATTTTTTCTCTCAAGCTGGCCAAATCGGAATCAAAATGAACCTGAA
CAACTGGAAGCCGGCTCAGACTTACTTTTACGACTACATTGATCTGTCCG
AAAACGAAATATCGGGGGGTCCGGTTGAGTTGCTGAACCGGACAGATTAC
TTGGTGGAGTTTCGGGCCTCAGGCAGCAAGTTGAAGTTCAACATGGACAG
TTTGAGGATTGTGAAGACATTGAAGGTCTTGGATTTGTCGAGAAATTTGG
TTTTCGGGAAACTGCCAAAGGCAATATCAGGACTTGATAAATTGAACGTG
AGCTTTAATAATTTGTGTGGTGAGATTCCAAAAACGAAATTTCCGGCCAG
TGCTTTTGTGGGCAACGAGTGTCTCTGTGGTCCTCCATTGCCATCATCGT
CATGCAAGTGCGTTTG
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