CX069768

Overview
NameCX069768
Unique NameCX069768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12452 contig Csv1_Contig12452:185..937. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1544_PARUW (Uncharacterized RNA methyltransferase pc1544 OS=Protochlamydia amoebophila (strain UWE25) GN=pc1544 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.083e-30
Identity = 77/179 (43.02%), Postives = 104/179 (58.10%), Query Frame = -2
Query:  219 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFP-KPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLEL 752
            Q NT QAE LY      A L    S +V DL+CGTGT+G+  A++VK V G E+  +++ DA  N K N +SN T   GD+ ++          KPD+V+ DP R G+  K IK +L LKAP++VY+SCNP T   +L  L        I G Y+L+ +QPVD FP T H+E + LL L
Sbjct:  273 QPNTEQAEKLYSQALKLADL--SASHVVYDLYCGTGTLGICSAKYVKEVIGIELSRESVLDARENVKENGLSNVTIKSGDVGQVLEALSQENSLKPDVVMVDPPRIGLDAKAIKHILDLKAPKLVYISCNPKTQVMNLGPL--------IDGGYQLQIVQPVDQFPQTVHVENITLLTL 441          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1582_STAES (Uncharacterized RNA methyltransferase SE_1582 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1582 PE=3 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.415e-30
Identity = 80/175 (45.71%), Postives = 97/175 (55.43%), Query Frame = -2
Query:  228 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCL 752
            Q N+ Q E LY+   + A L G   +IVLD +CG GTIGL +A   KHVYG EVVPQAI DA  NA  N + N TF  G    +   + +   KPD+V+ DP R G     +  LLKL   RIVY+SCNP+T  RD   L            Y+L  + PVDMFP T HIE V L
Sbjct:  286 QINSSQTEKLYQQALNYAQLTG--KEIVLDTYCGIGTIGLYMAPLAKHVYGVEVVPQAIKDAEDNATKNQLKNTTFECGKAEDVILTWKSQGIKPDVVMVDPPRKGCDETFLTTLLKLNPKRIVYISCNPSTQQRDAQILAEQ---------YELVEITPVDMFPQTTHIETVAL 449          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1727_LISMF (Uncharacterized RNA methyltransferase LMOf2365_1727 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=LMOf2365_1727 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.413e-30
Identity = 76/178 (42.70%), Postives = 103/178 (57.87%), Query Frame = -2
Query:  219 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLEL 752
            Q N  Q E LY+ +E    L G  S+ ++D +CG GTIG   A  VK V G +++P++I DA RNA+ N I N  +  G    +   + N   +PD VI DP R G    LIK LL ++A ++VYVSCNP+T ARDL  L            Y+++ +QPVDMFP T H+E V LL+L
Sbjct:  290 QLNPFQTERLYQEVEKALVLTG--SETLVDAYCGVGTIGQAFAGKVKEVRGMDIIPESIEDAKRNAEKNGIENVYYEVGKAEDVLPKWVNEGFRPDAVIVDPPRSGCDQGLIKSLLDVEAKQLVYVSCNPSTLARDLALLAKK---------YRIRYMQPVDMFPQTAHVETVVLLQL 456          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1151_LACPL (Uncharacterized RNA methyltransferase lp_1151 OS=Lactobacillus plantarum GN=lp_1151 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.413e-30
Identity = 75/177 (42.37%), Postives = 100/177 (56.50%), Query Frame = -2
Query:  222 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLE 752
            Q N  Q E LY+L  D AGL G+  + V+D + G GTI LT+A+  K VYG E+VP AI +A +NA  N I+NATFV     K    +     KPD+++ DP R G+    IK   ++   R+VY+SCNP+T  RD+             G +    +QPVD FP TPHIE V +LE
Sbjct:  287 QVNPQQTEKLYQLAIDQAGLTGN--ETVIDAYSGIGTISLTMAQHAKQVYGVEIVPAAIDNARQNADKNGITNATFVLDSAEKAMAKWQADGVKPDVIVVDPPRKGLDADFIKSAGEMAPKRVVYISCNPSTLVRDVQRFAE-------YGYHISAPVQPVDQFPQTPHIESVTVLE 454          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y2114_CLOPE (Uncharacterized RNA methyltransferase CPE2114 OS=Clostridium perfringens GN=CPE2114 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.375e-30
Identity = 73/176 (41.48%), Postives = 102/176 (57.95%), Query Frame = -2
Query:  225 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLL 752
            QTN+  AE LY ++ D  G   +  K+V DL+CGTGTIG   A     V G E++ +A   A  NAKLN ++N  F+ GD+ ++         KPDI+I DP R G+H K + +++K  AP+I+YVSCNP T   DL  L         KG Y+++    +DMFP+TPH+E V  L
Sbjct:  286 QTNSLGAEKLYSIVRDFMGAADN--KVVFDLYCGTGTIGQIAAGKASKVIGIELIEEAAMAANENAKLNGLNNCNFIAGDVAEV---IKTVKDKPDIIILDPPRSGVHPKALDYVIKFNAPQIIYVSCNPKTLVTDLKVL-------ETKG-YEIEKTLLMDMFPNTPHVETVVKL 448          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1797_THETN (Uncharacterized RNA methyltransferase TTE1797 OS=Thermoanaerobacter tengcongensis GN=TTE1797 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.375e-30
Identity = 73/179 (40.78%), Postives = 107/179 (59.78%), Query Frame = -2
Query:  216 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLELS 752
            QTN++ AE +Y  + + AG     +K + DL+CGTGTIG+ +A   + V G E+V +A+  A  NA LN + NA F+ GD++K          KPDIV+ DP R G++ K ++ ++  +  +I+YVSCNP + ARDL            KG Y +K ++ +DMFPHT H+E V LLE S
Sbjct:  285 QTNSYGAERIYSTVREFAG--DVSNKTIFDLYCGTGTIGIVMAPLARKVIGIELVEEAVFSAKENAALNGLENAVFIAGDVSK---KLREIKEKPDIVVVDPPRSGVNPKALEDIVNFEPEKIIYVSCNPESFARDLRLFVD-------KG-YAVKKVKAIDMFPHTYHVELVGLLEKS 450          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y367_CLOPE (Uncharacterized RNA methyltransferase CPE0367 OS=Clostridium perfringens GN=CPE0367 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.169e-30
Identity = 78/176 (44.32%), Postives = 101/176 (57.39%), Query Frame = -2
Query:  225 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLL 752
            Q N  Q EVLY    + A L G+    V D +CGTGTI L L++  K VYG E++PQAI +A  NAK N + N  F  G+   +  D  N   K D+V+ DP R G   KL+  +  + A +IVYVSC+P+T  RDL  L     ++N    YK   +QPVDMFP+T HIE V LL
Sbjct:  287 QVNPIQTEVLYGKALEYANLTGNEE--VFDAYCGTGTITLFLSQKAKKVYGVEIIPQAIDNAWINAKENKVENVEFFVGESEVVIPDLINKGVKADVVVVDPPRKGCDKKLLDAITNIDAKKIVYVSCDPSTLGRDLKVL-----EEN---GYKTLEVQPVDMFPNTAHIENVALL 452          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1435_STAEQ (Uncharacterized RNA methyltransferase SERP1435 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP1435 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.169e-30
Identity = 79/175 (45.14%), Postives = 96/175 (54.86%), Query Frame = -2
Query:  228 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCL 752
            Q N+ Q E LY+   + A L G   +IVLD +CG GTIGL +A   KHVYG EVVPQAI DA  NA  N + N TF  G    +   + +   KP +V+ DP R G     +  LLKL   RIVY+SCNP+T  RD   L            Y+L  + PVDMFP T HIE V L
Sbjct:  286 QINSSQTEKLYQQALNYAQLTG--KEIVLDTYCGIGTIGLYMAPLAKHVYGVEVVPQAIKDAEDNATKNQLKNTTFECGKAEDVILTWKSQGIKPGVVMVDPPRKGCDETFLTTLLKLNPKRIVYISCNPSTQQRDAQILAEQ---------YELVEITPVDMFPQTTHIETVAL 449          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1435_CLOAB (Uncharacterized RNA methyltransferase CA_C1435 OS=Clostridium acetobutylicum GN=CA_C1435 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.169e-30
Identity = 74/178 (41.57%), Postives = 105/178 (58.99%), Query Frame = -2
Query:  222 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYL-CHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLE 752
            QTN+  AE LY  + +  G     +K V DL+CGTGTIG   ++  + V G E++ +A+  A  N KLNNISN +F+ GD+ K+  +      KPD +I DP RPG+    +K+++K  AP IVYVSCNP T   DL  L  +G         Y+++ ++ VDMFP T H+E V LL+
Sbjct:  289 QTNSKGAEKLYSEVLEFLG--DVSNKTVFDLYCGTGTIGQLASKKAEKVIGIELIEEAVEAAKENTKLNNISNCSFIAGDVAKVITEIKE---KPDTIILDPPRPGVSPNAMKYVIKFNAPEIVYVSCNPKTLVNDLGVLRAYG---------YEVEKVKIVDMFPGTGHVETVVLLQ 452          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1703_LISMO (Uncharacterized RNA methyltransferase lmo1703 OS=Listeria monocytogenes GN=lmo1703 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.198e-29
Identity = 75/178 (42.13%), Postives = 102/178 (57.30%), Query Frame = -2
Query:  219 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLEL 752
            Q N  Q E LY+ +E    L G  S+ ++D +CG GTIG   A  VK V G +++P++I DA RNA+ N I N  +  G    +   +     +PD VI DP R G    LIK LL ++A ++VYVSCNP+T ARDL  L            Y+++ +QPVDMFP T H+E V LL+L
Sbjct:  290 QLNPFQTERLYQEVEKALVLTG--SETLVDAYCGVGTIGQAFAGKVKEVRGMDIIPESIEDAKRNAEKNGIENVYYEVGKAEDVLPKWVKEGFRPDAVIVDPPRSGCDQGLIKSLLDVEAKQLVYVSCNPSTLARDLALLAKK---------YRIRYMQPVDMFPQTAHVETVVLLQL 456          
The following BLAST results are available for this feature:
BLAST of CX069768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
Y1544_PARUW1.083e-3043.02Uncharacterized RNA methyltransferase pc1544 OS=Pr... [more]
Y1582_STAES1.415e-3045.71Uncharacterized RNA methyltransferase SE_1582 OS=S... [more]
Y1727_LISMF2.413e-3042.70Uncharacterized RNA methyltransferase LMOf2365_172... [more]
Y1151_LACPL2.413e-3042.37Uncharacterized RNA methyltransferase lp_1151 OS=L... [more]
Y2114_CLOPE5.375e-3041.48Uncharacterized RNA methyltransferase CPE2114 OS=C... [more]
Y1797_THETN5.375e-3040.78Uncharacterized RNA methyltransferase TTE1797 OS=T... [more]
Y367_CLOPE9.169e-3044.32Uncharacterized RNA methyltransferase CPE0367 OS=C... [more]
Y1435_STAEQ9.169e-3045.14Uncharacterized RNA methyltransferase SERP1435 OS=... [more]
Y1435_CLOAB9.169e-3041.57Uncharacterized RNA methyltransferase CA_C1435 OS=... [more]
Y1703_LISMO1.198e-2942.13Uncharacterized RNA methyltransferase lmo1703 OS=L... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12F09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12F09-L18-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069768 ID=CX069768; Name=CX069768; organism=Citrus sinensis; type=EST; length=753bp
GCTAATTAGACCGAATCAATCGAATTTCCAATTTTCAAATACTGTGTTTT
CTGCATGAATGAAGCTACAATTCAAAGAAATATAATCATGTAGCTGGAAA
TCACCCATCCAGATGTACAAATTAAAGATTACTGTCAGTTGGACCAGGAA
TAGCTTGGGCCCCTGCCAACCTAGTAGGAGTGCAGCAGCTAGCTTGGAAT
TGCAGCTTAAGGTCAAGAAAGTTCAAGTAGGCATACACATTCGATATGAG
GAGTGTGAGGGAACATATCTACTGGTTGTAAACTTTTTAGTTTATAACAT
CCCTTTATGTTTTGATCTCCCACACCATGACAAAGGTAATCAAGGTCACG
TGCACACGTGGCCGGATTACACGATACATAAACAATGCGTGGTGCCTTCA
GCTTTAGTAGGAACTTGATCAATTTCATGTGCATACCAGGGCGGTTTGGA
TCTGAAATGACAATGTCTGGCTTTGGAAAAGCATTGCCAAAATCTCCACC
AATTTTGTTGAGATCCCCTTGAACAAAAGTAGCATTAGAAATATTGTTCA
ACTTTGCATTTCTACAAGCATCTGATATAGCTTGAGGAACTACTTCATAT
CCATAAACATGTTTAACCCATCTTGCAAGTGTTAAACCAATGGTACCGGT
TCCACAAAATAGGTCAAGCACAATCTTGGAGCCATCACCTCTGAGACCAG
CACAATCTTCAATGAGTTTATAAAGAACCTCTGCCTGGTGAGTATTTGTC
TGG
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