CX069768

Overview
NameCX069768
Unique NameCX069768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y2481_CLOTE (Uncharacterized RNA methyltransferase CTC_02481 OS=Clostridium tetani GN=CTC_02481 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.668e-29
Identity = 74/176 (42.05%), Postives = 103/176 (58.52%), Query Frame = -2
Query:  225 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLL 752
            Q N  Q EVLY    + A L+GD  ++V D +CGTGTI L L++  K VYG E+V +AI  A  NA+ NN+ N  F+ G+  +I  +      K D+V+ DP R G    L++ + K+   +IVYVSC+PAT ARDL  L   +G       YK   +QPVDMF +T H+E + L+
Sbjct:  287 QVNPIQTEVLYNKALEYADLKGD--EVVFDAYCGTGTISLFLSQKAKKVYGVEIVNEAIESAKLNARENNVDNVDFIVGESEQIIPELIEKGIKADVVVVDPPRKGCEKSLLEAMAKMAPEKIVYVSCDPATLARDLGVL-EELG-------YKTMKVQPVDMFSNTYHVETIILM 452          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1815_LISIN (Uncharacterized RNA methyltransferase lin1815 OS=Listeria innocua GN=lin1815 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.668e-29
Identity = 74/177 (41.81%), Postives = 102/177 (57.63%), Query Frame = -2
Query:  222 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLE 752
            Q N  Q E LY+ +E    L G  S+ ++D +CG GTIG   A  VK V G +++P++I DA RNA+ N I N  +  G    +   +     +PD VI DP R G    LIK LL+++A ++VYVSCNP+T ARDL  L            Y+++ +QPVDMFP T H+E V LL+
Sbjct:  290 QLNPFQTERLYQEVEKALVLTG--SETLVDAYCGVGTIGQAFAGKVKEVRGMDIIPESIEDAKRNAEKNGIDNVYYEVGKAEDVLPKWVKEGFRPDAVIVDPPRSGCDQGLIKSLLQVEAKQLVYVSCNPSTLARDLALLAKK---------YQIRYMQPVDMFPQTAHVETVTLLQ 455          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y932_STRR6 (Uncharacterized RNA methyltransferase spr0932 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=spr0932 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.484e-29
Identity = 74/176 (42.05%), Postives = 106/176 (60.23%), Query Frame = -2
Query:  225 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLL 752
            Q NT  AE LY+   D A L+ D   +V+D + G GTIGL++A+ VK VYG E++P+A+ ++ +NA+LNNISNA +V         ++     +P +++ DP R G+    IK   +  A RI Y+SCN AT ARD+  L   +G       Y+LK +QPVD+FP T H+E V LL
Sbjct:  283 QVNTEMAEKLYQTAIDFAELKKDD--VVIDAYSGIGTIGLSVAKHVKEVYGVELIPEAVENSKKNAQLNNISNAHYVCDTAENAMKNWLKDGIQPTVILVDPPRKGLTESFIKASAQTGADRIAYISCNVATMARDIK-LYQELG-------YELKKVQPVDLFPQTHHVETVALL 448          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y924_DESVH (Uncharacterized RNA methyltransferase DVU_0924 OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=DVU_0924 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.551e-29
Identity = 77/179 (43.02%), Postives = 100/179 (55.87%), Query Frame = -2
Query:  225 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKI--GGDFGNAF-PKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLL 752
            QTNT   E+LY  +E  AGL   G + V DL+CG G+I L LA     + G E  P ++  A RNA+    ++  FV GD+  +      G A  P PD+V++DP R GMH  +I  LL+    RIVYVSC+PAT ARD+  L            Y L   +PVD+FPHTPH+E V LL
Sbjct:  288 QTNTRATELLYGEVERMAGL--SGREHVWDLYCGVGSIALWLAEHAATICGMEATPASVEAAQRNAQAAGCTHCDFVAGDVRALLRSRSKGKAQEPIPDVVVTDPPRAGMHPDVIDALLQTAPARIVYVSCDPATMARDVGLLMQR---------YTLHEARPVDLFPHTPHVETVVLL 455          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y788_STRMU (Uncharacterized RNA methyltransferase SMU_788 OS=Streptococcus mutans GN=SMU_788 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.551e-29
Identity = 74/176 (42.05%), Postives = 101/176 (57.39%), Query Frame = -2
Query:  225 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLL 752
            Q NT  AE LY+   D + L  D +  V+D + G GTIGL+ A+ VK VYG EV+  A+ DA +NA LNNI+N  +V     K    +     KPD+++ DP R G+    I+    ++  +I Y+SC PAT ARD+  L   +G       YKL  +QPVD+FP T H+ECV LL
Sbjct:  283 QVNTVMAEKLYQTAIDFSDLTPDDT--VIDAYSGIGTIGLSFAKKVKDVYGVEVIEAAVRDAEKNAALNNITNVHYVADSAEKAMASWSKRGIKPDVILVDPPRKGLTESFIEASTAMQPRKITYISCAPATMARDVK-LYEELG-------YKLVKVQPVDLFPQTHHVECVALL 448          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y633_STRA5 (Uncharacterized RNA methyltransferase SAG0633 OS=Streptococcus agalactiae serotype V GN=SAG0633 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.551e-29
Identity = 74/176 (42.05%), Postives = 101/176 (57.39%), Query Frame = -2
Query:  225 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLL 752
            Q NT  AE LY+   D + L  +   IV+D + G GTIGL++A+ VKHVYG EVV +A+SDA  NA  N I+N+T+V          +     KP +++ DP R G+    +    + KA +I Y+SCN AT ARD+  L   +G       Y L  +QPVD+FP T H+ECV LL
Sbjct:  283 QVNTEMAEKLYQKAIDFSDLNSED--IVIDAYSGIGTIGLSVAKQVKHVYGVEVVEKAVSDAKENATRNGITNSTYVADSAENAMAKWLKEGIKPTVIMVDPPRKGLTESFVYSAAQTKADKITYISCNSATMARDIK-LFEELG-------YHLVKIQPVDLFPMTHHVECVALL 448          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y613_STRA3 (Uncharacterized RNA methyltransferase gbs0613 OS=Streptococcus agalactiae serotype III GN=gbs0613 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.551e-29
Identity = 74/176 (42.05%), Postives = 101/176 (57.39%), Query Frame = -2
Query:  225 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLL 752
            Q NT  AE LY+   D + L  +   IV+D + G GTIGL++A+ VKHVYG EVV +A+SDA  NA  N I+N+T+V          +     KP +++ DP R G+    +    + KA +I Y+SCN AT ARD+  L   +G       Y L  +QPVD+FP T H+ECV LL
Sbjct:  283 QVNTEMAEKLYQKAIDFSDLNSED--IVIDAYSGIGTIGLSVAKQVKHVYGVEVVEKAVSDAKENATRNGITNSTYVADSAENAMAKWLKEGIKPTVIMVDPPRKGLTESFVYSAAQTKADKITYISCNSATMARDIK-LFEELG-------YHLVKIQPVDLFPMTHHVECVALL 448          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: YLJE_LACLA (Uncharacterized RNA methyltransferase yljE OS=Lactococcus lactis subsp. lactis GN=yljE PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.031e-28
Identity = 76/175 (43.43%), Postives = 101/175 (57.71%), Query Frame = -2
Query:  234 QTNTHQAEVLYKLIEDCAGLR-GDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARD-LDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 752
            Q NT QAE LY+   + AGL+ GD   +V+D + G GTIG+++A  V  VYG EVVP A+ +A RNA+LN + N  +  G   KI   + +   KPD++  DP R G+    IK    +   RIVY+SCNPAT ARD + +   G         Y L  +QPVD+FP T HIE V
Sbjct:  292 QVNTPQAEKLYETAYEFAGLKPGD---VVIDAYSGIGTIGISMADRVAKVYGMEVVPAAVENAKRNAQLNELENTHYEVGTAEKIMPKWLSEGIKPDVIFVDPPRKGLDEGFIKAAAMMNPRRIVYISCNPATFARDVVRFEADG---------YLLDKVQPVDLFPQTHHIELV 454          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y426_BACAN (Uncharacterized RNA methyltransferase BA_0426/GBAA_0426/BAS0414 OS=Bacillus anthracis GN=BA_0426 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.571e-28
Identity = 69/178 (38.76%), Postives = 103/178 (57.87%), Query Frame = -2
Query:  219 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLEL 752
            Q N  Q  VLY   +  A L G+    ++D +CG GTIGL LA     V G +V+P+AI+DA +NAK +  +N  +  G   +    +     +PD+++ DP R G   KL++ +LK+K  ++VYVSCNP++ ARD+         Q +   Y+++ +QPVDMFPHT H+E V  L L
Sbjct:  292 QLNPEQTVVLYNEAKKAAALTGNEK--IVDAYCGVGTIGLWLANDAAEVRGMDVIPEAIADARKNAKRHGFTNTKYEAGKAEQWLPKWVKEGWRPDVIVVDPPRTGCDDKLLETILKVKPKQVVYVSCNPSSLARDV---------QALMKSYEVEYVQPVDMFPHTAHVENVVKLTL 458          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1812_THETN (Uncharacterized RNA methyltransferase TTE1812 OS=Thermoanaerobacter tengcongensis GN=TTE1812 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.571e-28
Identity = 71/177 (40.11%), Postives = 101/177 (57.06%), Query Frame = -2
Query:  222 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLE 752
            Q N  Q E+LY    + AGL G   ++V+D++ G GTI L  A+    VYG E V +A+ DA +NA++N + N  F+ G   +          K ++VI DP R G   ++I+ ++ +   RIVYVSCNP+T ARDL YL    G       Y+   +QPVDMFP+T H+E V L+E
Sbjct:  284 QVNPIQTEILYDKAIEYAGLTG--KEVVIDVYSGIGTISLFAAKKASFVYGIESVKEAVEDAEKNAQVNGVKNVKFIWGKAEREIAKLYKEGVKAEVVIVDPPRDGCDKEVIRAIVGINPKRIVYVSCNPSTLARDLRYL-EDAG-------YRTVEVQPVDMFPYTYHVESVALVE 450          
The following BLAST results are available for this feature:
BLAST of CX069768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
Y2481_CLOTE2.668e-2942.05Uncharacterized RNA methyltransferase CTC_02481 OS... [more]
Y1815_LISIN2.668e-2941.81Uncharacterized RNA methyltransferase lin1815 OS=L... [more]
Y932_STRR63.484e-2942.05Uncharacterized RNA methyltransferase spr0932 OS=S... [more]
Y924_DESVH4.551e-2943.02Uncharacterized RNA methyltransferase DVU_0924 OS=... [more]
Y788_STRMU4.551e-2942.05Uncharacterized RNA methyltransferase SMU_788 OS=S... [more]
Y633_STRA54.551e-2942.05Uncharacterized RNA methyltransferase SAG0633 OS=S... [more]
Y613_STRA34.551e-2942.05Uncharacterized RNA methyltransferase gbs0613 OS=S... [more]
YLJE_LACLA5.031e-2843.43Uncharacterized RNA methyltransferase yljE OS=Lact... [more]
Y426_BACAN6.571e-2838.76Uncharacterized RNA methyltransferase BA_0426/GBAA... [more]
Y1812_THETN6.571e-2840.11Uncharacterized RNA methyltransferase TTE1812 OS=T... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12F09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12F09-L18-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069768 ID=CX069768; Name=CX069768; organism=Citrus sinensis; type=EST; length=753bp
GCTAATTAGACCGAATCAATCGAATTTCCAATTTTCAAATACTGTGTTTT
CTGCATGAATGAAGCTACAATTCAAAGAAATATAATCATGTAGCTGGAAA
TCACCCATCCAGATGTACAAATTAAAGATTACTGTCAGTTGGACCAGGAA
TAGCTTGGGCCCCTGCCAACCTAGTAGGAGTGCAGCAGCTAGCTTGGAAT
TGCAGCTTAAGGTCAAGAAAGTTCAAGTAGGCATACACATTCGATATGAG
GAGTGTGAGGGAACATATCTACTGGTTGTAAACTTTTTAGTTTATAACAT
CCCTTTATGTTTTGATCTCCCACACCATGACAAAGGTAATCAAGGTCACG
TGCACACGTGGCCGGATTACACGATACATAAACAATGCGTGGTGCCTTCA
GCTTTAGTAGGAACTTGATCAATTTCATGTGCATACCAGGGCGGTTTGGA
TCTGAAATGACAATGTCTGGCTTTGGAAAAGCATTGCCAAAATCTCCACC
AATTTTGTTGAGATCCCCTTGAACAAAAGTAGCATTAGAAATATTGTTCA
ACTTTGCATTTCTACAAGCATCTGATATAGCTTGAGGAACTACTTCATAT
CCATAAACATGTTTAACCCATCTTGCAAGTGTTAAACCAATGGTACCGGT
TCCACAAAATAGGTCAAGCACAATCTTGGAGCCATCACCTCTGAGACCAG
CACAATCTTCAATGAGTTTATAAAGAACCTCTGCCTGGTGAGTATTTGTC
TGG
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