CX069768

Overview
NameCX069768
Unique NameCX069768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1029_STRPN (Uncharacterized RNA methyltransferase SP_1029 OS=Streptococcus pneumoniae GN=SP_1029 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.582e-28
Identity = 71/176 (40.34%), Postives = 103/176 (58.52%), Query Frame = -2
Query:  225 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLL 752
            Q NT  AE LY+   D A L+ D   +++D + G GTIGL++A+ VK VYG E++P+A+ ++ +NA LN I+NA +V          +     +P +++ DP R G+    IK   +  A RI Y+SCN AT ARD+  L   +G       Y+LK +QPVD+FP T H+E V LL
Sbjct:  283 QVNTEMAEKLYQTAIDFAELKKDD--VIIDAYSGIGTIGLSVAKHVKEVYGVELIPEAVENSQKNASLNKITNAHYVCDTAENAMKKWLKEGIQPTVILVDPPRKGLTESFIKASAQTGADRIAYISCNVATMARDIK-LYQELG-------YELKKVQPVDLFPQTHHVETVALL 448          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y542_BACC1 (Uncharacterized RNA methyltransferase BCE_0542 OS=Bacillus cereus (strain ATCC 10987) GN=BCE_0542 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.464e-27
Identity = 68/176 (38.64%), Postives = 102/176 (57.95%), Query Frame = -2
Query:  225 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLL 752
            Q N  Q  VLY   +  A L G+    ++D +CG GTIGL LA     V G +V+P+AI+DA +NAK +  +N  +  G   +    +     +PD+++ DP R G   KL++ +LK+K  ++VYVSCNP++ ARD+         Q +   Y+++ +QPVDMFPHT H+E V  L
Sbjct:  292 QLNPEQTVVLYNEAKKAAALTGNEK--IVDAYCGVGTIGLWLANDAAEVRGMDVIPEAIADARKNAKRHGFTNTKYEAGKAEQWLPKWVKEGWRPDVIVVDPPRTGCDDKLLETILKVKPKQVVYVSCNPSSLARDV---------QALMKSYEVEYVQPVDMFPHTAHVENVVKL 456          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y885_CHLPN (Uncharacterized RNA methyltransferase CPn_0885/CP_0981/CPj0885/CpB0914 OS=Chlamydia pneumoniae GN=CPn_0885 PE=3 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.912e-27
Identity = 61/155 (39.35%), Postives = 96/155 (61.94%), Query Frame = -2
Query:  222 DGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLE 686
            +GS+ +LDL+CG GTIG+ L+ +VK+V G E++P A++ A  N K NN  +   V  +  K           PD++I DP R GM  K++K++L++ +P+IVY+SCNP T  ++   L        I G Y++K +QP+D FP++ H+E + LLE
Sbjct:  250 EGSETLLDLYCGAGTIGIMLSPYVKNVIGVEIIPDAVASAQENIKANNKEDCVEVYLEDAKAFCKRNENCKAPDVIIIDPPRCGMQSKVLKYILRIGSPKIVYISCNPKTQFQECADL--------ISGGYRIKKMQPIDQFPYSTHLENIILLE 396          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1360_STRP8 (Uncharacterized RNA methyltransferase spyM18_1360 OS=Streptococcus pyogenes serotype M18 GN=spyM18_1360 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.912e-27
Identity = 75/177 (42.37%), Postives = 98/177 (55.37%), Query Frame = -2
Query:  225 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLD-YLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLL 752
            Q NT  AE LY+     + L  D   IV+D + G GTIGL+ A+ VK VYG EV+  A+ DA +NA LN I+NA FV          +     KP +++ DP R G+    I+  + +   +I YVSCNPAT ARD+  Y   G         YKL  +QPVD+FP T H+ECV LL
Sbjct:  294 QVNTVMAEKLYQTAIAFSDLSKDD--IVIDAYSGIGTIGLSFAKTVKAVYGVEVIEAAVRDAQQNAALNGITNAYFVADTAEHAMATWAKDGIKPSVILVDPPRKGLTESFIQASVAMGPQKITYVSCNPATMARDIKRYQELG---------YKLAKVQPVDLFPQTHHVECVVLL 459          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1346_STRP1 (Uncharacterized RNA methyltransferase SPy_1346/M5005_Spy1098 OS=Streptococcus pyogenes serotype M1 GN=SPy_1346 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.912e-27
Identity = 75/177 (42.37%), Postives = 98/177 (55.37%), Query Frame = -2
Query:  225 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLD-YLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLL 752
            Q NT  AE LY+     + L  D   IV+D + G GTIGL+ A+ VK VYG EV+  A+ DA +NA LN I+NA FV          +     KP +++ DP R G+    I+  + +   +I YVSCNPAT ARD+  Y   G         YKL  +QPVD+FP T H+ECV LL
Sbjct:  294 QVNTVMAEKLYQTAIAFSDLSKDD--IVIDAYSGIGTIGLSFAKTVKAVYGVEVIEAAVRDAQQNAALNGITNAYFVADTAEHAMATWAKDGIKPSVILVDPPRKGLTESFIQASVAMGPQKITYVSCNPATMARDIKRYQELG---------YKLAKVQPVDLFPQTHHVECVVLL 459          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1070_STRP6 (Uncharacterized RNA methyltransferase M6_Spy1070 OS=Streptococcus pyogenes serotype M6 GN=M6_Spy1070 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.497e-27
Identity = 75/177 (42.37%), Postives = 97/177 (54.80%), Query Frame = -2
Query:  225 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLD-YLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLL 752
            Q NT  AE LY+     + L  D   IV+D + G GTIGL+ A+ VK VYG EV+  A+ DA  NA LN I+NA FV          +     KP +++ DP R G+    I+  + +   +I YVSCNPAT ARD+  Y   G         YKL  +QPVD+FP T H+ECV LL
Sbjct:  294 QVNTVMAEKLYQTAIAFSDLSKDD--IVIDAYSGIGTIGLSFAKTVKAVYGVEVIEAAVRDAQHNAALNGITNAYFVADTAEHAMATWAKDGIKPSVILVDPPRKGLTESFIQASVAMGPQKITYVSCNPATMARDIKRYQELG---------YKLAKVQPVDLFPQTHHVECVVLL 459          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1024_STRP3 (Uncharacterized RNA methyltransferase SpyM3_1024/SPs0836 OS=Streptococcus pyogenes serotype M3 GN=SpyM3_1024 PE=3 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.497e-27
Identity = 75/177 (42.37%), Postives = 97/177 (54.80%), Query Frame = -2
Query:  225 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLD-YLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLL 752
            Q NT  AE LY+     + L  D   IV+D + G GTIGL+ A+ VK VYG EV+  A+ DA  NA LN I+NA FV          +     KP +++ DP R G+    I+  + +   +I YVSCNPAT ARD+  Y   G         YKL  +QPVD+FP T H+ECV LL
Sbjct:  294 QVNTVMAEKLYQTAIAFSDLSKDD--IVIDAYSGIGTIGLSFAKTVKAVYGVEVIEAAVRDAQHNAALNGITNAYFVADTAEHAMATWAKDGIKPSVILVDPPRKGLTESFIQASVAMGPQKITYVSCNPATMARDIKRYQELG---------YKLAKVQPVDLFPQTHHVECVVLL 459          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1698_LACJO (Uncharacterized RNA methyltransferase LJ_1698 OS=Lactobacillus johnsonii GN=LJ_1698 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.563e-27
Identity = 71/177 (40.11%), Postives = 98/177 (55.37%), Query Frame = -2
Query:  222 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLE 752
            Q N+ Q   LY L    A L+ D   +V+D + G GTIGL++A+ VK V G EV+  A+ DA  NAKLN I+NA +V G   ++   +     K D++  DP R G+  + I   ++    +IVY+SCNPAT  RDL        +Q     Y    + PVDMFP TPH+E V +LE
Sbjct:  280 QINSLQTPRLYDLAIQKADLKPDD--VVIDAYSGIGTIGLSVAKHVKAVRGMEVIEPAVEDANANAKLNGITNAEYVVGKAEEVMPRWAKEGLKTDVIFVDPPRKGLTPEFIDAAVETNPKKIVYISCNPATMVRDLQLF----KEQG----YDFDEIDPVDMFPQTPHVEAVAVLE 446          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y897_BACHD (Uncharacterized RNA methyltransferase BH0897 OS=Bacillus halodurans GN=BH0897 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.488e-27
Identity = 70/176 (39.77%), Postives = 99/176 (56.25%), Query Frame = -2
Query:  225 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLL 752
            Q N  Q   LY  ++  A L G   + V+D +CG GTIGL LA   + V G +V+ +AI DA  NAK   I+N  +  G   KI   +  +   PD+++ DP R G   +L+K + + K  RIVYVSCNP+T A+D++ L         +  YK+K++QPVDMFP T  +E   LL
Sbjct:  293 QLNPKQTVKLYNEVKRAAALTG--KEKVIDAYCGVGTIGLWLADQAREVRGMDVIAEAIEDAKENAKRQGITNVQYEVGKAEKIIPSWVRSSWIPDVIVVDPPRTGCDDQLLKTIKQTKPKRIVYVSCNPSTLAKDVEQL--------QRSGYKVKNIQPVDMFPWTAQVESCTLL 458          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: YFJO_BACSU (Uncharacterized RNA methyltransferase yfjO OS=Bacillus subtilis GN=yfjO PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.114e-26
Identity = 69/178 (38.76%), Postives = 98/178 (55.06%), Query Frame = -2
Query:  219 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLEL 752
            Q N  Q   LY  ++  A L G   + V+D +CG GTIG+ +A   K V G +V+ ++I DA +NAK + ++NAT+V G        +     +PD+VI DP R G     +  + K+K  R VYVSCNP+T A+DL         Q +   Y++  +QPVDMFP T H+E V  L L
Sbjct:  296 QLNPEQTVKLYDEVKKAAQLTG--KEKVVDAYCGVGTIGMWVADGAKEVRGMDVIKESIDDAKKNAKKHGMANATYVTGTAEHWLPKWTKEGFRPDVVIVDPPRTGCDSTFLDTIKKVKPKRFVYVSCNPSTLAKDL---------QTLSKDYRVDYIQPVDMFPQTAHVEAVARLVL 462          
The following BLAST results are available for this feature:
BLAST of CX069768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
Y1029_STRPN8.582e-2840.34Uncharacterized RNA methyltransferase SP_1029 OS=S... [more]
Y542_BACC11.464e-2738.64Uncharacterized RNA methyltransferase BCE_0542 OS=... [more]
Y885_CHLPN1.912e-2739.35Uncharacterized RNA methyltransferase CPn_0885/CP_... [more]
Y1360_STRP81.912e-2742.37Uncharacterized RNA methyltransferase spyM18_1360 ... [more]
Y1346_STRP11.912e-2742.37Uncharacterized RNA methyltransferase SPy_1346/M50... [more]
Y1070_STRP62.497e-2742.37Uncharacterized RNA methyltransferase M6_Spy1070 O... [more]
Y1024_STRP32.497e-2742.37Uncharacterized RNA methyltransferase SpyM3_1024/S... [more]
Y1698_LACJO5.563e-2740.11Uncharacterized RNA methyltransferase LJ_1698 OS=L... [more]
Y897_BACHD9.488e-2739.77Uncharacterized RNA methyltransferase BH0897 OS=Ba... [more]
YFJO_BACSU2.114e-2638.76Uncharacterized RNA methyltransferase yfjO OS=Baci... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12F09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12F09-L18-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069768 ID=CX069768; Name=CX069768; organism=Citrus sinensis; type=EST; length=753bp
GCTAATTAGACCGAATCAATCGAATTTCCAATTTTCAAATACTGTGTTTT
CTGCATGAATGAAGCTACAATTCAAAGAAATATAATCATGTAGCTGGAAA
TCACCCATCCAGATGTACAAATTAAAGATTACTGTCAGTTGGACCAGGAA
TAGCTTGGGCCCCTGCCAACCTAGTAGGAGTGCAGCAGCTAGCTTGGAAT
TGCAGCTTAAGGTCAAGAAAGTTCAAGTAGGCATACACATTCGATATGAG
GAGTGTGAGGGAACATATCTACTGGTTGTAAACTTTTTAGTTTATAACAT
CCCTTTATGTTTTGATCTCCCACACCATGACAAAGGTAATCAAGGTCACG
TGCACACGTGGCCGGATTACACGATACATAAACAATGCGTGGTGCCTTCA
GCTTTAGTAGGAACTTGATCAATTTCATGTGCATACCAGGGCGGTTTGGA
TCTGAAATGACAATGTCTGGCTTTGGAAAAGCATTGCCAAAATCTCCACC
AATTTTGTTGAGATCCCCTTGAACAAAAGTAGCATTAGAAATATTGTTCA
ACTTTGCATTTCTACAAGCATCTGATATAGCTTGAGGAACTACTTCATAT
CCATAAACATGTTTAACCCATCTTGCAAGTGTTAAACCAATGGTACCGGT
TCCACAAAATAGGTCAAGCACAATCTTGGAGCCATCACCTCTGAGACCAG
CACAATCTTCAATGAGTTTATAAAGAACCTCTGCCTGGTGAGTATTTGTC
TGG
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