CX069767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: TRM2_YEAST (tRNA (uracil-5-)-methyltransferase OS=Saccharomyces cerevisiae GN=TRM2 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.693e-20 Identity = 58/195 (29.74%), Postives = 98/195 (50.26%), Query Frame = 2 Query: 302 ITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDC--AGLRGDGSK--IVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 +TE + G TF SA FFQ N ++ K + D A +GD +K ++D +CG+G + ++ V V G E+ ++S A +NAK N + N F+ G K+ +++ DP R G +K L +I+Y+SCN + ARD++Y + + ++++S++ D FP T H+E V Sbjct: 443 VTEYVDGYTFNFSAGEFFQNNNSILPIVTKYVRDNLQAPAKGDDNKTKFLVDAYCGSGLFSICSSKGVDKVIGVEISADSVSFAEKNAKANGVENCRFIVGKAEKLFESIDTPSENTSVIL-DPPRKGCDELFLKQLAAYNPAKIIYISCNVHSQARDVEYF---LKETENGSAHQIESIRGFDFFPQTHHVESV 633
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_SHEON (23S rRNA (uracil-5-)-methyltransferase rumA OS=Shewanella oneidensis GN=rumA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.693e-20 Identity = 63/148 (42.57%), Postives = 83/148 (56.08%), Query Frame = 2 Query: 437 VLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNA--FPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 +LDLFCG G L LAR V G E VP+ +S A NA N +SN TF GDL+ D + K D ++ DP R G + L ++L K+K ++VYVSCNPA+ ARD L ++ YKL+ L +DMFP T HIE + Sbjct: 307 ILDLFCGMGNFSLPLARMGADVIGVEGVPEMVSQARENAVANGLSNLTFYHGDLS---ADLSSEPWMGKIDKLLLDPARAGAYESL-QWLKKMKPRQVVYVSCNPASLARDSAVL--------LERGYKLQKLGLIDMFPQTHHIEAM 442
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_PSEHT (23S rRNA (uracil-5-)-methyltransferase rumA OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=rumA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.693e-20 Identity = 70/185 (37.84%), Postives = 101/185 (54.59%), Query Frame = 2 Query: 320 GLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDL-NKIGGDFGNAFPKP-DIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 GL F+ N+F Q N + + K ++ L+GD + VLDLFCG G L LA+ K V G E V A++ A +NA N+I+NA F DL NKI + + F K D+++ DP+R G L + LK + I+YVSC+P T ARD + + ++L + ++MFPHT HIE Sbjct: 262 GLKFEFGLNNFIQVNASVNQAMLKQAQNWLALKGDEN--VLDLFCGIGNFSLVLAKQAKTVIGVEGVASAVAMATQNAHTNSITNAQFNCFDLTNKI--ETASWFNKNLDVLVLDPSRTGAITVLEQLPLK-QFKTILYVSCDPVTLARDSAIIS--------QAGFELHKIGLMNMFPHTGHIE 433
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_SHEDO (23S rRNA (uracil-5-)-methyltransferase rumA OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=rumA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.211e-20 Identity = 71/189 (37.57%), Postives = 98/189 (51.85%), Query Frame = 2 Query: 332 QISANSFFQTNTHQAEVLYKLIEDCAG-LRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEV-----VPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNA--FPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 Q + +F Q N AEV +++E L + VLDLFCG G L LA +++ G EV VP+ + A NAK NN++N +F DL+ D N K D ++ DP R G L ++L K+K ++VYVSCNPA+ ARD L + Y+LK L +DMFP T HIE + Sbjct: 288 QFTPGNFVQVN---AEVNQRMVEQAVNWLDLQVGERVLDLFCGVGNFSLALANRGQNLDGLEVIGVEGVPEMVQQARENAKRNNLANLSFYHADLS---ADLSNEKWLGKIDKLLLDPARAGAFESL-QWLQKMKPKKVVYVSCNPASLARDSSVL--------LSQGYQLKQLSMIDMFPQTHHIEAM 461
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_PHOPR (23S rRNA (uracil-5-)-methyltransferase rumA OS=Photobacterium profundum GN=rumA PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 2.211e-20 Identity = 70/186 (37.63%), Postives = 95/186 (51.08%), Query Frame = 2 Query: 314 LRGLTFQISANSFFQTNTHQAEVLYKLIEDCAG-LRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 L LT S F Q N +V K++E L S VLDLFCG G L LA+ K V G E + + + A NA N +NATF Q +L++ A + ++ DP R G +++ ++KLK R+VYVSCNPAT ARD L +K Y+L+ L +DMFP T H+E Sbjct: 273 LDDLTLHFSPKDFIQVNR---DVNKKMVEQATDWLDLQPSDRVLDLFCGLGNFSLPLAKHAKAVVGVEGIDEMVHRATENAMCNKQNNATFYQANLDEDVTKLAWAREPFNKILLDPARAGA-AGVMEHVVKLKPERVVYVSCNPATLARDSQVL--------LKKGYQLERLGMLDMFPQTGHLE 446
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_HAEI8 (23S rRNA (uracil-5-)-methyltransferase rumA OS=Haemophilus influenzae (strain 86-028NP) GN=rumA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.211e-20 Identity = 68/197 (34.52%), Postives = 93/197 (47.21%), Query Frame = 2 Query: 284 LYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 +YG + + G+ F Q N+ E + D L VLDLFCG G L LA+ VK G E V + + A +NA N I N F Q DL++ + A + ++ DP R G L L +LKA +I+YVSCNPAT RD + LC YK++ +DMFPHT H+E + Sbjct: 247 IYGDAPYYQFSDGIKLHFDIRDFIQVNSALNERMINTALDWLEL--SQQDCVLDLFCGMGNFTLPLAKRVKSAVGIEGVFEMVQKAAQNAARNQIKNIEFFQADLDQSFVEQPWANQSFNKILLDPPRSGAAFAL-NALCELKAEKILYVSCNPATLVRDAEILC--------DFGYKIEKSAVIDMFPHTGHLESI 432
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: TRM2A_MOUSE (tRNA (uracil-5-)-methyltransferase homolog A OS=Mus musculus GN=Trmt2a PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.888e-20 Identity = 89/285 (31.23%), Postives = 128/285 (44.91%), Query Frame = 2 Query: 47 SPYDVHSHSGFLKHLMLRTGSDVKTGL-----PELMVNFVTSSYKPELLRPLVE---KISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLK-APRIVYVSCNPATCARDLDYLCHGVGDQNIKGC--YKLKSLQPVDMFPHTPHIE 868 S YD +++G K L +RT S + P+ + + + K L+ +E K S V + + E + G I E L GLTF+IS ++FFQ NT AEVLY +I++ A L DG VLD+ CGTGTIGL LA VK V G E+ +A+ DA NA N+ K+I + K + R++YVSCNP + LC ++ +KG + +K++ VD+FP TPH E Sbjct: 292 SAYDPETYTGHWKQLTVRTSSRGQAMAIAYFHPQKLSSEEVAGLKASLVCHFMEGPGKASGVTSLYFVEEGQRKTPSQEGLPLEH--MAGDQCIQEDLLGLTFRISPHAFFQVNTPAAEVLYTVIQEWAQL--DGGSTVLDVCCGTGTIGLALAPKVKRVVGIELCQEAVEDARMNALTND--------------------------------------SKVILAIRKAENIKRLLYVSCNPRAAMGNFVDLCRAPSNR-VKGTPFHPVKAV-AVDLFPQTPHCE 532
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SHEAM (23S rRNA (uracil-5-)-methyltransferase rumB OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=rumB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.888e-20 Identity = 88/296 (29.73%), Postives = 129/296 (43.58%), Query Frame = 2 Query: 8 LSKITGRDPQLGLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVTSSYK--PELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLY----KLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFG---NAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 L ++T + G+ PY V G LK ++L T S V+ E M+ FV S P + R L + ++ P + + EEE L + + E G+ I SFFQTN A LY K +++ + K + DLFCG G GL A V G E+ +AI A +A + N +F D DF A P+++I +P R G+ +L + L I+Y SCNP T A+DL + Y++ +Q DMFPH+ H E Sbjct: 98 LLELTSFVRRAGIPPYRVDKAKGELKFILL-TRSAVRG---EFMLRFVLRSKDAIPRIERELPKLLADFPAIKVVSVNLQPVHMARLEGEEEIFLTQATRLDEVFNGVPLFIRPKSFFQTNPEVASRLYATAAKWVDELS------PKSLWDLFCGVGGFGLHCANESLPVTGIEIEAEAIDCAKTSAAAMGLDNLSFAALDST----DFAMGQQAQEVPEVIIVNPPRRGIGEELCERLSAFGPRAIIYSSCNPETLAKDLALI----------SGYRIARVQLFDMFPHSDHFE 369
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SHESR (23S rRNA (uracil-5-)-methyltransferase rumB OS=Shewanella sp. (strain MR-7) GN=rumB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.772e-20 Identity = 85/281 (30.25%), Postives = 124/281 (44.13%), Query Frame = 2 Query: 35 QLGLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVTSSYKP--ELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIG-GDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 Q G+ PY V G LK ++L T S V+ E M+ FV S + R L ++ P++ + EEE L + + E + I SFFQTN A LY+ + S + DLFCG G GL A + G E+ +AI+ A +A+L + F+ D GD KP+++I +P R G+ L L + I+Y SCNP T A+DL + I+G Y+L +Q D+FPH+ H E Sbjct: 114 QAGIPPYRVDKAKGELKFILL-TRSQVRG---EYMLRFVLRSRDAIARIERELPALMAEYPQIKVVSVNLQPIHMAILEGEEEIFLTENTRLEERFNDVPLFIRPKSFFQTNPQVAAKLYQTAREWVADFAPAS--LWDLFCGVGGFGLHCAAKDIPLTGIEIEAEAIACAKMSAQLMGLDKVQFMALDSTDFAKGDAAQT--KPELIIVNPPRRGIGESLCHSLSEFAPKAILYSSCNPKTLAKDLGH---------IRG-YRLTKVQLFDLFPHSDHFE 376
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SHESM (23S rRNA (uracil-5-)-methyltransferase rumB OS=Shewanella sp. (strain MR-4) GN=rumB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.772e-20 Identity = 85/281 (30.25%), Postives = 124/281 (44.13%), Query Frame = 2 Query: 35 QLGLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVTSSYKP--ELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIG-GDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 Q G+ PY V G LK ++L T S V+ E M+ FV S + R L ++ P++ + EEE L + + E + I SFFQTN A LY+ + S + DLFCG G GL A + G E+ +AI+ A +A+L + F+ D GD KP+++I +P R G+ L L + I+Y SCNP T A+DL + I+G Y+L +Q D+FPH+ H E Sbjct: 114 QAGIPPYRVDKAKGELKFILL-TRSQVRG---EYMLRFVLRSRDAIARIERELPALMAEYPQIKVVSVNLQPVHMAILEGEEEIFLTENTRLEERFNDVPLFIRPKSFFQTNPQVAAKLYQTAREWVADFAPAS--LWDLFCGVGGFGLHCAAKDIPLTGIEIEAEAIACAKMSAQLMGLDKVQFMALDSTDFAKGDAAQT--KPELIIVNPPRRGIGESLCHSLSEFAPKAILYSSCNPKTLAKDLGH---------IRG-YRLTKVQLFDLFPHSDHFE 376 The following BLAST results are available for this feature:
BLAST of CX069767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 378
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069767 ID=CX069767; Name=CX069767; organism=Citrus sinensis; type=EST; length=874bpback to top |