CX069767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_VIBSL (23S rRNA (uracil-5-)-methyltransferase rumA OS=Vibrio splendidus (strain LGP32) GN=rumA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.772e-20 Identity = 89/275 (32.36%), Postives = 121/275 (44.00%), Query Frame = 2 Query: 80 LKHLMLRTGSDVKTGLPELMVNFVTSSYKPELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLR-----------GLTFQISANSFFQTNTH-QAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 LK L+ S G EL++ L+PLVEK ++++M EE TLY + +R G+T N F Q N +++ + IE L + VLDLFCG G L +A+ V G E V + + A NA LN +SN F Q +L + A K D V+ DP R G ++ + L A R+VYVSCNPAT ARD + L K Y+L L +DMFPHT H+E Sbjct: 183 LKSLLNTFSSLTSLGHVELVLGDTGPVMVLRHLKPLVEKDEQA--LMTLMTLAK---------EEGATLYSMPETDKLVRLVGDAPSYSETGVTLPFEPNHFIQVNQKVNQQMVAQAIE---WLEPQADERVLDLFCGLGNFSLPIAQQSAFVVGVEGVDEMVQQATANAALNQLSNTEFYQANLEEDLSSQLWAKEKFDKVLLDPARAGA-SGIVDQISALGAKRVVYVSCNPATLARDSESL--------EKQGYQLAKLGMLDMFPHTSHLE 434
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_LEGPL (23S rRNA (uracil-5-)-methyltransferase rumA OS=Legionella pneumophila (strain Lens) GN=rumA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.772e-20 Identity = 69/188 (36.70%), Postives = 96/188 (51.06%), Query Frame = 2 Query: 323 LTFQISANSFFQTNTHQAEVLYKLIEDCAGLRG-DGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLN---KIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 +TFQ N F Q N AE+ K+++ L S IVLDLFCG G L +A+ V G E + A NAK N+I+N F +L+ ++ +F K V+ DP R G ++++K + + RIVYVSCNP T ARD D L + G Y L + +DMFPHT H+E + Sbjct: 265 ITFQFHPNDFTQVN---AELNRKMVKQAIQLMELKNSDIVLDLFCGLGNFSLPMAKHCSRVIGVEGNRNMVERAYMNAKSNHITNVDFYAANLDDVMEVRNLVNTSFSK---VLIDPPRSGA-LEIVKQIDSIDPERIVYVSCNPITLARDTDILVNQKG-------YVLITAGVMDMFPHTAHVESI 438
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_VIBCH (23S rRNA (uracil-5-)-methyltransferase rumB OS=Vibrio cholerae GN=rumB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.927e-20 Identity = 83/278 (29.86%), Postives = 120/278 (43.17%), Query Frame = 2 Query: 41 GLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVTSSYK--PELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 G+ PY+ G LK ++L + + M+ FV S+ + R L I++ P + I EEE L ++ E + I SFFQTN AE LY +R + DLFCG G L A V G E+ P+AI+ A R+A++ I N +F D K +A P++V+ +P R G+ +L L L I+Y SCNP T +D+ L Y++ +Q DMFPHT H E Sbjct: 109 GIPPYNKLKKKGELKFILLTRSENSG----QFMLRFVARSHAVLERIERNLPTLIAAFPMIEVISVNIQPVHMARLEGEEEIFLTETQSLLEHFNDVPMVIRPKSFFQTNPKVAEQLYATAR--TWVREIAPTQMWDLFCGVGGFALHCAAPDTAVTGIEIEPEAIASAQRSAQMMGIDNLSFAALDSAKFSQSQMSA---PELVLVNPPRRGLGSELTAQLEALAPKYILYSSCNPQTMVKDIAEL----------SSYQMIRVQWFDMFPHTDHAE 367
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SHESA (23S rRNA (uracil-5-)-methyltransferase rumB OS=Shewanella sp. (strain ANA-3) GN=rumB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.927e-20 Identity = 86/283 (30.39%), Postives = 125/283 (44.17%), Query Frame = 2 Query: 35 QLGLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVTSSYKP--ELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGN---AFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 Q G+ PY V G LK ++L T S V+ E M+ FV S + R L ++ P++ + EEE L + + E + I SFFQTN A LY+ + S + DLFCG G GL A + G E+ +AI+ A +A+L + F+ D DF A KP+++I +P R G+ L L + I+Y SCNP T A+DL + I+G Y+L +Q D+FPH+ H E Sbjct: 114 QAGIPPYRVDKAKGELKFILL-TRSQVRG---EYMLRFVLRSRDAIARIERELPTLMAEYPQIKVVSVNLQPVHMAILEGEEEIFLTENTRLEERFNDVPLFIRPKSFFQTNPQVAAKLYQTAREWVADFAPAS--LWDLFCGVGGFGLHCAAKDIPLTGIEIEAEAIACAKMSAQLMGLDKVEFMALDST----DFAKGEAAQTKPELIIVNPPRRGIGESLCHSLSEFAPKAILYSSCNPKTLAKDLGH---------IRG-YRLTKVQLFDLFPHSDHFE 376
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SHEFN (23S rRNA (uracil-5-)-methyltransferase rumB OS=Shewanella frigidimarina (strain NCIMB 400) GN=rumB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.927e-20 Identity = 80/280 (28.57%), Postives = 115/280 (41.07%), Query Frame = 2 Query: 35 QLGLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVTSSYKP--ELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 Q G+ PY V G LK ++L + M+ FV S + + R L + + PE+ + E E L + + E L + I SFFQTN A LY++ + + + DLFCG G GL A + G E+ +AI A +A + F D +A KPD++I +P R G+ L L + IVY SCNP T DL+Y+ Y++ +Q DMFPHT H E Sbjct: 107 QAGIPPYRVDKSKGELKFILLTRSQSSG----QFMLRFVLRSDQAIVRIERELPQLLQEFPEITLVSANIQPIHMAILEGEREIFLTETTRLEEQLNNVPLFIRPKSFFQTNPEVAAQLYQIAREW--VTEFKPNYIWDLFCGVGGFGLHCADSNIRLTGIEIESEAIECAILSATKLGFTQVDFSALDSTHFAKG-QSAQDKPDLIIVNPPRRGLGKSLCDSLSEFAPKAIVYSSCNPHTLMSDLEYITG----------YQITKVQMFDMFPHTDHFE 369
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_LEGPH (23S rRNA (uracil-5-)-methyltransferase rumA OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=rumA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.927e-20 Identity = 69/188 (36.70%), Postives = 95/188 (50.53%), Query Frame = 2 Query: 323 LTFQISANSFFQTNTHQAEVLYKLIEDCAGLRG-DGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLN---KIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 +TFQ N F Q N AE+ K++ L S IVLDLFCG G L +A+ V G E + A NAK N+I+N F +L+ ++ +F K V+ DP R G ++++K + + RIVYVSCNP T ARD D L + G Y L + +DMFPHT H+E + Sbjct: 265 ITFQFHPNDFTQVN---AELNRKMVTQAIQLMELKNSDIVLDLFCGLGNFSLPMAKHCSRVIGVEGNKNMVERAYMNAKSNHITNVDFYAANLDDVMEVRNLVNTSFSK---VLIDPPRSGA-LEIVKQIDSIDPERIVYVSCNPITLARDTDILVNQKG-------YVLITAGVMDMFPHTAHVESI 438
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_LEGPC (23S rRNA (uracil-5-)-methyltransferase rumA OS=Legionella pneumophila (strain Corby) GN=rumA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.927e-20 Identity = 69/188 (36.70%), Postives = 95/188 (50.53%), Query Frame = 2 Query: 323 LTFQISANSFFQTNTHQAEVLYKLIEDCAGLRG-DGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLN---KIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 +TFQ N F Q N AE+ K++ L S IVLDLFCG G L +A+ V G E + A NAK N+I+N F +L+ ++ +F K V+ DP R G ++++K + + RIVYVSCNP T ARD D L + G Y L + +DMFPHT H+E + Sbjct: 265 ITFQFHPNDFTQVN---AELNRKMVTQAIQLMELKNSDIVLDLFCGLGNFSLPMAKHCSRVIGVEGNKNMVERAYMNAKSNHITNVDFYAANLDDVMEVRNLVNTSFSK---VLIDPPRSGA-LEIVKQIDSIDPERIVYVSCNPITLARDTDILVNQKG-------YVLITAGVMDMFPHTAHVESI 438
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_LEGPA (23S rRNA (uracil-5-)-methyltransferase rumA OS=Legionella pneumophila (strain Paris) GN=rumA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.927e-20 Identity = 69/188 (36.70%), Postives = 95/188 (50.53%), Query Frame = 2 Query: 323 LTFQISANSFFQTNTHQAEVLYKLIEDCAGLRG-DGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLN---KIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 +TFQ N F Q N AE+ K++ L S IVLDLFCG G L +A+ V G E + A NAK N+I+N F +L+ ++ +F K V+ DP R G ++++K + + RIVYVSCNP T ARD D L + G Y L + +DMFPHT H+E + Sbjct: 265 ITFQFHPNDFTQVN---AELNRKMVTQAIQLMELKNSDIVLDLFCGLGNFSLPMAKHCSRVIGVEGNKNMVERAYMNAKSNHITNVDFYAANLDDVMEVRSLVNTSFSK---VLIDPPRSGA-LEIVKQIDSIDPERIVYVSCNPITLARDTDILVNQKG-------YVLITAGVMDMFPHTAHVESI 438
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_HAEIN (23S rRNA (uracil-5-)-methyltransferase rumB OS=Haemophilus influenzae GN=rumB PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.434e-20 Identity = 83/285 (29.12%), Postives = 125/285 (43.86%), Query Frame = 2 Query: 41 GLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFV--TSSYKPELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLAR-----WVKHVY--GYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 GL PY++ G LK+++L + +LM+ FV T + P + R L + + +P + I E+E L + + E G+ I FFQTN A LY + + + DLFCG G GL A+ W K + G E+ AI A +AK+ + + F D + + KPD+VI +P R G+ +L +FL +++ I+Y SCN T +DL +L CYK +Q DMFP T H E Sbjct: 115 GLVPYNIAKQKGELKYILLTESIATE----KLMLRFVLRTENKLPLIRRELPKLLEKLPHLEVISINLQPQHAAILEGEQEIFLTEQQFLPENFNGIPLFIRPRGFFQTNPKVAAGLYATAQQWVAEFPIYN--LWDLFCGVGGFGLHCAKALQEKWGKPIKLTGIEISSSAILAASHSAKILGLEHVNFQSLDAASVIENKNEN--KPDLVIVNPPRRGIGKELSEFLNQIQPHFILYSSCNAMTMGKDLQHLT----------CYKPLKIQLFDMFPQTSHYE 381
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_HAEIG (23S rRNA (uracil-5-)-methyltransferase rumB OS=Haemophilus influenzae (strain PittGG) GN=rumB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.404e-20 Identity = 83/285 (29.12%), Postives = 125/285 (43.86%), Query Frame = 2 Query: 41 GLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFV--TSSYKPELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLAR-----WVKHVY--GYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 GL PY++ G LK+++L + +LM+ FV T + P + R L + + +P + I E+E L + + E G+ I FFQTN A LY + + + DLFCG G GL A+ W K + G E+ AI A +AK+ + + F D + + KPD+VI +P R G+ +L +FL +++ I+Y SCN T +DL +L CYK +Q DMFP T H E Sbjct: 115 GLVPYNIAKQKGELKYILLTESIATE----KLMLRFVLRTENKLPLIRRELPKLLEKLPHLEVISINLQPQHAAILEGEQEIFLTEQQFLPENFNGIPLFIRPQGFFQTNPKVAAGLYASAQQWVAEFPIYN--LWDLFCGVGGFGLHCAKALQEKWGKPIKLTGIEISSSAILAASHSAKILGLEHVNFQSLDAASVIENKNEN--KPDLVIVNPPRRGIGKELSEFLNQIQPHFILYSSCNAMTMGKDLQHLT----------CYKPLKIQLFDMFPQTSHYE 381 The following BLAST results are available for this feature:
BLAST of CX069767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 378
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069767 ID=CX069767; Name=CX069767; organism=Citrus sinensis; type=EST; length=874bpback to top |