CX069767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SALA4 (23S rRNA (uracil-5-)-methyltransferase rumB OS=Salmonella agona (strain SL483) GN=rumB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.098e-19 Identity = 84/278 (30.22%), Postives = 126/278 (45.32%), Query Frame = 2 Query: 41 GLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVT-SSYKPELLRPLVEKI-SSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 GL+PY+V G LK+L+L T S G+ M+ FV S K LR + + + +P++ I E E L + + E + I SFFQTN A LY D G + + DLFCG G GL A + G E+ P+AI+ A ++A ++ F D + G PD+V+ +P R G+ L +L ++ I+Y SCN T A+D+ +L + Y+++ +Q DMFPHT H E Sbjct: 109 GLTPYNVARKRGELKYLLL-TESQFDGGM---MLRFVLRSETKLTQLRAALPWLRAQLPQLKVITANIQPVHMAIMEGETEIYLTDQQALAERFNDVPLWIRPQSFFQTNPTVASRLYATARDWVGQLP--VRHMWDLFCGVGGFGLHCATPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGET---PDLVLVNPPRRGIGKPLCDYLAQMAPRFIIYSSCNAQTMAQDIRHLPN----------YRIQRVQLFDMFPHTAHYE 367
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_VIBFM (23S rRNA (uracil-5-)-methyltransferase rumA OS=Vibrio fischeri (strain MJ11) GN=rumA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.098e-19 Identity = 68/183 (37.16%), Postives = 91/183 (49.73%), Query Frame = 2 Query: 320 GLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 G + F Q N E + + L + S VLDLFCG G L LA+ VK V G E V + A NA+ N++SN +F Q +L + D A K ++ DP R G +++ + KLK +VYVSCNPAT ARD L I+ +KL L +DMFPHT H+E Sbjct: 260 GTKIYFTPKDFIQVNRKVNEQMVEQALSWLDLNENDS--VLDLFCGLGNFSLPLAKKVKTVVGIEGVDDMVQRAKLNAERNHLSNVSFYQANLEEEASDQVWASTKFTKILLDPARAGA-AGVMETVAKLKPQTVVYVSCNPATLARDSQLL--------IQHGFKLTRLGMLDMFPHTGHLE 431
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_PHOAS (23S rRNA (uracil-5-)-methyltransferase rumA (Fragment) OS=Photobacterium angustum (strain S14 / CCUG 15956) GN=rumA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.098e-19 Identity = 70/183 (38.25%), Postives = 94/183 (51.37%), Query Frame = 2 Query: 323 LTFQISANSFFQTNTHQAEVLYKLIEDCAG-LRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 LTF S F Q N +V K++E L VLDLFCG G L LAR K V G E V + ++ A NA N + NATF Q +L++ A + D ++ DP R G +++ ++ L ++VYVSCNPAT ARD L ++ YKL L +DMFPHT H+E Sbjct: 34 LTF--SPKDFIQVNR---DVNVKMVEQAINWLDIQPQDRVLDLFCGLGNFSLPLARRAKAVVGVEGVDEMVARATANAAANGLDNATFYQANLDEDVTKLVWAQEQFDKILLDPARAGA-AGVMQHIVNLAPSKVVYVSCNPATLARDSQML--------LQQGYKLARLGMMDMFPHTGHLE 202
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_MANSM (23S rRNA (uracil-5-)-methyltransferase rumA OS=Mannheimia succiniciproducens (strain MBEL55E) GN=rumA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.098e-19 Identity = 65/202 (32.18%), Postives = 95/202 (47.03%), Query Frame = 2 Query: 269 EEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 E+ +YG+ + L Q F Q N+ + + D ++ VLDLFCG G L L+R VK G E + + A NA+ N N F + DL++ D A + ++ DP R G L L +LKA +I+YVSCNPAT RD + L + Y++K + +DMFPHT H+E + Sbjct: 243 EKTEQIYGQPPFYQLADNLQLQFDIRDFIQVNSLLNQRMITAALDWLDVQKQDH--VLDLFCGMGNFTLPLSRRVKSAVGIEGISAMVEKAKANAERNQCQNVQFYRADLDQNFADEVWATEPFNKILLDPPRTGAAFAL-NALCRLKAEKILYVSCNPATLVRDAEIL--------LNSDYRVKKVAMIDMFPHTGHLESI 433
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SALTY (23S rRNA (uracil-5-)-methyltransferase rumB OS=Salmonella typhimurium GN=rumB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.433e-19 Identity = 84/278 (30.22%), Postives = 126/278 (45.32%), Query Frame = 2 Query: 41 GLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVT-SSYKPELLRPLVEKI-SSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 GL+PY+V G LK+L+L T S G+ M+ FV S K LR + + + +P++ I E E L + + E + I SFFQTN A LY D G + + DLFCG G GL A + G E+ P+AI+ A ++A ++ F D + G PD+V+ +P R G+ L +L ++ I+Y SCN T A+D+ +L + Y+++ +Q DMFPHT H E Sbjct: 109 GLTPYNVARKRGELKYLLL-TESQFDGGM---MLRFVLRSETKLTQLRAALPWLRAQLPQLRVITANIQPVHMAIMEGETEIYLTDQQALAERFNDVPLWIRPQSFFQTNPTVASRLYATARDWVGQLP--VRHMWDLFCGVGGFGLHCATPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGET---PDLVLVNPPRRGIGKPLCDYLAQMAPRFIIYSSCNAQTMAQDIRHLPN----------YRIQRVQLFDMFPHTAHYE 367
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SALTI (23S rRNA (uracil-5-)-methyltransferase rumB OS=Salmonella typhi GN=rumB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.433e-19 Identity = 84/278 (30.22%), Postives = 126/278 (45.32%), Query Frame = 2 Query: 41 GLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVT-SSYKPELLRPLVEKI-SSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 GL+PY+V G LK+L+L T S G+ M+ FV S K LR + + + +P++ I E E L + + E + I SFFQTN A LY D G + + DLFCG G GL A + G E+ P+AI+ A ++A ++ F D + G PD+V+ +P R G+ L +L ++ I+Y SCN T A+D+ +L + Y+++ +Q DMFPHT H E Sbjct: 109 GLTPYNVARKRGELKYLLL-TESQFDGGM---MLRFVLRSETKLTQLRAALPWLRAQLPQLRVITANIQPVHMAIMEGETEIYLTDQQALAERFNDVPLWIRPQSFFQTNPTVASRLYATARDWVGQLP--VRHMWDLFCGVGGFGLHCATPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGET---PDLVLVNPPRRGIGKPLCDYLAQMAPRFIIYSSCNAQTMAQDIRHLPN----------YRIQRVQLFDMFPHTAHYE 367
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SALPK (23S rRNA (uracil-5-)-methyltransferase rumB OS=Salmonella paratyphi A (strain AKU_12601) GN=rumB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.433e-19 Identity = 84/278 (30.22%), Postives = 126/278 (45.32%), Query Frame = 2 Query: 41 GLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVT-SSYKPELLRPLVEKI-SSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 GL+PY+V G LK+L+L T S G+ M+ FV S K LR + + + +P++ I E E L + + E + I SFFQTN A LY D G + + DLFCG G GL A + G E+ P+AI+ A ++A ++ F D + G PD+V+ +P R G+ L +L ++ I+Y SCN T A+D+ +L + Y+++ +Q DMFPHT H E Sbjct: 109 GLTPYNVARKRGELKYLLL-TESQFDGGM---MLRFVLRSETKLTQLRAALPWLRAQLPQLRVITANIQPVHMAIMEGETEIYLTDQQALAERFNDVPLWIRPQSFFQTNPTVASRLYATARDWVGQLP--VRHMWDLFCGVGGFGLHCATPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGET---PDLVLVNPPRRGIGKPLCDYLAQMAPRFIIYSSCNAQTMAQDIRHLPN----------YRIQRVQLFDMFPHTAHYE 367
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SALPA (23S rRNA (uracil-5-)-methyltransferase rumB OS=Salmonella paratyphi A GN=rumB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.433e-19 Identity = 84/278 (30.22%), Postives = 126/278 (45.32%), Query Frame = 2 Query: 41 GLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVT-SSYKPELLRPLVEKI-SSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 GL+PY+V G LK+L+L T S G+ M+ FV S K LR + + + +P++ I E E L + + E + I SFFQTN A LY D G + + DLFCG G GL A + G E+ P+AI+ A ++A ++ F D + G PD+V+ +P R G+ L +L ++ I+Y SCN T A+D+ +L + Y+++ +Q DMFPHT H E Sbjct: 109 GLTPYNVARKRGELKYLLL-TESQFDGGM---MLRFVLRSETKLTQLRAALPWLRAQLPQLRVITANIQPVHMAIMEGETEIYLTDQQALAERFNDVPLWIRPQSFFQTNPTVASRLYATARDWVGQLP--VRHMWDLFCGVGGFGLHCATPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGET---PDLVLVNPPRRGIGKPLCDYLAQMAPRFIIYSSCNAQTMAQDIRHLPN----------YRIQRVQLFDMFPHTAHYE 367
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SALEP (23S rRNA (uracil-5-)-methyltransferase rumB OS=Salmonella enteritidis PT4 (strain P125109) GN=rumB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.433e-19 Identity = 84/278 (30.22%), Postives = 126/278 (45.32%), Query Frame = 2 Query: 41 GLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVT-SSYKPELLRPLVEKI-SSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 GL+PY+V G LK+L+L T S G+ M+ FV S K LR + + + +P++ I E E L + + E + I SFFQTN A LY D G + + DLFCG G GL A + G E+ P+AI+ A ++A ++ F D + G PD+V+ +P R G+ L +L ++ I+Y SCN T A+D+ +L + Y+++ +Q DMFPHT H E Sbjct: 109 GLTPYNVARKRGELKYLLL-TESQFDGGM---MLRFVLRSETKLTQLRAALPWLRAQLPQLRVITANIQPVHMAIMEGETEIYLTDQQALAERFNDVPLWIRPQSFFQTNPTVASRLYATARDWVGQLP--VRHMWDLFCGVGGFGLHCATPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGET---PDLVLVNPPRRGIGKPLCDYLAQMAPRFIIYSSCNAQTMAQDIRHLPN----------YRIQRVQLFDMFPHTAHYE 367
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SALDC (23S rRNA (uracil-5-)-methyltransferase rumB OS=Salmonella dublin (strain CT_02021853) GN=rumB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.433e-19 Identity = 84/278 (30.22%), Postives = 126/278 (45.32%), Query Frame = 2 Query: 41 GLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVT-SSYKPELLRPLVEKI-SSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 GL+PY+V G LK+L+L T S G+ M+ FV S K LR + + + +P++ I E E L + + E + I SFFQTN A LY D G + + DLFCG G GL A + G E+ P+AI+ A ++A ++ F D + G PD+V+ +P R G+ L +L ++ I+Y SCN T A+D+ +L + Y+++ +Q DMFPHT H E Sbjct: 109 GLTPYNVARKRGELKYLLL-TESQFDGGM---MLRFVLRSETKLTQLRAALPWLRAQLPQLRVITANIQPVHMAIMEGETEIYLTDQQALAERFNDVPLWIRPQSFFQTNPTVASRLYATARDWVGQLP--VRHMWDLFCGVGGFGLHCATPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGET---PDLVLVNPPRRGIGKPLCDYLAQMAPRFIIYSSCNAQTMAQDIRHLPN----------YRIQRVQLFDMFPHTAHYE 367 The following BLAST results are available for this feature:
BLAST of CX069767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 378
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069767 ID=CX069767; Name=CX069767; organism=Citrus sinensis; type=EST; length=874bpback to top |