CX069767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: Y257_AQUAE (Uncharacterized RNA methyltransferase aq_257 OS=Aquifex aeolicus GN=aq_257 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.872e-19 Identity = 69/196 (35.20%), Postives = 97/196 (49.49%), Query Frame = 2 Query: 290 GKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNK-IGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 G+ +I + +++S +SFFQ N E K + D + + K LDL CG G + L+ + G + P AI DA NAK+NN N F + K + G ++V+ DP R G+ + LLK K +IVY+SCNP T ARDL L KG Y+LK L+ +D FP T HIE + Sbjct: 238 GREHIFMDVGKWQYRVSNDSFFQVNYTLWEDFLKEVLDFS----ESYKKGLDLHCGVGFFTIPLSEQGNFIEGADANPSAIKDAEYNAKINNRDNVIFEEATAFKHLKRRIGEVI---NLVVVDPPRSGLLREERDLLLKNKPDKIVYISCNPTTFARDLKIL--------TKGGYELKRLKLIDNFPQTYHIESI 418
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SALAR (23S rRNA (uracil-5-)-methyltransferase rumB OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=rumB PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.872e-19 Identity = 84/278 (30.22%), Postives = 126/278 (45.32%), Query Frame = 2 Query: 41 GLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVT-SSYKPELLRPLVEKI-SSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 GL+PY+V G LK+L+L T S G+ M+ FV S K LR + + + +P++ I E E L + + E + I SFFQTN A LY D G + + DLFCG G GL A + G E+ P+AI+ A ++A ++ F D + G PD+V+ +P R G+ L +L ++ I+Y SCN T A+D+ +L + Y+++ +Q DMFPHT H E Sbjct: 109 GLTPYNVARKRGELKYLLL-TESQFDGGM---MLRFVLRSETKLTQLRAALPWLRAQLPQLRVITANIQPVHMAIMEGETEIYLTDQHALAERFNDVPLWIRPQSFFQTNPTVASRLYATARDWVGQLP--VRHMWDLFCGVGGFGLHCATPQMQLTGIEIAPEAIACARQSAAELGLTRLHFQALDSTQFATAQGET---PDLVLVNPPRRGIGKPLCDYLAQIAPRFIIYSSCNAQTMAQDIRHLPN----------YRIQRVQLFDMFPHTAHYE 367
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_SHESR (23S rRNA (uracil-5-)-methyltransferase rumA OS=Shewanella sp. (strain MR-7) GN=rumA PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.872e-19 Identity = 61/148 (41.22%), Postives = 82/148 (55.41%), Query Frame = 2 Query: 437 VLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNA--FPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 +LDLFCG G L LA+ V G E VP+ +S A NA N +SN TF GDL+ D K D ++ DP R G + +++L K+K ++VYVSCNPA+ ARD L ++ YKL+ L +DMFP T HIE + Sbjct: 307 ILDLFCGMGNFSLPLAKLGAEVIGVEGVPEMVSQARENAAANGLSNLTFYHGDLS---ADLSCEPWMGKIDKLLLDPARAGA-FESLQWLKKMKPRQVVYVSCNPASLARDSAVL--------LERGYKLQKLGLIDMFPQTHHIEAM 442
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_SHESA (23S rRNA (uracil-5-)-methyltransferase rumA OS=Shewanella sp. (strain ANA-3) GN=rumA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.872e-19 Identity = 61/148 (41.22%), Postives = 82/148 (55.41%), Query Frame = 2 Query: 437 VLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNA--FPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 +LDLFCG G L LA+ V G E VP+ +S A NA N +SN TF GDL+ D K D ++ DP R G + +++L K+K ++VYVSCNPA+ ARD L ++ YKL+ L +DMFP T HIE + Sbjct: 307 ILDLFCGMGNFSLPLAKLGAEVIGVEGVPEMVSQARENAAANGLSNLTFYHGDLS---ADLSCEPWMGKIDKLLLDPARAGA-FESLQWLKKMKPRQVVYVSCNPASLARDSAVL--------LERGYKLQKLGLIDMFPQTHHIEAM 442
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_KLEP3 (23S rRNA (uracil-5-)-methyltransferase rumA OS=Klebsiella pneumoniae (strain 342) GN=rumA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.872e-19 Identity = 67/186 (36.02%), Postives = 91/186 (48.92%), Query Frame = 2 Query: 311 TLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 T GL S F Q N + + + + L+ + VLDLFCG G L LA HV G E VP + NA LN +SN TF +L + A D V+ DP R G ++ ++KL R+VYVSCNPAT ARD + L ++ Y+++ L +DMFPHT H+E Sbjct: 250 TSDGLRLVFSPRDFIQVNDGVNQQMVRTALEWLDLQPEDR--VLDLFCGMGNFTLPLATRAAHVVGVEGVPALVEKGRENAALNGLSNVTFFHENLEEDVTRQAWAKHGFDKVLLDPARAGA-PGVMPHIIKLAPRRVVYVSCNPATLARDSETL--------LQAGYQIQRLAMLDMFPHTGHLE 424
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SALPC (23S rRNA (uracil-5-)-methyltransferase rumB OS=Salmonella paratyphi C (strain RKS4594) GN=rumB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.445e-19 Identity = 84/278 (30.22%), Postives = 126/278 (45.32%), Query Frame = 2 Query: 41 GLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVT-SSYKPELLRPLVEKI-SSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 GL+PY+V G LK+L+L T S G+ M+ FV S K LR + + + +P++ I E E L + + E + I SFFQTN A LY D G + + DLFCG G GL A + G E+ P+AI+ A ++A ++ F D + G PD+V+ +P R G+ L +L ++ I+Y SCN T A+D+ +L + Y+++ +Q DMFPHT H E Sbjct: 109 GLTPYNVARKRGELKYLLL-TESQFDGGM---MLRFVLRSETKLTQLRAALPWLRAQLPQLRVITANIQPVHMAIMEGETEIYLTDQQALVERFNDVPLWIRPQSFFQTNPTVASRLYATARDWVGQLP--VRHMWDLFCGVGGFGLHCATPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFAIAQGET---PDLVLVNPPRRGIGKPLCDYLAQMAPRFIIYSSCNAQTMAQDIRHLPN----------YRIQRVQLFDMFPHTAHYE 367
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SALPB (23S rRNA (uracil-5-)-methyltransferase rumB OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=rumB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.445e-19 Identity = 84/278 (30.22%), Postives = 126/278 (45.32%), Query Frame = 2 Query: 41 GLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVT-SSYKPELLRPLVEKI-SSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 GL+PY+V G LK+L+L T S G+ M+ FV S K LR + + + +P++ I E E L + + E + I SFFQTN A LY D G + + DLFCG G GL A + G E+ P+AI+ A ++A ++ F D + G PD+V+ +P R G+ L +L ++ I+Y SCN T A+D+ +L + Y+++ +Q DMFPHT H E Sbjct: 109 GLTPYNVARKRGELKYLLL-TESQFDGGM---MLRFVLRSETKLTQLRAALPWLRAQLPQLRVITANIQPVHMAIMEGETEIYLTDQQALVERFNDVPLWIRPQSFFQTNPTVASRLYATARDWVGQLP--VRHMWDLFCGVGGFGLHCATPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFAIAQGET---PDLVLVNPPRRGIGKPLCDYLAQMAPRFIIYSSCNAQTMAQDIRHLPN----------YRIQRVQLFDMFPHTAHYE 367
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SALNS (23S rRNA (uracil-5-)-methyltransferase rumB OS=Salmonella newport (strain SL254) GN=rumB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.445e-19 Identity = 84/278 (30.22%), Postives = 126/278 (45.32%), Query Frame = 2 Query: 41 GLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVT-SSYKPELLRPLVEKI-SSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 GL+PY+V G LK+L+L T S G+ M+ FV S K LR + + + +P++ I E E L + + E + I SFFQTN A LY D G + + DLFCG G GL A + G E+ P+AI+ A ++A ++ F D + G PD+V+ +P R G+ L +L ++ I+Y SCN T A+D+ +L + Y+++ +Q DMFPHT H E Sbjct: 109 GLTPYNVARKRGELKYLLL-TESQFDGGM---MLRFVLRSETKLTQLRAALPWLRAQLPQLRVITANIQPVHMAIMEGETEIYLTDQQALAERFNDVPLWIRPQSFFQTNPTVASRLYATARDWVGQLP--VRHMWDLFCGVGGFGLHCATPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFAIAQGET---PDLVLVNPPRRGIGKPLCDYLAQMAPRFIIYSSCNAQTMAQDIRHLPN----------YRIQRVQLFDMFPHTAHYE 367
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SALCH (23S rRNA (uracil-5-)-methyltransferase rumB OS=Salmonella choleraesuis GN=rumB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.445e-19 Identity = 84/278 (30.22%), Postives = 126/278 (45.32%), Query Frame = 2 Query: 41 GLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVT-SSYKPELLRPLVEKI-SSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 GL+PY+V G LK+L+L T S G+ M+ FV S K LR + + + +P++ I E E L + + E + I SFFQTN A LY D G + + DLFCG G GL A + G E+ P+AI+ A ++A ++ F D + G PD+V+ +P R G+ L +L ++ I+Y SCN T A+D+ +L + Y+++ +Q DMFPHT H E Sbjct: 109 GLTPYNVARKRGELKYLLL-TESQFDGGM---MLRFVLRSETKLTQLRAALPWLRAQLPQLRVITANIQPVHMAIMEGETEIYLTDQQALVERFNDVPLWIRPQSFFQTNPTVASRLYATARDWVGQLP--VRHMWDLFCGVGGFGLHCATPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFAIAQGET---PDLVLVNPPRRGIGKPLCDYLAQMAPRFIIYSSCNAQTMAQDIRHLPN----------YRIQRVQLFDMFPHTAHYE 367
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_ACIBY (23S rRNA (uracil-5-)-methyltransferase rumA OS=Acinetobacter baumannii (strain AYE) GN=rumA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.445e-19 Identity = 70/188 (37.23%), Postives = 92/188 (48.94%), Query Frame = 2 Query: 323 LTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVK---HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLC-HGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 + F S F Q N E + +L C L+ + VLDLFCG G L LAR V V G E + + A NAK NN+ A+F DL K A D ++ DP R G + ++++++ A RIVYVSCNPAT ARD L HG Y+LK +DMF HT H+E + Sbjct: 277 VNFAFSPLDFTQVNATVNEQMVQLA--CELLQLQQGERVLDLFCGLGNFSLPLARCVGAKGQVVGVEASEEMVQRATDNAKRNNLVQASFFSQDLTKDFSHHSWANQGFDALLIDPPRAGAY-EIMQYVPNFGAKRIVYVSCNPATLARDAGVLVQHG---------YQLKKAAVMDMFTHTEHVESI 452 The following BLAST results are available for this feature:
BLAST of CX069767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 378
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069767 ID=CX069767; Name=CX069767; organism=Citrus sinensis; type=EST; length=874bpback to top |