CX069767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: TRMA_YERPN (tRNA (uracil-5-)-methyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=trmA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13 Identity = 60/200 (30.00%), Postives = 92/200 (46.00%), Query Frame = 2 Query: 317 RGLTFQISANSFFQTNTH-QAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFV-----------QG--DLNKIGG-DFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIEC 871 R + ++ NSF Q N +L ++ G GD +L+L+CG G L LAR + V E+ +++ A N NNI N + QG + N++ G D G+ + + DP R G+ + +K L PRI+Y+SCNP T +L+ L H +K+ L D FP+T H+EC Sbjct: 177 REMIYRQVENSFTQPNAAVNIHMLEWALDVTQGATGD----LLELYCGNGNFSLALARNFERVLATEIAKPSVAAAQYNIAANNIDNVQIIRMSAEEFTQAMQGVREFNRLKGIDLGSY--NCETIFVDPPRSGLDHETVK--LVQAYPRILYISCNPETLCANLEQLQH---------THKISRLALFDQFPYTHHMEC 359
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: TRMA_YERPG (tRNA (uracil-5-)-methyltransferase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=trmA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13 Identity = 60/200 (30.00%), Postives = 92/200 (46.00%), Query Frame = 2 Query: 317 RGLTFQISANSFFQTNTH-QAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFV-----------QG--DLNKIGG-DFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIEC 871 R + ++ NSF Q N +L ++ G GD +L+L+CG G L LAR + V E+ +++ A N NNI N + QG + N++ G D G+ + + DP R G+ + +K L PRI+Y+SCNP T +L+ L H +K+ L D FP+T H+EC Sbjct: 177 REMIYRQVENSFTQPNAAVNIHMLEWALDVTQGATGD----LLELYCGNGNFSLALARNFERVLATEIAKPSVAAAQYNIAANNIDNVQIIRMSAEEFTQAMQGVREFNRLKGIDLGSY--NCETIFVDPPRSGLDHETVK--LVQAYPRILYISCNPETLCANLEQLQH---------THKISRLALFDQFPYTHHMEC 359
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: TRMA_YERPE (tRNA (uracil-5-)-methyltransferase OS=Yersinia pestis GN=trmA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13 Identity = 60/200 (30.00%), Postives = 92/200 (46.00%), Query Frame = 2 Query: 317 RGLTFQISANSFFQTNTH-QAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFV-----------QG--DLNKIGG-DFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIEC 871 R + ++ NSF Q N +L ++ G GD +L+L+CG G L LAR + V E+ +++ A N NNI N + QG + N++ G D G+ + + DP R G+ + +K L PRI+Y+SCNP T +L+ L H +K+ L D FP+T H+EC Sbjct: 177 REMIYRQVENSFTQPNAAVNIHMLEWALDVTQGATGD----LLELYCGNGNFSLALARNFERVLATEIAKPSVAAAQYNIAANNIDNVQIIRMSAEEFTQAMQGVREFNRLKGIDLGSY--NCETIFVDPPRSGLDHETVK--LVQAYPRILYISCNPETLCANLEQLQH---------THKISRLALFDQFPYTHHMEC 359
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: TRMA_YERPB (tRNA (uracil-5-)-methyltransferase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=trmA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13 Identity = 60/200 (30.00%), Postives = 92/200 (46.00%), Query Frame = 2 Query: 317 RGLTFQISANSFFQTNTH-QAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFV-----------QG--DLNKIGG-DFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIEC 871 R + ++ NSF Q N +L ++ G GD +L+L+CG G L LAR + V E+ +++ A N NNI N + QG + N++ G D G+ + + DP R G+ + +K L PRI+Y+SCNP T +L+ L H +K+ L D FP+T H+EC Sbjct: 177 REMIYRQVENSFTQPNAAVNIHMLEWALDVTQGATGD----LLELYCGNGNFSLALARNFERVLATEIAKPSVAAAQYNIAANNIDNVQIIRMSAEEFTQAMQGVREFNRLKGIDLGSY--NCETIFVDPPRSGLDHETVK--LVQAYPRILYISCNPETLCANLEQLQH---------THKISRLALFDQFPYTHHMEC 359
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: TRMA_YERPA (tRNA (uracil-5-)-methyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=trmA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13 Identity = 60/200 (30.00%), Postives = 92/200 (46.00%), Query Frame = 2 Query: 317 RGLTFQISANSFFQTNTH-QAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFV-----------QG--DLNKIGG-DFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIEC 871 R + ++ NSF Q N +L ++ G GD +L+L+CG G L LAR + V E+ +++ A N NNI N + QG + N++ G D G+ + + DP R G+ + +K L PRI+Y+SCNP T +L+ L H +K+ L D FP+T H+EC Sbjct: 177 REMIYRQVENSFTQPNAAVNIHMLEWALDVTQGATGD----LLELYCGNGNFSLALARNFERVLATEIAKPSVAAAQYNIAANNIDNVQIIRMSAEEFTQAMQGVREFNRLKGIDLGSY--NCETIFVDPPRSGLDHETVK--LVQAYPRILYISCNPETLCANLEQLQH---------THKISRLALFDQFPYTHHMEC 359
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: TRMA_YERP3 (tRNA (uracil-5-)-methyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=trmA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13 Identity = 60/200 (30.00%), Postives = 92/200 (46.00%), Query Frame = 2 Query: 317 RGLTFQISANSFFQTNTH-QAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFV-----------QG--DLNKIGG-DFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIEC 871 R + ++ NSF Q N +L ++ G GD +L+L+CG G L LAR + V E+ +++ A N NNI N + QG + N++ G D G+ + + DP R G+ + +K L PRI+Y+SCNP T +L+ L H +K+ L D FP+T H+EC Sbjct: 177 REMIYRQVENSFTQPNAAVNIHMLEWALDVTQGATGD----LLELYCGNGNFSLALARNFERVLATEIAKPSVAAAQYNIAANNIDNVQIIRMSAEEFTQAMQGVREFNRLKGIDLGSY--NCETIFVDPPRSGLDHETVK--LVQAYPRILYISCNPETLCANLEQLQH---------THKISRLALFDQFPYTHHMEC 359
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: TRMA_CAMC1 (tRNA (uracil-5-)-methyltransferase OS=Campylobacter concisus (strain 13826) GN=trmA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13 Identity = 55/193 (28.50%), Postives = 90/193 (46.63%), Query Frame = 2 Query: 329 FQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNA--FPK-PDIVISD---------PNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIEC 871 F +S N+F Q N E + ++C D +L+L+CG G + L+ K+V E+ +I++A +N +LN + N F++ D +++ F F + DI +SD P R G+ +I F+ K I+Y+SCNP T +L+ L +K+ D F +T HIEC Sbjct: 182 FSLSENAFIQPNKAVNEKMIAWAKECVQSGAD----LLELYCGHGNFTIPLSFKFKNVLATEISKSSIANALKNCELNGVENIKFLRMDADELMSAFAGVREFNRLKDIKLSDFNFSHVLVDPPRAGLSESVINFIRNFK--NIIYISCNPETLKENLNELTKS---------HKVIKFALFDQFANTHHIEC 359
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_RALEH (23S rRNA (uracil-5-)-methyltransferase rumA OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=rumA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13 Identity = 57/154 (37.01%), Postives = 76/154 (49.35%), Query Frame = 2 Query: 437 VLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNAT-FVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAP-------RIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 +LDLFCG G L LA K V G E + A NA+ N ++ T F +L ++ + A + D + DP R G + + K L +L RIVYVSC+PAT ARD L HG G Y+L V+MFPHT H+E + Sbjct: 290 LLDLFCGIGNFTLPLATQGKSVMGIEGSEALTTRALANAEYNGLAARTEFACRNLFEVTAEDIAALGRFDRWLVDPPREGA-LAVCKALGELAQQGSNVLPQRIVYVSCSPATLARDAGLLVHGAG-------YRLAGAGVVNMFPHTSHVESI 435
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: Y098_LEPIN (Uncharacterized RNA methyltransferase LA_0098 OS=Leptospira interrogans GN=LA_0098 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.420e-13 Identity = 56/188 (29.79%), Postives = 83/188 (44.15%), Query Frame = 2 Query: 314 LRGLTFQISANSFFQTNTHQ-AEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 L+ + ++I A F Q N + A L K+ E L + +L+L+CG+G I + L GYE+ + A RN LN IS+ F +L D I +P R G+ K+++ L+K +Y SCN T RDL + YKL ++ VD FP T H E + Sbjct: 234 LKRIVWEIPAGGFSQVNRYLIAPWLEKIFE----LVPNNQNRILELYCGSGLIAIALKSKTTSWLGYEISSDCVQQAKRNVLLNGISSCDFKTLNLETDWIDSEEVL-NSSFWIMNPPRAGLSKKVLQTLIKTSPNGFLYSSCNHTTLVRDLSLF--------LNKDYKLSNVTLVDFFPRTKHFEVI 408
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_RALSO (23S rRNA (uracil-5-)-methyltransferase rumA OS=Ralstonia solanacearum GN=rumA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.833e-13 Identity = 66/200 (33.00%), Postives = 87/200 (43.50%), Query Frame = 2 Query: 320 GLTFQISANSFFQTNTHQAEVLY----KLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAP----------RIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 G+T F Q N VL KL++ G R +LDLFCG G L +A V G E + A NA+ N + TF +L ++ D A + D + DP R G + + K + +L RIVYVSCNPAT ARD L H G Y+L V+MFPHT H+E + Sbjct: 259 GITMPFKPTDFTQVNHQINRVLMSRALKLLDARPGDR------LLDLFCGIGNFTLPMATRGCEVMGIEGSEALTTRALANAQHNGLDGKTTFACRNLFEVSADDIAALGRFDRWLVDPPREGA-LAVSKAVAELSQRGGEAAALLPGRIVYVSCNPATLARDAGLLVHEAG-------YRLAGAGVVNMFPHTSHVESI 444 The following BLAST results are available for this feature:
BLAST of CX069767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 378
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069767 ID=CX069767; Name=CX069767; organism=Citrus sinensis; type=EST; length=874bpback to top |