CX069767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: Y413_STRA5 (Uncharacterized RNA methyltransferase SAG0413 OS=Streptococcus agalactiae serotype V GN=SAG0413 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.283e-25 Identity = 73/248 (29.44%), Postives = 121/248 (48.79%), Query Frame = 2 Query: 131 ELMVNFVTSSYKPELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 E+ + F+TS + + ++E + PE+ ++ + ++G+ +I E + F +S +F+Q N Q ++LY ++ D ++D +CG GTIGL A VK V G +++P+AI DA NA +N + G I + + + + +I DP R G+ KL+ +LK+ ++VYVSCN +T ARDL + Y + +Q VDMFPHT E V Sbjct: 209 EVQLIFITSK-RLDFDDVVIELVREFPELKTVAVNINASKTSDIYGQITEVIWGQESINEEVLDYGFSLSPRAFYQLNPKQTQILYSEAVKALDVKEDDD--LIDAYCGVGTIGLAFAGKVKSVRGMDIIPEAIQDAKENALYMGFTNTHYEAGKAEDIIPRWYSEGFRANALIVDPPRTGLDDKLLNTILKMPPEKMVYVSCNTSTLARDL---------VTLTKVYHVHYIQSVDMFPHTARTEAV 444
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: TRM2_MOUSE (tRNA (uracil-5-)-methyltransferase homolog OS=Mus musculus GN=Trmt2b PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.283e-25 Identity = 70/203 (34.48%), Postives = 111/203 (54.68%), Query Frame = 2 Query: 284 LYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDF--GNAFPKPDIVISDPNRPGMHMKLIKFLLKLKA-PRIVYVSCNP-ATCARDLDYLC--HGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 L+G+ +I E L GL +IS ++FFQ NT AE+LY++I + +G+ + ++LD+ CGTG IGL++A+ V+G E+V QA+ DA A N ++N F G I K + + +P R G+H ++++ + + +V+VSC P R+ LC Q + + L+ PVD+FPHTPH E V Sbjct: 288 LFGEPHIFEDLLGLKIRISPDAFFQINTAGAEMLYRIIGELSGVNSES--LLLDICCGTGVIGLSVAQRASQVHGIELVEQAVEDARWTAAFNGVTNCEFHAGRAETILPQLLKSQKDEKLTVAVVNPARAGLHYRVVRAIRNCRTIHTLVFVSCKPHGESTRNFIELCCPPNSAKQLLGDPFVLREAVPVDLFPHTPHCELV 488
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: Y448_STRA3 (Uncharacterized RNA methyltransferase gbs0448 OS=Streptococcus agalactiae serotype III GN=gbs0448 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.086e-25 Identity = 72/248 (29.03%), Postives = 121/248 (48.79%), Query Frame = 2 Query: 131 ELMVNFVTSSYKPELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 E+ + F+TS + + ++E + PE+ ++ + ++G+ +I E + F +S +F+Q N Q ++LY ++ D ++D +CG GTIGL A VK V G +++P+AI DA NA +N + G + + + + + +I DP R G+ KL+ +LK+ ++VYVSCN +T ARDL + Y + +Q VDMFPHT E V Sbjct: 209 EVQLIFITSK-RLDFDDVVIELVREFPELKTVAVNINASKTSDIYGQITEVIWGQESINEEVLDYGFSLSPRAFYQLNPKQTQILYSEAVKALDVKEDDD--LIDAYCGVGTIGLAFAGKVKSVRGMDIIPEAIQDAKENALHMGFTNTHYEAGKAEDVIPRWYSEGFRANALIVDPPRTGLDDKLLNTILKMPPEKMVYVSCNTSTLARDL---------VTLTKVYHVHYIQSVDMFPHTARTEAV 444
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: Y1228_SYNPX (Uncharacterized RNA methyltransferase SYNW1228 OS=Synechococcus sp. (strain WH8102) GN=SYNW1228 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.643e-25 Identity = 92/280 (32.86%), Postives = 125/280 (44.64%), Query Frame = 2 Query: 41 GLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVTSSYKPELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKP----DIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 GLS SHS L+HL LR G TG E+++ V+S P L R + I V + L G I E GL Q+S +FFQ NT QAE + I + + + ++D +CG GTI L LA HV G E+ P +I A NA N + T Q GD N + ++ DP R G+ +I+ +L + Y+SC+ AT ARDL L +G Y+L+ LQPVD FP T H+E Sbjct: 193 GLSADHDLSHSQGLRHLGLRIGHH--TG--EVLITVVSSQQLPALQRLAQQWIERWDPVKGVTLNLQPRRTNQILGATTTVLAGAPTIRELFCGLQLQLSTTTFFQINTPQAERIVACIVSWLS-QAELAGPIVDAYCGIGTISLPLAAQGHHVVGLEINPDSIDQARSNADANGLGARTEFQ------AGDVANLLKETLATCSALVVDPPRRGLESSVIEAILSDPPGLLAYLSCDMATQARDLKRLLQP------EGPYRLEQLQPVDFFPQTTHLE 455
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: TRM2_PONAB (tRNA (uracil-5-)-methyltransferase homolog OS=Pongo abelii GN=TRMT2B PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.306e-24 Identity = 75/205 (36.59%), Postives = 112/205 (54.63%), Query Frame = 2 Query: 284 LYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPD----IVISDPNRPGMHMKLIKFLLKLKA-PRIVYVSCN-PATCARDLDYLC--HGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 L+G+ I E L L +IS ++FFQ NT AE+LY+ + + G+ D I+LD+ CGTG IGL+L++ V G E+V QA+ DA A N I+N+ F G KI G K D + + +P R G+H K+I+ + +A +V+VSC R++ LC + + + L+ + PVD+FPHTPH E V Sbjct: 281 LFGEPYIFEELLSLKIRISPDAFFQINTAGAEMLYRTVGELTGVNSD--TILLDICCGTGVIGLSLSQHTSRVLGIELVEQAVEDARWTAAFNGITNSEFHTGRAEKILP--GLLKSKEDGQSIVAVVNPARAGLHYKVIQAIRNFRAIHTLVFVSCKLHGESTRNVIELCCPPDPAKKLLGEPFVLQQVVPVDLFPHTPHCELV 481
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: TRM2_HUMAN (tRNA (uracil-5-)-methyltransferase homolog OS=Homo sapiens GN=TRMT2B PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.306e-24 Identity = 75/205 (36.59%), Postives = 111/205 (54.15%), Query Frame = 2 Query: 284 LYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPD----IVISDPNRPGMHMKLIKFLLKLKA-PRIVYVSCN-PATCARDLDYLC--HGVGDQNIKGCYKLKSLQPVDMFPHTPHIECV 874 L+G+ I E L L +IS ++FFQ NT AE+LY+ + + G+ D I+LD+ CGTG IGL+LA+ V G E++ QA+ DA A N I+N+ F G KI G K D + + +P R G+H K+I+ + +A +V+VSC R++ LC + + + L+ PVD+FPHTPH E V Sbjct: 299 LFGEPYIFEELLSLKIRISPDAFFQINTAGAEMLYRTVGELTGVNSD--TILLDICCGTGVIGLSLAQHTSRVLGIELLEQAVEDARWTAAFNGITNSEFHTGQAEKILP--GLLKSKEDGQSIVAVVNPARAGLHYKVIQAIRNFRAIHTLVFVSCKLHGESTRNVIELCCPPDPAKKLLGEPFVLQQAVPVDLFPHTPHCELV 499
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_AERHH (23S rRNA (uracil-5-)-methyltransferase rumA OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=rumA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.761e-23 Identity = 74/190 (38.95%), Postives = 102/190 (53.68%), Query Frame = 2 Query: 311 TLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAG-LRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDF-GNAFPKP--DIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 +L GL+ + F Q N A V +++E L VLDLFCG G L LAR + V G E ++ A NA+ N I+NA F + DL GGD G ++ + D+V+ DP RPG ++++ ++KL R+VYVSCNP T ARD L +KG Y+L L +DMFPHT H+E Sbjct: 258 SLDGLSLAFAPGDFIQVN---APVNQRMVEQALSWLEAGKDDKVLDLFCGIGNFTLPLARQAREVVGVEGELAMVARAEENARRNGINNARFYKADL---GGDIAGMSWAREGFDLVLLDPARPGA-FEVMEHVVKLSPRRVVYVSCNPVTLARDSQVL--------VKGGYRLVRLGMLDMFPHTGHLE 432
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: Y5020_MYCMO (Uncharacterized RNA methyltransferase MMOB5020 OS=Mycoplasma mobile GN=MMOB5020 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.218e-23 Identity = 70/198 (35.35%), Postives = 100/198 (50.51%), Query Frame = 2 Query: 275 EYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 E T K T+ + G+TF++ NSF+Q N A ++Y I + L + VLDL+ G GTI L +A K V G E +I DA N + N I N F+ D+ K F D VI DP R G+ +I+ +LKLK +I+Y+SCN T A + + H Y+++ ++ DMFP T HIE Sbjct: 171 EGTKQTKIYTTDKMNGITFRVGLNSFYQVNKEVANLIYNQISEFINLNEN----VLDLYSGIGTISLLIAAKAKSVTGVERNLDSIEDANFNKEFNKIKNVNFIHQDVIKYLKQNKTYF---DTVIVDPARRGLEEDIIELILKLKPQKIIYLSCNVGTQASNFNKFKHE---------YQIEFIKSYDMFPQTYHIE 352
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: Y965_PROMA (Uncharacterized RNA methyltransferase Pro_0965 OS=Prochlorococcus marinus GN=Pro_0965 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.385e-22 Identity = 85/272 (31.25%), Postives = 126/272 (46.32%), Query Frame = 2 Query: 74 GFLKHLMLRTGSDVKTGLPELMVNFVTSSYKPELLRPLVEKIS-SVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIV--LDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPK----PDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 G L+H+ +R+G + E+++ FV++ +LL P+ K++ S VV I+ L G+ I + + I + SFFQ N +AE K I + + +KIV +D + G GT+ + LA V G E+ +A A RNA++NNI TF D+ K PK D +I DP R G+ LI + KL I Y+SCNPAT ARDL + + Y + S+ D FP T H+E Sbjct: 159 GGLRHISIRSGINTN----EVLITFVSNFSIKKLLFPITNKLNGSESNVVGILNNIQPKPNNKIFGATTEILTGRDYIYDKFCHMDILIGSTSFFQVNLVEAE---KAINCIRNIISNTNKIVRIIDAYSGIGTMSIPLASDGYRVIGIEINNEAHEIAIRNAEINNIKTITFENQDVTKY-------LPKILLPNDFLILDPPRKGLDPSLIDVITKLMPIHICYLSCNPATLARDLSLILR-------EHKYSIISITAFDFFPQTTHLE 409
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SHEB8 (23S rRNA (uracil-5-)-methyltransferase rumB OS=Shewanella baltica (strain OS185) GN=rumB PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.363e-22 Identity = 90/292 (30.82%), Postives = 133/292 (45.55%), Query Frame = 2 Query: 8 LSKITGRDPQLGLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVTSSYK--PELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFG---NAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 L ++T Q GL PY V G LK ++L T S V+ E ++ FV S+ + R L ++ P++ + +EE L + + E + I SFFQTN A LY+ D S + DLFCG G GL A + G E+ +AI+ A +A++ + N F+ D DF +A KPD++I +P R G+ L + L + I+Y SCNP T A+DL++ I+G Y L +Q D+FPHT H E Sbjct: 111 LHRLTRFVQQAGLPPYRVDKAKGELKFILL-TRSQVRG---EYLLRFVLRSHNGIERIERELPALLAEYPQIKVVSVNIQPIHMAILEGDEEIFLTENTRLEERFNHVPLFIRPKSFFQTNPQVAAQLYQTARDWVAEFSPRS--LWDLFCGVGGFGLHCASNDITLTGIEIEAEAIACAQMSAQMMGLENVQFMALDST----DFAKGKSAADKPDLIIVNPPRRGIGEALCQSLSEFAPKAILYSSCNPKTLAKDLEH---------IQG-YHLTKVQLFDLFPHTDHFE 382 The following BLAST results are available for this feature:
BLAST of CX069767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 378
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069767 ID=CX069767; Name=CX069767; organism=Citrus sinensis; type=EST; length=874bpback to top |