CX069767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: Y1094_THEMA (Uncharacterized RNA methyltransferase TM_1094 OS=Thermotoga maritima GN=TM_1094 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.030e-22 Identity = 79/282 (28.01%), Postives = 132/282 (46.81%), Query Frame = 2 Query: 38 LGLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVTSS----YKPELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRG-DGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 L + Y+ + G LKHL++R + MV FVT + + +L+R ++++ + ++ +M TLYG+ I E FQI +FFQ+N + KLI+ + G+++VLDL+ G GT + + V E A+ NA +N+ N +V+ D+ ++ + D +I DP R G +++K + +L RIVYVSC+P+T RDL L ++ Y + ++P DMFP T H+E Sbjct: 170 LNVPVYNWETRKGVLKHLVIRYAFSTD----QFMVIFVTKTESFPWGRDLVRAVLKRFPKIHSIIHVMNSKDSVVLRGPYK----TLYGEGVIVEEFDWERFQIPPTAFFQSNY---SITSKLIDHVYREQALQGNEVVLDLYAGIGTFSVRTSFSAARVISVESSRVAVKAGKANANINSRKNIEYVEQDVLDFLKNYSG---RADRIILDPPRSGAGPEVMKEIARLSPERIVYVSCDPSTLVRDLKVL--------VENGYSIVRVKPFDMFPQTYHVE 429
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SHEON (23S rRNA (uracil-5-)-methyltransferase rumB OS=Shewanella oneidensis GN=rumB PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 4.030e-22 Identity = 88/283 (31.10%), Postives = 131/283 (46.29%), Query Frame = 2 Query: 35 QLGLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVTSSYKPELL----RPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIG-GDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 Q G+ PY + G LK+++L T S V+ E M+ FV S P+ + R L ++ P++ + +EE L + + E + I SFFQTN H A LY+ + G K + DLFCG G GL A + G E+ +AI+ A +A++ + N F+ D GD A KPD++I +P R G+ L L + I+Y SCNP T A+DL +I+G Y+L +Q D+FPH+ H E Sbjct: 114 QAGIPPYRIDKAKGELKYILL-TRSQVRG---EYMLRFVLRS--PDAIARIERELPALMAEYPQINVVSVNIQPIHMAILEGDEEIFLTENTRLEERFNDVPLFIRPKSFFQTNPHVAAKLYQTAREWVG--EFAPKSLWDLFCGVGGFGLHCASKDIPLTGIEIEAEAIACAKMSAQMMGLDNVQFMALDSTDFAKGDA--AATKPDLIIVNPPRRGIGESLCDALSEFAPRAILYSSCNPKTLAKDL---------VHIRG-YQLTRVQLFDLFPHSDHFE 376
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SHESW (23S rRNA (uracil-5-)-methyltransferase rumB OS=Shewanella sp. (strain W3-18-1) GN=rumB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.264e-22 Identity = 90/292 (30.82%), Postives = 131/292 (44.86%), Query Frame = 2 Query: 8 LSKITGRDPQLGLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVTSSYKP--ELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFG---NAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 L ++T Q G+ PY V G LK ++L T S V+ E ++ FV S+ + R L ++ P++ + +EE L + + E + I SFFQTN A LY+ + K + DLFCG G GL A + G E+ +AIS A +A L + F+ D DF NA KPD++I +P R G+ L + L + I+Y SCNP T A+DL++ I+G Y L +Q D+FPHT H E Sbjct: 110 LHRLTQFVQQAGIPPYRVDKAKGELKFILL-TRSQVRG---EYLLRFVLRSHNSIERIERALPTLLAEYPQINVVSVNIQPIHMAILEGDEEIFLTENTRLEERFNDVPLFIRPKSFFQTNPQVAAQLYQTAREWVA--EFAPKSLWDLFCGVGGFGLHCATKDIALTGIEIEAEAISCAQISANLMGLEKVQFMALDST----DFAQGKNAADKPDLIIVNPPRRGIGEALCQSLSEFAPRAILYSSCNPKTLAKDLEH---------IQG-YHLTKVQLFDLFPHTDHFE 381
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SHEB9 (23S rRNA (uracil-5-)-methyltransferase rumB OS=Shewanella baltica (strain OS195) GN=rumB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.264e-22 Identity = 89/292 (30.48%), Postives = 133/292 (45.55%), Query Frame = 2 Query: 8 LSKITGRDPQLGLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVTSSYK--PELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFG---NAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 L ++T Q GL PY V G LK ++L T S V+ E ++ FV S+ + R L ++ P++ + +EE L + + E + I SFFQTN A LY+ + S + DLFCG G GL A + G E+ +AI+ A +A++ + N F+ D DF +A KPD++I +P R G+ L + L + I+Y SCNP T A+DL++ I+G Y L +Q D+FPHT H E Sbjct: 111 LHRLTRFVQQAGLPPYRVDKAKGELKFILL-TRSQVRG---EYLLRFVLRSHNGIERIERELPALLAEYPQIKVVSVNIQPVHMAILEGDEEIFLTENTRLEERFNHVPLFIRPKSFFQTNPQVAAQLYQTAREWVAEFSPRS--LWDLFCGVGGFGLHCASKDITLTGIEIEAEAIACAQMSAQMMGLENVQFMALDST----DFAKGKSAADKPDLIIVNPPRRGIGEALCQSLSEFAPKAILYSSCNPKTLAKDLEH---------IQG-YHLTKVQLFDLFPHTDHFE 382
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SHEB2 (23S rRNA (uracil-5-)-methyltransferase rumB OS=Shewanella baltica (strain OS223) GN=rumB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.264e-22 Identity = 89/292 (30.48%), Postives = 133/292 (45.55%), Query Frame = 2 Query: 8 LSKITGRDPQLGLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVTSSYK--PELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFG---NAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 L ++T Q GL PY V G LK ++L T S V+ E ++ FV S+ + R L ++ P++ + +EE L + + E + I SFFQTN A LY+ + S + DLFCG G GL A + G E+ +AI+ A +A++ + N F+ D DF +A KPD++I +P R G+ L + L + I+Y SCNP T A+DL++ I+G Y L +Q D+FPHT H E Sbjct: 111 LHRLTRFVQQAGLPPYRVDKAKGELKFILL-TRSQVRG---EYLLRFVLRSHNGIERIERELPALLAEYPQIKVVSVNIQPVHMAILEGDEEIFLTENTRLEERFNHVPLFIRPKSFFQTNPQVAAQLYQTAREWVAEFSPRS--LWDLFCGVGGFGLHCASKDITLTGIEIEAEAIACAQMSAQMMGLENVQFMALDST----DFAKGKSAADKPDLIIVNPPRRGIGEALCQSLSEFAPKAILYSSCNPKTLAKDLEH---------IQG-YHLTKVQLFDLFPHTDHFE 382
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_AERS4 (23S rRNA (uracil-5-)-methyltransferase rumA OS=Aeromonas salmonicida (strain A449) GN=rumA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.979e-22 Identity = 73/190 (38.42%), Postives = 100/190 (52.63%), Query Frame = 2 Query: 311 TLRGLTFQISANSFFQTN--THQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKP--DIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 +L GL+ + F Q N +Q+ V L A L VLDLFCG G L LAR + V G E ++ A NA+ N I NA F + DL+ G G ++ + D+V+ DP RPG ++++ ++KL R+VYVSCNP T ARD L +KG Y+L L +DMFPHT H+E Sbjct: 258 SLDGLSLAFAPGDFIQVNGPINQSMVAQAL----AWLGASKDDKVLDLFCGIGNFTLPLARQAREVVGVEGDLAMVARAEENARRNGIDNARFYKADLS--GDIVGMSWAREGFDLVLLDPARPGA-LEVMGHVVKLSPKRVVYVSCNPVTLARDSQVL--------VKGGYRLVRLGMLDMFPHTGHLE 432
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SHEPC (23S rRNA (uracil-5-)-methyltransferase rumB OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=rumB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.173e-21 Identity = 90/292 (30.82%), Postives = 130/292 (44.52%), Query Frame = 2 Query: 8 LSKITGRDPQLGLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVTSSYKP--ELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFG---NAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 L ++T Q G+ PY V G LK ++L T S V+ E ++ FV S+ + R L ++ P++ + EE L + + E + I SFFQTN A LY+ + K + DLFCG G GL A + G E+ +AIS A +A L + F+ D DF NA KPD++I +P R G+ L + L + I+Y SCNP T A+DL++ I+G Y L +Q D+FPHT H E Sbjct: 110 LHRLTQFVQQAGIPPYRVDKAKGELKFILL-TRSQVRG---EYLLRFVLRSHNSIERIERALPTLLAEYPQINVVSVNIQPIHMAILEGGEEIFLTENTRLEERFNDVPLFIRPKSFFQTNPQVAAQLYQTAREWVA--EFAPKSLWDLFCGVGGFGLHCATKDIALTGIEIEAEAISCAQISANLMGLEKVQFMALDST----DFAQGKNAADKPDLIIVNPPRRGIGEALCQSLSEFAPKAILYSSCNPKTLAKDLEH---------IQG-YHLTKVQLFDLFPHTDHFE 381
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMA_VIBPA (23S rRNA (uracil-5-)-methyltransferase rumA OS=Vibrio parahaemolyticus GN=rumA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.173e-21 Identity = 73/184 (39.67%), Postives = 92/184 (50.00%), Query Frame = 2 Query: 320 GLTFQISANSFFQTNTHQAEVLYKLIEDCAG-LRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 G+ N+F Q N V K++E L + VLDLFCG G L +A+ KHV G E V + + A NA LN I+NA F +L + A K D V+ DP R G +I + L A R+VYVSCNPAT ARD L DQ Y+L L +DMFPHT H+E Sbjct: 260 GVKIPFDPNNFIQVNQ---AVNQKMVEQAIKWLDPQSDERVLDLFCGLGNFSLPIAKRAKHVVGVEGVAEMVEKASNNASLNQINNAQFYHANLEQDFDGQAWAAEKFDKVLLDPARAGA-SGIIDQVSALGAQRVVYVSCNPATLARDSQSLL----DQG----YQLTKLGMLDMFPHTSHLE 431
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_SHEB5 (23S rRNA (uracil-5-)-methyltransferase rumB OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=rumB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.000e-21 Identity = 88/292 (30.14%), Postives = 133/292 (45.55%), Query Frame = 2 Query: 8 LSKITGRDPQLGLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVTSSYK--PELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFG---NAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 L ++T Q GL PY V G LK ++L T S V+ E ++ FV S+ + R L ++ P++ + +EE L + + E + I SFFQTN A LY+ + S + DLFCG G GL A + G E+ +AI+ A +A++ + N F+ D DF +A KPD++I +P R G+ L + L + I+Y SCNP T A+DL++ I+G Y L +Q D+FPH+ H E Sbjct: 111 LHRLTRFVQQAGLPPYRVDKAKGELKFILL-TRSQVRG---EYLLRFVLRSHNGIERIERELPALLAEYPQIKVVSVNIQPIHMAILEGDEEIFLTENTRLEERFNHVPLFIRPKSFFQTNPQVAAQLYQTAREWVAEFSPRS--LWDLFCGVGGFGLHCASNDITLTGIEIEAEAIACAQMSAQMMGLENVQFMALDST----DFAKGKSAADKPDLIIVNPPRRGIGEALCQSLSEFAPKAILYSSCNPKTLAKDLEH---------IQG-YHLTKVQLFDLFPHSDHFE 382
BLAST of CX069767 vs. ExPASy Swiss-Prot
Match: RUMB_VIBCM (23S rRNA (uracil-5-)-methyltransferase rumB OS=Vibrio cholerae serotype O1 (strain M66-2) GN=rumB PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.612e-21 Identity = 83/278 (29.86%), Postives = 121/278 (43.53%), Query Frame = 2 Query: 41 GLSPYDVHSHSGFLKHLMLRTGSDVKTGLPELMVNFVTSSYK--PELLRPLVEKISSVPEVVSIMXXXXXXXXXXXXXEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIE 868 G+ PY+ G LK ++L + + M+ FV S+ + R L I++ P + + EEE L ++ E + I SFFQTN AE LY A +R + DLFCG G L A V G E+ P+AI+ A R+A++ I N +F D K +A P++V+ +P R G+ +L L L I+Y SCNP T +D+ L Y++ +Q DMFPHT H E Sbjct: 109 GIPPYNKLKKKGELKFILLTRSENSG----QFMLRFVARSHAVLERIERNLPTLIAAFPTIEVVSVNIQPVHMARLEGEEEIFLTETQSLLEQFNDVPMVIRPKSFFQTNPQVAEQLYATAR--AWVREIAPTQMWDLFCGVGGFALHCAAPNTAVTGIEIEPEAIASAQRSAQMMGIDNLSFAALDSAKFSQSQMSA---PELVLVNPPRRGLGSELTAQLEALAPQHILYSSCNPQTMVKDIAEL----------ASYQMSRVQWFDMFPHTDHAE 367 The following BLAST results are available for this feature:
BLAST of CX069767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 378
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069767 ID=CX069767; Name=CX069767; organism=Citrus sinensis; type=EST; length=874bpback to top |