CX069755

Overview
NameCX069755
Unique NameCX069755
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_CHOCR (ATP synthase subunit a OS=Chondrus crispus GN=ATP6 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.605e-34
Identity = 75/148 (50.68%), Postives = 97/148 (65.54%), Query Frame = -1
Query:  425 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 868
            GMIPYSFTVTSH + T GL+ SIFIGI ++G Q +G  F +                    +SY  +  +L IRLFANM +GH+L+KI++GFAWTML    +   I  L PL ++LALTGLEL +A LQAYVFT+L CIYLND +++H
Sbjct:  107 GMIPYSFTVTSHIVFTFGLALSIFIGINLIGIQTHGFKFFALFLPRGVPLAIVPLLITIEFLSYIVKVFTLSIRLFANMTSGHTLLKIIAGFAWTMLSAGGLLA-IFHLIPLALLLALTGLELAIAGLQAYVFTLLTCIYLNDVLDMH 253          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_PELUB (ATP synthase subunit a OS=Pelagibacter ubique GN=atpB PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.310e-31
Identity = 71/148 (47.97%), Postives = 94/148 (63.51%), Query Frame = -1
Query:  425 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 868
            GMIPY+FTVTSH ++T  L+  IF+G+TI+GF ++GL +L                    +ISY  R +SL +RLFANMMAGH+++K+  GF  ++         +G   PL   +ALTGLE+ VA LQAYVF IL CIYLNDA+NLH
Sbjct:  103 GMIPYAFTVTSHIIVTFILASFIFVGVTIIGFMKHGLGYLKLFVPSGVPAVLLPLIVVIEIISYLSRPVSLSVRLFANMMAGHTMMKVFGGFVISL-------GIVGGWLPLSFSVALTGLEILVAFLQAYVFAILTCIYLNDALNLH 243          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_PYLLI (ATP synthase subunit a OS=Pylaiella littoralis GN=ATP6 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.076e-30
Identity = 68/149 (45.64%), Postives = 97/149 (65.10%), Query Frame = -1
Query:  425 QGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 871
            QG++PYSFT+TSH + T+ L+ ++FIG+ I+    +G H LS                   ++SY F+ LSL +RLFANMMAGH+L+K+++  AW M+    +   I  + PL +++ L GLEL VA++QAYVFTIL CIY+NDAI LH
Sbjct:  102 QGLVPYSFTITSHLIQTMVLALTVFIGVIIIVLA-HGFHMLSLFLPGGTSIVLAFLLVPIEIVSYVFKPLSLAVRLFANMMAGHTLLKVIAAVAWAMMGSGGLL-LIAHIVPLGVLVILFGLELAVALIQAYVFTILSCIYINDAIVLH 248          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_NEUCR (ATP synthase subunit a OS=Neurospora crassa GN=atp-6 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.076e-30
Identity = 67/148 (45.27%), Postives = 96/148 (64.86%), Query Frame = -1
Query:  425 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 868
            GM+PYSF  TSHF++T  LSF+I +G TI+GFQ++GL F S                    ISY  R +SLG+RL AN+++GH L+ IL+GF + ++    IF+F+G L PL  ++A +GLELG+A +QA VF +L   Y+ DA++LH
Sbjct:  106 GMVPYSFASTSHFVVTFALSFTIVLGATILGFQKHGLEFFSLLVPAGCPLALLPLLVLIEFISYLARNISLGLRLAANILSGHMLLHILAGFTYNIMTSGIIFFFLG-LIPLAFIIAFSGLELGIAFIQAQVFVVLTSGYIKDALDLH 252          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_PODAN (ATP synthase subunit a OS=Podospora anserina GN=ATP6 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.406e-30
Identity = 67/148 (45.27%), Postives = 96/148 (64.86%), Query Frame = -1
Query:  425 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 868
            GM+PYSF  TSHF++T  LSF+I +G TI+GFQ++GL F S                    ISY  R +SLG+RL AN+++GH L+ IL+GF + ++    IF+F+G L PL  ++A +GLELG+A +QA VF +L   Y+ DA++LH
Sbjct:  118 GMVPYSFASTSHFVLTFALSFTIVLGATILGFQKHGLEFFSLLVPAGCPLGLLPLLVLIEFISYLARNISLGLRLAANILSGHMLLHILAGFTYNIMTSGIIFFFLG-LIPLAFIIAFSGLELGIAFIQAQVFVVLTSGYIKDALDLH 264          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_PENCH (ATP synthase subunit a OS=Penicillium chrysogenum GN=atp6 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.090e-30
Identity = 64/148 (43.24%), Postives = 94/148 (63.51%), Query Frame = -1
Query:  425 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 868
            G++PYSF  TSHF++T  +SF++ +G TI+GFQR+GL F S                    ISY  R +SLG+RL AN+++GH L+ ILSGF + ++    IF+ +G L PL  ++A +GLEL +A +QA VF +L C Y+ D ++LH
Sbjct:  111 GLVPYSFASTSHFILTFSISFTVVLGATILGFQRHGLKFFSLFVPSGCPLALLPLLVLIEFISYLSRNVSLGLRLAANILSGHMLLSILSGFTYNIMTSGIIFFILG-LIPLAFIIAFSGLELAIAFIQAQVFVVLACSYIKDGLDLH 257          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_COCHE (ATP synthase subunit a OS=Cochliobolus heterostrophus GN=ATP6 PE=3 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 4.090e-30
Identity = 64/148 (43.24%), Postives = 94/148 (63.51%), Query Frame = -1
Query:  425 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 868
            GM+PYSF  TSHF++T  LSF++ +G T++GF+ +GL F S                    ISY  R +SLG+RL AN+++GH L+ ILSGF + ++    IF+ +G L PL  ++A +GLELG+A +Q+ VF +L C Y+ DA+ LH
Sbjct:  111 GMVPYSFASTSHFILTFSLSFTVVLGATVLGFKEHGLKFFSLFVPAGCPLGLLPLLVLIEFISYLARNVSLGLRLAANILSGHMLLNILSGFTYNIMSSGIIFFILG-LLPLAFIIAFSGLELGIAFIQSQVFVVLSCSYIKDALELH 257          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_EMENI (ATP synthase subunit a OS=Emericella nidulans GN=atp6 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.976e-30
Identity = 64/148 (43.24%), Postives = 93/148 (62.84%), Query Frame = -1
Query:  425 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 868
            GM+PYSF  TSHF++T  +SF+I +G T +G QR+GL F S                    ISY  R +SLG+RL AN+++GH L+ ILSGF + ++    +F+F+G L PL  ++A +GLEL +A +QA VF +L C Y+ D ++LH
Sbjct:  110 GMVPYSFASTSHFILTFSMSFTIVLGATFLGLQRHGLKFFSLFVPSGCPLGLLPLLVLIEFISYLSRNVSLGLRLAANILSGHMLLSILSGFTYNIMTSGILFFFLG-LIPLAFIIAFSGLELAIAFIQAQVFVVLTCSYIKDGLDLH 256          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_RHORU (ATP synthase subunit a OS=Rhodospirillum rubrum GN=atpB PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.522e-29
Identity = 70/148 (47.30%), Postives = 89/148 (60.14%), Query Frame = -1
Query:  425 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 868
            GM+PYSFT TSH  +T  L+  IFI +TI+GF R+G H+                     LISY  R  SL +RLFANM  GH ++K+L+GF   ML +      +G + P  +VL +T LE  +A LQAYVFTIL CIYLNDAIN+H
Sbjct:  101 GMLPYSFTFTSHIAVTAALAVGIFIAVTIIGFARHGFHYFRMFFPHGAPLLTAPLLIPIELISYLSRPFSLSVRLFANMTVGHIMLKVLAGFV-IMLGV------VGGVVPFAVVLGVTVLEFFIAALQAYVFTILTCIYLNDAINMH 241          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_RHORT (ATP synthase subunit a OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=atpB PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.522e-29
Identity = 70/148 (47.30%), Postives = 89/148 (60.14%), Query Frame = -1
Query:  425 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 868
            GM+PYSFT TSH  +T  L+  IFI +TI+GF R+G H+                     LISY  R  SL +RLFANM  GH ++K+L+GF   ML +      +G + P  +VL +T LE  +A LQAYVFTIL CIYLNDAIN+H
Sbjct:  101 GMLPYSFTFTSHIAVTAALAVGIFIAVTIIGFARHGFHYFRMFFPHGAPLLTAPLLIPIELISYLSRPFSLSVRLFANMTVGHIMLKVLAGFV-IMLGV------VGGVVPFAVVLGVTVLEFFIAALQAYVFTILTCIYLNDAINMH 241          
The following BLAST results are available for this feature:
BLAST of CX069755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
ATP6_CHOCR1.605e-3450.68ATP synthase subunit a OS=Chondrus crispus GN=ATP6... [more]
ATP6_PELUB6.310e-3147.97ATP synthase subunit a OS=Pelagibacter ubique GN=a... [more]
ATP6_PYLLI1.076e-3045.64ATP synthase subunit a OS=Pylaiella littoralis GN=... [more]
ATP6_NEUCR1.076e-3045.27ATP synthase subunit a OS=Neurospora crassa GN=atp... [more]
ATP6_PODAN1.406e-3045.27ATP synthase subunit a OS=Podospora anserina GN=AT... [more]
ATP6_PENCH4.090e-3043.24ATP synthase subunit a OS=Penicillium chrysogenum ... [more]
ATP6_COCHE4.090e-3043.24ATP synthase subunit a OS=Cochliobolus heterostrop... [more]
ATP6_EMENI6.976e-3043.24ATP synthase subunit a OS=Emericella nidulans GN=a... [more]
ATP6_RHORU4.522e-2947.30ATP synthase subunit a OS=Rhodospirillum rubrum GN... [more]
ATP6_RHORT4.522e-2947.30ATP synthase subunit a OS=Rhodospirillum rubrum (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12F02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12F02-L4-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069755 ID=CX069755; Name=CX069755; organism=Citrus sinensis; type=EST; length=883bp
TGCATGCTAAGATTCAAAGCTATCCATTCATCCTGAGTTCGGATCCGGCC
ACCCCTTCGGTCGATCGGTCAACTGACAGCGGTCAGCAGATAGATCGGAA
TCGCGTTAAGAAGATCATTCGATGGTTACCGTTAGTTGGGCCTCTCTTGG
AAGAGCCTCTTCACTGCACTCAGAAGACTAACCTAACTTAGTAGCCGTGC
TGGGATGGCATCGAGCAAGCAGCGGTAGCAGGGCCGGACCTAGTGCAAAA
GCAAAGAAGCAGAAGTCGAGGCAAGAGCTATACCTTCTGGAACCGGAGCA
ATAATTGCTATAAAGGAAGCAGATGCGCAGGAACGATCCCTAAAGCAAAT
ACTCGGAATGCTCCACGACTAAGTATACCCATTCAGACTCGCTTTTGTTC
AATTATAAATAAATAACCACTTTAATGGAGATTTATAGCATCATTCAAGT
AAATACAGATTAAGATCGTAAAAACATAAGCTTGTAATATAGCTACACCT
AATTCCAGGCCGGTTAATGCAAGAACTATAAATAAAGGACCAAGATCCCC
TATGAAATAGAAAATATTATTCATACATAGCATAGTCCAAGCGAACCCAC
TTAAAATCTTTACTAAACTATGACCGGCCATCATATTAGCAAATAAACGT
ATTCCTAAGCTTAATGCGCGAAAACAATAAGAGATTAGCTCAAGGAGTAC
TAAAAAAGGCGCTAACGGCAGTGGGACTCCTGCAGGTAAGAAGAAGCTTA
AAAAATGAAGCCCATTTCTTTGAAATCCCACTATAGTAATGCCAATAAAA
ATGGAAAATGAGAGACCCAAAGTAATGAGAAAATGGCTTGTAACTGTGAA
GCTATAAGGTATCATACCCTGGNAGATTACAAA
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