CX069755

Overview
NameCX069755
Unique NameCX069755
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_YARLI (ATP synthase subunit a OS=Yarrowia lipolytica GN=ATP6 PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 9.132e-22
Identity = 57/147 (38.78%), Postives = 85/147 (57.82%), Query Frame = -1
Query:  425 MIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 865
            ++PYS+ + +  + T+GLS +I+IG T+ G   +G  F                     L+SY  RALSLG+RL +N++AGH L+ IL+G     + ++ IF F   + PL I+L +  LE  +A +QA VFTIL C Y+ DAI+LH
Sbjct:  110 LVPYSYAINAQLIWTIGLSVAIWIGCTLTGLANHGAKFFGLFLPSGTNLPLVPVLVIIELLSYIARALSLGLRLGSNILAGHLLLVILAGLILNFISIS-IFTFALGILPLSILLGIVALESAIAFIQAIVFTILTCSYIKDAIHLH 255          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_RHOCA (ATP synthase subunit a OS=Rhodobacter capsulatus GN=atpB PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.132e-22
Identity = 59/149 (39.60%), Postives = 90/149 (60.40%), Query Frame = -1
Query:  431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDL-GPLFI--VLALTGLELGVAILQAYVFTILICIYLNDAIN 868
            G+IP +FT TSH  +T  ++  +FIG+T +GF ++G HFL+                   +ISY  R +S  IRL  NMMAGH+++++ + FA  +L     F F+G +  PL +  ++A+  LE+ VA +QAYVFTIL C+YL DA++
Sbjct:   91 GLIPMAFTPTSHIAVTGVMAMGVFIGVTALGFMKHGSHFLNLFWVSAAPLPLRPILAVIEVISYFVRPVSHSIRLAGNMMAGHAVMEVFAAFAPLIL-----FSFVGVIVTPLSVLAIVAMYALEILVAFVQAYVFTILTCVYLKDALH 234          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_CANGA (ATP synthase subunit a OS=Candida glabrata GN=ATP6 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.132e-22
Identity = 61/147 (41.50%), Postives = 85/147 (57.82%), Query Frame = -1
Query:  425 MIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 865
            MIPYS+ +T+ F+  + LS  I++GITI+   ++G  F S                   L+SY  RA SLG+RL AN+ +GH L+ IL+G   T + +N IF  I    PL I+L +  LE G+AI+QAYVF+IL   YL D + LH
Sbjct:  115 MIPYSYALTAQFVFIISLSMIIWLGITILSLFKHGWVFFSLFVPSGTALPLVPLLVVIELLSYVARAFSLGLRLSANIFSGHLLMAILAGLTMTFVQIN-IFTLILGFIPLAIILIIMCLEFGIAIIQAYVFSILASSYLKDGLYLH 260          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_ORITI (ATP synthase subunit a OS=Orientia tsutsugamushi (strain Ikeda) GN=atpB PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.470e-21
Identity = 55/148 (37.16%), Postives = 85/148 (57.43%), Query Frame = -1
Query:  425 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 868
            GM+P++FT TSH ++T  L+  +F    + G  R+ L F S                   L  +  + +SL +RL ANM+AGH L+KI+   AW+++ +  +F  +    P+ +V+ L G EL ++ILQAY+FTIL C+YL D +NLH
Sbjct:  102 GMVPHAFTFTSHIIVTFSLAMIVFTTTLVYGIYRHKLGFFSLFLPKNIPLWLAPIMVIIELCVFISKPISLSLRLTANMVAGHILLKII---AWSIVSLTWLFKPL----PIALVIVLIGFELFISILQAYIFTILSCVYLRDVVNLH 242          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_BRUO2 (ATP synthase subunit a OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=atpB PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.470e-21
Identity = 54/146 (36.99%), Postives = 83/146 (56.85%), Query Frame = -1
Query:  431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868
            G+ PY +TVTS  ++T  LS  +   +   GF ++G  FL                    +IS+  R +SL +RLFANM+AGH  +K+ +GF  ++  +  +    G + PL + +A+T LE  VA LQAYVFT+L C+Y+NDA++
Sbjct:  102 GLFPYFYTVTSQIIVTFALSLLVIGTVIFYGFFKHGFGFLKLFVPSGVPGIIVPLVVLIEIISFLSRPISLSVRLFANMLAGHITLKVFAGFVVSLSSLGALGIG-GTVLPLLMTVAITALEFLVAFLQAYVFTVLTCMYINDAVH 246          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_NOVAD (ATP synthase subunit a OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=atpB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 58/144 (40.28%), Postives = 80/144 (55.56%), Query Frame = -1
Query:  425 YSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 856
            + FT TSHF +T  L+   F  +  VGF ++GLHF S                   LIS+  R  SLG+RLF  MMAGH L+++LSGF  +        +F+  +    +++ +  LEL VA +QAYVF +L C+YLNDA NLH
Sbjct:  117 HPFTATSHFTVTGVLAIMSFAIVLGVGFAKHGLHFFSLFVPHGTPVPMIPIIFPIELISFMVRPFSLGLRLFVAMMAGHVLLEVLSGFVISGTNAGVGTFFLAAVPSFLLMIGICALELLVAGIQAYVFALLTCVYLNDAENLH 260          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_BRUSU (ATP synthase subunit a OS=Brucella suis GN=atpB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 54/146 (36.99%), Postives = 83/146 (56.85%), Query Frame = -1
Query:  431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868
            G+ PY +TVTS  ++T  LS  +   +   GF ++G  FL                    +IS+  R +SL +RLFANM+AGH  +K+ +GF  ++  +  +    G + PL + +A+T LE  VA LQAYVFT+L C+Y+NDA++
Sbjct:  102 GLFPYFYTVTSQIIVTFALSLLVIGTVIFYGFFKHGFGFLKLFVPSGVPGIIVPLVVLIEIISFLSRPISLSVRLFANMLAGHITLKVFAGFVVSLSSLGALGIG-GAVLPLLMTVAITALEFLVAFLQAYVFTVLTCMYINDAVH 246          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_BRUSI (ATP synthase subunit a OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=atpB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 54/146 (36.99%), Postives = 83/146 (56.85%), Query Frame = -1
Query:  431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868
            G+ PY +TVTS  ++T  LS  +   +   GF ++G  FL                    +IS+  R +SL +RLFANM+AGH  +K+ +GF  ++  +  +    G + PL + +A+T LE  VA LQAYVFT+L C+Y+NDA++
Sbjct:  102 GLFPYFYTVTSQIIVTFALSLLVIGTVIFYGFFKHGFGFLKLFVPSGVPGIIVPLVVLIEIISFLSRPISLSVRLFANMLAGHITLKVFAGFVVSLSSLGALGIG-GAVLPLLMTVAITALEFLVAFLQAYVFTVLTCMYINDAVH 246          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_BRUME (ATP synthase subunit a OS=Brucella melitensis GN=atpB PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 54/146 (36.99%), Postives = 83/146 (56.85%), Query Frame = -1
Query:  431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868
            G+ PY +TVTS  ++T  LS  +   +   GF ++G  FL                    +IS+  R +SL +RLFANM+AGH  +K+ +GF  ++  +  +    G + PL + +A+T LE  VA LQAYVFT+L C+Y+NDA++
Sbjct:  102 GLFPYFYTVTSQIIVTFALSLLVIGTVIFYGFFKHGFGFLKLFVPSGVPGIIVPLVVLIEIISFLSRPISLSVRLFANMLAGHITLKVFAGFVVSLSSLGALGIG-GAVLPLLMTVAITALEFLVAFLQAYVFTVLTCMYINDAVH 246          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_BRUMB (ATP synthase subunit a OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=atpB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 54/146 (36.99%), Postives = 83/146 (56.85%), Query Frame = -1
Query:  431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868
            G+ PY +TVTS  ++T  LS  +   +   GF ++G  FL                    +IS+  R +SL +RLFANM+AGH  +K+ +GF  ++  +  +    G + PL + +A+T LE  VA LQAYVFT+L C+Y+NDA++
Sbjct:  102 GLFPYFYTVTSQIIVTFALSLLVIGTVIFYGFFKHGFGFLKLFVPSGVPGIIVPLVVLIEIISFLSRPISLSVRLFANMLAGHITLKVFAGFVVSLSSLGALGIG-GAVLPLLMTVAITALEFLVAFLQAYVFTVLTCMYINDAVH 246          
The following BLAST results are available for this feature:
BLAST of CX069755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
ATP6_YARLI9.132e-2238.78ATP synthase subunit a OS=Yarrowia lipolytica GN=A... [more]
ATP6_RHOCA9.132e-2239.60ATP synthase subunit a OS=Rhodobacter capsulatus G... [more]
ATP6_CANGA9.132e-2241.50ATP synthase subunit a OS=Candida glabrata GN=ATP6... [more]
ATP6_ORITI3.470e-2137.16ATP synthase subunit a OS=Orientia tsutsugamushi (... [more]
ATP6_BRUO23.470e-2136.99ATP synthase subunit a OS=Brucella ovis (strain AT... [more]
ATP6_NOVAD4.532e-2140.28ATP synthase subunit a OS=Novosphingobium aromatic... [more]
ATP6_BRUSU4.532e-2136.99ATP synthase subunit a OS=Brucella suis GN=atpB PE... [more]
ATP6_BRUSI4.532e-2136.99ATP synthase subunit a OS=Brucella suis (strain AT... [more]
ATP6_BRUME4.532e-2136.99ATP synthase subunit a OS=Brucella melitensis GN=a... [more]
ATP6_BRUMB4.532e-2136.99ATP synthase subunit a OS=Brucella melitensis biot... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12F02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12F02-L4-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069755 ID=CX069755; Name=CX069755; organism=Citrus sinensis; type=EST; length=883bp
TGCATGCTAAGATTCAAAGCTATCCATTCATCCTGAGTTCGGATCCGGCC
ACCCCTTCGGTCGATCGGTCAACTGACAGCGGTCAGCAGATAGATCGGAA
TCGCGTTAAGAAGATCATTCGATGGTTACCGTTAGTTGGGCCTCTCTTGG
AAGAGCCTCTTCACTGCACTCAGAAGACTAACCTAACTTAGTAGCCGTGC
TGGGATGGCATCGAGCAAGCAGCGGTAGCAGGGCCGGACCTAGTGCAAAA
GCAAAGAAGCAGAAGTCGAGGCAAGAGCTATACCTTCTGGAACCGGAGCA
ATAATTGCTATAAAGGAAGCAGATGCGCAGGAACGATCCCTAAAGCAAAT
ACTCGGAATGCTCCACGACTAAGTATACCCATTCAGACTCGCTTTTGTTC
AATTATAAATAAATAACCACTTTAATGGAGATTTATAGCATCATTCAAGT
AAATACAGATTAAGATCGTAAAAACATAAGCTTGTAATATAGCTACACCT
AATTCCAGGCCGGTTAATGCAAGAACTATAAATAAAGGACCAAGATCCCC
TATGAAATAGAAAATATTATTCATACATAGCATAGTCCAAGCGAACCCAC
TTAAAATCTTTACTAAACTATGACCGGCCATCATATTAGCAAATAAACGT
ATTCCTAAGCTTAATGCGCGAAAACAATAAGAGATTAGCTCAAGGAGTAC
TAAAAAAGGCGCTAACGGCAGTGGGACTCCTGCAGGTAAGAAGAAGCTTA
AAAAATGAAGCCCATTTCTTTGAAATCCCACTATAGTAATGCCAATAAAA
ATGGAAAATGAGAGACCCAAAGTAATGAGAAAATGGCTTGTAACTGTGAA
GCTATAAGGTATCATACCCTGGNAGATTACAAA
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