CX069755

Overview
NameCX069755
Unique NameCX069755
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_BRUC2 (ATP synthase subunit a OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=atpB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 54/146 (36.99%), Postives = 83/146 (56.85%), Query Frame = -1
Query:  431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868
            G+ PY +TVTS  ++T  LS  +   +   GF ++G  FL                    +IS+  R +SL +RLFANM+AGH  +K+ +GF  ++  +  +    G + PL + +A+T LE  VA LQAYVFT+L C+Y+NDA++
Sbjct:  102 GLFPYFYTVTSQIIVTFALSLLVIGTVIFYGFFKHGFGFLKLFVPSGVPGIIVPLVVLIEIISFLSRPISLSVRLFANMLAGHITLKVFAGFVVSLSSLGALGIG-GAVLPLLMTVAITALEFLVAFLQAYVFTVLTCMYINDAVH 246          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_BRUAB (ATP synthase subunit a OS=Brucella abortus GN=atpB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 54/146 (36.99%), Postives = 83/146 (56.85%), Query Frame = -1
Query:  431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868
            G+ PY +TVTS  ++T  LS  +   +   GF ++G  FL                    +IS+  R +SL +RLFANM+AGH  +K+ +GF  ++  +  +    G + PL + +A+T LE  VA LQAYVFT+L C+Y+NDA++
Sbjct:  102 GLFPYFYTVTSQIIVTFALSLLVIGTVIFYGFFKHGFGFLKLFVPSGVPGIIVPLVVLIEIISFLSRPISLSVRLFANMLAGHITLKVFAGFVVSLSSLGALGIG-GAVLPLLMTVAITALEFLVAFLQAYVFTVLTCMYINDAVH 246          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_BRUA2 (ATP synthase subunit a OS=Brucella abortus (strain 2308) GN=atpB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 54/146 (36.99%), Postives = 83/146 (56.85%), Query Frame = -1
Query:  431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868
            G+ PY +TVTS  ++T  LS  +   +   GF ++G  FL                    +IS+  R +SL +RLFANM+AGH  +K+ +GF  ++  +  +    G + PL + +A+T LE  VA LQAYVFT+L C+Y+NDA++
Sbjct:  102 GLFPYFYTVTSQIIVTFALSLLVIGTVIFYGFFKHGFGFLKLFVPSGVPGIIVPLVVLIEIISFLSRPISLSVRLFANMLAGHITLKVFAGFVVSLSSLGALGIG-GAVLPLLMTVAITALEFLVAFLQAYVFTVLTCMYINDAVH 246          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_BRUA1 (ATP synthase subunit a OS=Brucella abortus (strain S19) GN=atpB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 54/146 (36.99%), Postives = 83/146 (56.85%), Query Frame = -1
Query:  431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868
            G+ PY +TVTS  ++T  LS  +   +   GF ++G  FL                    +IS+  R +SL +RLFANM+AGH  +K+ +GF  ++  +  +    G + PL + +A+T LE  VA LQAYVFT+L C+Y+NDA++
Sbjct:  102 GLFPYFYTVTSQIIVTFALSLLVIGTVIFYGFFKHGFGFLKLFVPSGVPGIIVPLVVLIEIISFLSRPISLSVRLFANMLAGHITLKVFAGFVVSLSSLGALGIG-GAVLPLLMTVAITALEFLVAFLQAYVFTVLTCMYINDAVH 246          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_ACICJ (ATP synthase subunit a OS=Acidiphilium cryptum (strain JF-5) GN=atpB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 56/148 (37.84%), Postives = 82/148 (55.41%), Query Frame = -1
Query:  425 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 868
            G+ PY F  TSH  IT  L+  +F   T+VGF  +G+ FL                    ++S+  R +SL +RLFAN+ AGH + ++ +GF   ++        +  + PL + +ALT LE  VA LQAYVF IL C+YL+DAI++H
Sbjct:  104 GLFPYFFAFTSHIAITGALALFVFALSTLVGFWYHGIGFLKFFSPPGVPGWLLPLLIPIEIVSFLSRPISLSVRLFANITAGHVMWEVFAGFMLMLVSGLGAVGVVAAIIPLGLNIALTALEFLVAFLQAYVFAILTCLYLHDAIHMH 251          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_PARDP (ATP synthase subunit a OS=Paracoccus denitrificans (strain Pd 1222) GN=atpB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.919e-21
Identity = 56/148 (37.84%), Postives = 84/148 (56.76%), Query Frame = -1
Query:  431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIV--LALTGLELGVAILQAYVFTILICIYLNDAIN 868
            G++P SF+ TSH  +T  L+  +F G+T++GF +NG HFL                    LISY  R +S  IRL  N+MAGH+++K+ + FA            +  + P+ +V   A+ GLE+ V ++QAYVFTIL C+YL DA++
Sbjct:  109 GLLPKSFSPTSHIAVTAVLAVLVFAGVTVLGFVKNGAHFLGLFWVSSAPLALRPVLAVIELISYFVRPVSHSIRLAGNIMAGHAVIKVFAAFA-----------AVAAIAPVSVVAITAMYGLEVLVCLIQAYVFTILTCVYLKDALH 245          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_ORITB (ATP synthase subunit a OS=Orientia tsutsugamushi (strain Boryong) GN=atpB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.919e-21
Identity = 55/148 (37.16%), Postives = 84/148 (56.76%), Query Frame = -1
Query:  425 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 868
            GM+P++FT TSH ++T  L+  +F    + G  R+ L F S                   L  +  + +SL +RL ANM+AGH L+KI+   AW+++ +   F  +    P+ +V+ L G EL ++ILQAY+FTIL C+YL D +NLH
Sbjct:  102 GMVPHAFTFTSHIIVTFSLAMIVFTTTLVYGIYRHKLGFFSLFLPKNIPLWLAPIMVIIELCVFISKPISLSLRLTANMVAGHILLKII---AWSIVSLTWFFKPL----PIALVIVLIGFELFISILQAYIFTILSCVYLRDVVNLH 242          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_ANAMM (ATP synthase subunit a OS=Anaplasma marginale (strain St. Maries) GN=atpB PE=3 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 7.731e-21
Identity = 54/148 (36.49%), Postives = 81/148 (54.73%), Query Frame = -1
Query:  425 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 868
            G++P+ FT TSH  +TL LS  +   IT++GF+  GLHFL                    L +Y  R +SL IRL ANM+AGH+++ +++ F   M       + +    P   ++ L   E+ VAILQAY+FT+L  +YL+DA+  H
Sbjct:  101 GILPFGFTATSHLSVTLALSLVVCTAITVIGFRHQGLHFLRIFLPEGTPLWLAPMMVFIKLFAYVARPVSLAIRLAANMIAGHTIIAVIADFVLKM-------HLVLAPLPFAFIMGLIAFEIFVAILQAYIFTVLTTVYLSDAVAGH 241          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_YEAST (ATP synthase subunit a OS=Saccharomyces cerevisiae GN=ATP6 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.319e-20
Identity = 54/147 (36.73%), Postives = 84/147 (57.14%), Query Frame = -1
Query:  425 MIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 865
            MIPYSF +++H +  + LS  I++G TI+G  ++G  F S                    +SY  RA+SLG+RL +N++AGH L+ IL+G  +  + +N +F  +    PL ++LA+  LE  + I+Q YV+ IL   YL DA+ LH
Sbjct:  114 MIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPLLVIIETLSYFARAISLGLRLGSNILAGHLLMVILAGLTFNFMLIN-LFTLVFGFVPLAMILAIMMLEFAIGIIQGYVWAILTASYLKDAVYLH 259          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_CANAL (ATP synthase subunit a OS=Candida albicans GN=ATP6 PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.319e-20
Identity = 55/147 (37.41%), Postives = 88/147 (59.86%), Query Frame = -1
Query:  425 MIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 865
            MIPYSF +++  +  +  S +++IG  I+G   +G  F +                    +SY  RA+SLG+RL AN+++GH L+ IL G     L  ++I  FIG + P+  V+A+T LE+G+AI+QAYVF+IL+  Y+ D+++LH
Sbjct:  101 MIPYSFAISAQLVAIVSFSLALWIGNVILGLYLHGWGFFALFVPSGTPLPLVPILVLIEALSYSSRAISLGLRLGANILSGHLLMLIL-GSLIVNLMSSSILGFIGGIVPIVAVIAITILEVGIAIIQAYVFSILLSGYIKDSVSLH 246          
The following BLAST results are available for this feature:
BLAST of CX069755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
ATP6_BRUC24.532e-2136.99ATP synthase subunit a OS=Brucella canis (strain A... [more]
ATP6_BRUAB4.532e-2136.99ATP synthase subunit a OS=Brucella abortus GN=atpB... [more]
ATP6_BRUA24.532e-2136.99ATP synthase subunit a OS=Brucella abortus (strain... [more]
ATP6_BRUA14.532e-2136.99ATP synthase subunit a OS=Brucella abortus (strain... [more]
ATP6_ACICJ4.532e-2137.84ATP synthase subunit a OS=Acidiphilium cryptum (st... [more]
ATP6_PARDP5.919e-2137.84ATP synthase subunit a OS=Paracoccus denitrificans... [more]
ATP6_ORITB5.919e-2137.16ATP synthase subunit a OS=Orientia tsutsugamushi (... [more]
ATP6_ANAMM7.731e-2136.49ATP synthase subunit a OS=Anaplasma marginale (str... [more]
ATP6_YEAST1.319e-2036.73ATP synthase subunit a OS=Saccharomyces cerevisiae... [more]
ATP6_CANAL1.319e-2037.41ATP synthase subunit a OS=Candida albicans GN=ATP6... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12F02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12F02-L4-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069755 ID=CX069755; Name=CX069755; organism=Citrus sinensis; type=EST; length=883bp
TGCATGCTAAGATTCAAAGCTATCCATTCATCCTGAGTTCGGATCCGGCC
ACCCCTTCGGTCGATCGGTCAACTGACAGCGGTCAGCAGATAGATCGGAA
TCGCGTTAAGAAGATCATTCGATGGTTACCGTTAGTTGGGCCTCTCTTGG
AAGAGCCTCTTCACTGCACTCAGAAGACTAACCTAACTTAGTAGCCGTGC
TGGGATGGCATCGAGCAAGCAGCGGTAGCAGGGCCGGACCTAGTGCAAAA
GCAAAGAAGCAGAAGTCGAGGCAAGAGCTATACCTTCTGGAACCGGAGCA
ATAATTGCTATAAAGGAAGCAGATGCGCAGGAACGATCCCTAAAGCAAAT
ACTCGGAATGCTCCACGACTAAGTATACCCATTCAGACTCGCTTTTGTTC
AATTATAAATAAATAACCACTTTAATGGAGATTTATAGCATCATTCAAGT
AAATACAGATTAAGATCGTAAAAACATAAGCTTGTAATATAGCTACACCT
AATTCCAGGCCGGTTAATGCAAGAACTATAAATAAAGGACCAAGATCCCC
TATGAAATAGAAAATATTATTCATACATAGCATAGTCCAAGCGAACCCAC
TTAAAATCTTTACTAAACTATGACCGGCCATCATATTAGCAAATAAACGT
ATTCCTAAGCTTAATGCGCGAAAACAATAAGAGATTAGCTCAAGGAGTAC
TAAAAAAGGCGCTAACGGCAGTGGGACTCCTGCAGGTAAGAAGAAGCTTA
AAAAATGAAGCCCATTTCTTTGAAATCCCACTATAGTAATGCCAATAAAA
ATGGAAAATGAGAGACCCAAAGTAATGAGAAAATGGCTTGTAACTGTGAA
GCTATAAGGTATCATACCCTGGNAGATTACAAA
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