CX069755

Overview
NameCX069755
Unique NameCX069755
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_VANPO (ATP synthase subunit a OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=ATP6 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.011e-20
Identity = 52/147 (35.37%), Postives = 81/147 (55.10%), Query Frame = -1
Query:  425 MIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 865
            +IPYSF +T+  +  + LSF I++G TI GF ++G  F S                    +SY  RA SLG+RL  N++AGH L+ IL G     + +N +   +G + P  ++LA+  LE  +A++Q+YVF  L   Y+ D++ LH
Sbjct:  109 LIPYSFALTAQIVFVISLSFIIWLGSTITGFNKHGWLFFSLFVPNGTPTPLVPLLVIIESLSYIARAFSLGLRLTCNILAGHLLMVILGGLLLNFININKLTLILGII-PFAMILAILCLEFAIAMIQSYVFATLTASYIKDSLYLH 254          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_KLULA (ATP synthase subunit a OS=Kluyveromyces lactis GN=ATP6 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.011e-20
Identity = 55/147 (37.41%), Postives = 87/147 (59.18%), Query Frame = -1
Query:  425 MIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 865
            MIPYSF +++H +  + LS  I++G TI+G  ++GL F S                   L+SY  RA+SLG+RL +N+++GH L+ IL G  + ++ M +I  F+  L P   +LA+  LE  ++++QAYV++IL   YL D + LH
Sbjct:  111 MIPYSFALSAHLIFIVSLSSVIWLGATIIGLTKHGLVFFSLFVPGGTPLPLVPLLVLIELLSYFARAISLGLRLSSNVLSGHLLLIILGGLLFNLMSM-SIITFVFGLIPGVGLLAIVVLEFAISVIQAYVWSILTSSYLKDVLYLH 256          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_SPHWW (ATP synthase subunit a OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=atpB PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.545e-20
Identity = 59/154 (38.31%), Postives = 81/154 (52.60%), Query Frame = -1
Query:  425 GMIP------YSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 868
            GM+P      + FTVTSH  +T  L+   F  + +VGF R+G HF S                   L S+  R  SLG+RLF  M AGH L+K+L+GF    +    +   I  +    +++ +T LEL V  +QAYVF +L  +YLNDAINLH
Sbjct:  108 GMMPTGVVGVHPFTVTSHLTVTGVLAVISFSIVLVVGFWRHGFHFFSLFVPHGTPGYMIPMIFVIELFSFLIRPFSLGLRLFVAMTAGHILMKVLAGFVINGINAGALTVAIVSIPSFILMIGITLLELLVCAIQAYVFALLTSLYLNDAINLH 261          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_SPHAL (ATP synthase subunit a OS=Sphingopyxis alaskensis GN=atpB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.116e-19
Identity = 63/160 (39.38%), Postives = 83/160 (51.88%), Query Frame = -1
Query:  425 GMIP------YSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALT------GLELGVAILQAYVFTILICIYLNDAINLH 868
            GM+P      + FTVTSH  IT  L+   F  + +VGF R+GLHF S                    +S+  R  SLG+RLF  M AGH L+K+LSGF         ++     LG +  VL+ T       LEL VA +QAYVF +L  +Y+NDA+NLH
Sbjct:  107 GMLPLGVLGLHPFTVTSHIAITGVLALISFAIVLVVGFWRHGLHFFSLFVPHGTPLPMIPIIAPIEFVSFMVRPFSLGLRLFVAMTAGHVLLKVLSGFVINGFNAETLW-----LGSIVSVLSFTLMIGISALELLVAGIQAYVFALLTSLYINDAVNLH 261          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_GLUDA (ATP synthase subunit a OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=atpB PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.458e-19
Identity = 55/145 (37.93%), Postives = 81/145 (55.86%), Query Frame = -1
Query:  434 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAI 868
            G++P+SF  TSH  +TL L+  +F+   IV  +  G  F +                   ++S+  R +SL IRLFANM+AGH ++++ + F   ML    +F  +  +GP+ I +AL  LEL V  LQAYVF IL CIYL +A+
Sbjct:  104 GLLPFSFAFTSHIAVTLALALLVFVLAVIVSLKAQGPKFFAHFMPAGAPVALAPLLVPIEILSFLSRPVSLSIRLFANMVAGHVMLEMFAAFT-IMLAGLGLFGDVLAVGPVVINVALMALELLVGALQAYVFAILTCIYLREAV 247          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_ANAPZ (ATP synthase subunit a OS=Anaplasma phagocytophilum (strain HZ) GN=atpB PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.458e-19
Identity = 54/148 (36.49%), Postives = 82/148 (55.41%), Query Frame = -1
Query:  425 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 868
            G++P  FT TSH  +TL LS  +   +T++GF   GLHFL                    L +Y  R +SL IRL ANM+AGH+++ +++ F   +L M+ +   +    P   ++ L   E+ VAILQAY+FT+L  +YL+DA+  H
Sbjct:  102 GILPLGFTATSHVSVTLALSVVVCASVTVLGFNHQGLHFLRIFLPEGTPLWLAPMMVFIKLFAYLARPVSLAIRLAANMIAGHTIIAVIAEF---VLKMHPVLAPL----PFAFIMVLIAFEIFVAILQAYIFTVLTTVYLSDAVAGH 242          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_CANPA (ATP synthase subunit a OS=Candida parapsilosis GN=ATP6 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 4.242e-19
Identity = 49/147 (33.33%), Postives = 85/147 (57.82%), Query Frame = -1
Query:  425 MIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 865
            MIPYSF +++  +  +  S +++IG  ++G   +G  F +                    +SY  RA+SLG+RL AN+++GH L+ IL     +++  ++   F+  + P+  V+A+T LE G+AI+QAYVF+IL+  Y+ D++ LH
Sbjct:  101 MIPYSFAISAQLVAVVSFSLTLWIGNVVLGLYLHGWGFFALFVPSGTPLALVPVLVLIEALSYASRAISLGLRLGANILSGHLLMLILGSLIISLMS-SSFLGFVSGIIPILAVVAITILEFGIAIIQAYVFSILLSGYIKDSVELH 246          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_MAGSM (ATP synthase subunit a OS=Magnetococcus sp. (strain MC-1) GN=atpB PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.540e-19
Identity = 54/148 (36.49%), Postives = 79/148 (53.38%), Query Frame = -1
Query:  425 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 868
            G+IP SFT TS  ++T  L+ S+F   T +   ++G  F+                    ++SY  R +SL +RLFANM AGH+++ I+  FA T+          G L P       TG EL +  +QAY+FTIL C+Y+NDA++LH
Sbjct:  119 GLIPGSFTPTSQLVVTATLALSVFFFATGLAIVKHGTGFIGFFVPSGVPPMLLILMVPIEIVSYLSRPVSLSVRLFANMTAGHTVLAIMFFFAATLPLG-------GLLMPAAFATVFTGFELFIGFIQAYIFTILTCVYINDALHLH 259          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_ERYLH (ATP synthase subunit a OS=Erythrobacter litoralis (strain HTCC2594) GN=atpB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.690e-18
Identity = 55/144 (38.19%), Postives = 76/144 (52.78%), Query Frame = -1
Query:  425 YSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 856
            + FT TSHF IT  L+   F  + IVGF ++G HF S                   LIS+  R  SL +RLF  MMAGH L+K+LS F    +     F  +       +++ ++ LE+ VA +QAYVF +L  +Y+NDA NLH
Sbjct:  119 HPFTFTSHFTITGVLAIISFSIVLIVGFWKHGFHFFSLFVPSGTPLPMIPIIFPIELISFLVRPFSLALRLFVAMMAGHVLLKVLSSFVIDGINAGAGFGLLVGAPSFILMIGISALEILVAGIQAYVFALLTSLYINDAENLH 262          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_DEBHA (ATP synthase subunit a OS=Debaryomyces hansenii GN=ATP6 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.773e-17
Identity = 45/147 (30.61%), Postives = 82/147 (55.78%), Query Frame = -1
Query:  425 MIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 865
            M+PYSF +++  +  +  S S++ G  ++G  ++G  F +                    +SY  RA+SLG+RL AN+++GH L+ IL    + ++  +++  F+G   P+  V+A+   E  + ++QAYVFTIL+  Y+ D++ LH
Sbjct:  101 MMPYSFAMSAQLVAIVSFSLSLWFGCVLMGLSKHGWGFFALFVPGGTPLALVPVLVLIETLSYSSRAISLGLRLSANVLSGHLLMLILGTLMFNLMG-SSMLGFMGGFMPVMGVIAIVVTEFAIGMMQAYVFTILLSSYIKDSVYLH 246          
The following BLAST results are available for this feature:
BLAST of CX069755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
ATP6_VANPO5.011e-2035.37ATP synthase subunit a OS=Vanderwaltozyma polyspor... [more]
ATP6_KLULA5.011e-2037.41ATP synthase subunit a OS=Kluyveromyces lactis GN=... [more]
ATP6_SPHWW6.545e-2038.31ATP synthase subunit a OS=Sphingomonas wittichii (... [more]
ATP6_SPHAL1.116e-1939.38ATP synthase subunit a OS=Sphingopyxis alaskensis ... [more]
ATP6_GLUDA1.458e-1937.93ATP synthase subunit a OS=Gluconacetobacter diazot... [more]
ATP6_ANAPZ1.458e-1936.49ATP synthase subunit a OS=Anaplasma phagocytophilu... [more]
ATP6_CANPA4.242e-1933.33ATP synthase subunit a OS=Candida parapsilosis GN=... [more]
ATP6_MAGSM5.540e-1936.49ATP synthase subunit a OS=Magnetococcus sp. (strai... [more]
ATP6_ERYLH4.690e-1838.19ATP synthase subunit a OS=Erythrobacter litoralis ... [more]
ATP6_DEBHA6.773e-1730.61ATP synthase subunit a OS=Debaryomyces hansenii GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12F02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12F02-L4-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069755 ID=CX069755; Name=CX069755; organism=Citrus sinensis; type=EST; length=883bp
TGCATGCTAAGATTCAAAGCTATCCATTCATCCTGAGTTCGGATCCGGCC
ACCCCTTCGGTCGATCGGTCAACTGACAGCGGTCAGCAGATAGATCGGAA
TCGCGTTAAGAAGATCATTCGATGGTTACCGTTAGTTGGGCCTCTCTTGG
AAGAGCCTCTTCACTGCACTCAGAAGACTAACCTAACTTAGTAGCCGTGC
TGGGATGGCATCGAGCAAGCAGCGGTAGCAGGGCCGGACCTAGTGCAAAA
GCAAAGAAGCAGAAGTCGAGGCAAGAGCTATACCTTCTGGAACCGGAGCA
ATAATTGCTATAAAGGAAGCAGATGCGCAGGAACGATCCCTAAAGCAAAT
ACTCGGAATGCTCCACGACTAAGTATACCCATTCAGACTCGCTTTTGTTC
AATTATAAATAAATAACCACTTTAATGGAGATTTATAGCATCATTCAAGT
AAATACAGATTAAGATCGTAAAAACATAAGCTTGTAATATAGCTACACCT
AATTCCAGGCCGGTTAATGCAAGAACTATAAATAAAGGACCAAGATCCCC
TATGAAATAGAAAATATTATTCATACATAGCATAGTCCAAGCGAACCCAC
TTAAAATCTTTACTAAACTATGACCGGCCATCATATTAGCAAATAAACGT
ATTCCTAAGCTTAATGCGCGAAAACAATAAGAGATTAGCTCAAGGAGTAC
TAAAAAAGGCGCTAACGGCAGTGGGACTCCTGCAGGTAAGAAGAAGCTTA
AAAAATGAAGCCCATTTCTTTGAAATCCCACTATAGTAATGCCAATAAAA
ATGGAAAATGAGAGACCCAAAGTAATGAGAAAATGGCTTGTAACTGTGAA
GCTATAAGGTATCATACCCTGGNAGATTACAAA
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