CX069755

Overview
NameCX069755
Unique NameCX069755
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_PONAB (ATP synthase subunit a OS=Pongo abelii GN=MT-ATP6 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 43/143 (30.07%), Postives = 71/143 (49.65%), Query Frame = -1
Query:  440 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLND 868
            G++PYSFT T+   + L ++  ++     +G +      L+                    +S   + L+L +RL AN+ AGH L+ ++   A  ML +N     I     L I+  LT LE  +A++QAYVFT+L+ +YL+D
Sbjct:   86 GLLPYSFTPTTQLSMNLAMAIPLWASTVAMGLRFKAKITLTHLLPQGTPTPLIPMLIIIETVSLFIQPLALAVRLTANITAGHLLMHLIGSSALAMLAINLPLTLI----TLTILTLLTILETAIALIQAYVFTLLVSLYLHD 224          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_PAPHA (ATP synthase subunit a OS=Papio hamadryas GN=MT-ATP6 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 44/143 (30.77%), Postives = 77/143 (53.85%), Query Frame = -1
Query:  440 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLND 868
            G++P+SFT T+   + L ++  ++ G  I G +    +FL+                    IS   + ++L +RL AN+ AGH L+ ++     TML ++ I      L  + ++L LT LE+ VA++QAYVFT+L+ +YL++
Sbjct:   86 GLLPHSFTPTTQLSMNLAMAIPLWAGTIITGLRFKTKNFLAHMLPQGTPTPLIPMLVMIETISLLIQPMALAVRLTANITAGHLLMHLIGN---TMLTLSTINLSTTLLTSVLLML-LTILEIAVALIQAYVFTLLVNLYLHN 224          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_CRIGR (ATP synthase subunit a OS=Cricetulus griseus GN=MT-ATP6 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 42/143 (29.37%), Postives = 73/143 (51.05%), Query Frame = -1
Query:  440 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLND 868
            G++P++FT T+   + LG++   + G  I+GF+      L+                    IS   + ++L +RL AN+ AGH L+ ++ G    +  ++     I       I++ LT LE  VA++QAYVFT+L+ +YL+D
Sbjct:   86 GLLPHTFTPTTQLSMNLGMAIPPWAGAVILGFRHKMKDSLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTSISLPTAMI----TFIILIMLTILEFAVALIQAYVFTLLVSLYLHD 224          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_ANAPL (ATP synthase subunit a OS=Anas platyrhynchos GN=MT-ATP6 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 43/145 (29.66%), Postives = 76/145 (52.41%), Query Frame = -1
Query:  434 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAI 868
            G++PY+FT T+   + + L+F +++   + G +      L+                     S   R L+LG+RL AN+ AGH L++++S  +   + +  I   +  L  + I+L LT LE+ VA++QAYVF +L+ +YL + I
Sbjct:   87 GLLPYTFTPTTQLSMNMALAFPLWLATLLTGLRNKPSASLAHLLPEGTPTPLIPALILIETTSLLIRPLALGVRLTANLTAGHLLIQLISTAS---IALKPILPTVSIL-TMAILLLLTILEVAVAMIQAYVFVLLLSLYLQENI 227          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_MOUSE (ATP synthase subunit a OS=Mus musculus GN=Mtatp6 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 42/143 (29.37%), Postives = 73/143 (51.05%), Query Frame = -1
Query:  440 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLND 868
            G++P++FT T+   + L ++  ++ G  I GF+      L+                    IS   + ++L +RL AN+ AGH L+ ++ G    ++ ++     I       I+L LT LE  VA++QAYVFT+L+ +YL+D
Sbjct:   86 GLLPHTFTPTTQLSMNLSMAIPLWAGAVITGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMNISPPTATI----TFIILLLLTILEFAVALIQAYVFTLLVSLYLHD 224          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_CARAU (ATP synthase subunit a OS=Carassius auratus GN=mt-atp6 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 39/145 (26.90%), Postives = 73/145 (50.34%), Query Frame = -1
Query:  434 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAI 868
            G++PY+FT T+   + +G +  +++   I+G +      L                     IS   R L+LG+RL AN+ AGH L+++++   + ++ M      +       ++  LT LE+ VA++QAYVF +L+ +YL + +
Sbjct:   87 GLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTVALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLMPMMPTVAIL----TATVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_BALPH (ATP synthase subunit a OS=Balaenoptera physalus GN=MT-ATP6 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 44/144 (30.56%), Postives = 73/144 (50.69%), Query Frame = -1
Query:  440 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLAL-TGLELGVAILQAYVFTILICIYLND 868
            GM+P+SFT T+   + +G++  ++ G    GF+      L+                    IS   + ++  +RL AN+ AGH L+ ++      ++ +N    FI      F +LAL T LE  VA++QAYVFT+L+ +YL+D
Sbjct:   86 GMLPHSFTPTTQLSMNVGMAIPLWAGTVTTGFRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPVAWAVRLTANITAGHLLMHLIGETTLALMNINLFSAFI-----TFTILALLTILEFAVALIQAYVFTLLVSLYLHD 224          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_STRCA (ATP synthase subunit a OS=Struthio camelus GN=MT-ATP6 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.909e-11
Identity = 44/146 (30.14%), Postives = 72/146 (49.32%), Query Frame = -1
Query:  434 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTML-CMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAI 868
            G++PY+FT T+   + + L+F +++   + G +      L                      S   R L+LG+RL AN+ AGH L++++S     +L  M  I           ++L LT LEL VA++QAYVF +L+ +YL + I
Sbjct:   87 GLLPYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPSISLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVRLTANLTAGHLLIQLISTATLALLPTMPTISVLTAT-----VLLLLTILELAVAMIQAYVFVLLLSLYLQENI 227          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_SCYCA (ATP synthase subunit a OS=Scyliorhinus canicula GN=MT-ATP6 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.909e-11
Identity = 40/145 (27.59%), Postives = 73/145 (50.34%), Query Frame = -1
Query:  434 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAI 868
            G++PY+FT T+   + +  +  +++   ++G        L                     IS   R L+LG+RL AN+ AGH L+++++  A+ +L M      +  L    ++  LT LE+ VA++QAYVF +L+ +YL + +
Sbjct:   87 GLLPYTFTPTTQLSLNMAFALPLWLTTVLIGMFNQPTIALGHLLPEGTPTPLVPVLIIIETISLFIRPLALGVRLTANLTAGHLLMQLIATAAFVLLTMMPTVALLTSL----VLFLLTILEVAVAMIQAYVFVLLLSLYLQENV 227          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_LEMCA (ATP synthase subunit a OS=Lemur catta GN=MT-ATP6 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.909e-11
Identity = 44/144 (30.56%), Postives = 73/144 (50.69%), Query Frame = -1
Query:  440 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLAL-TGLELGVAILQAYVFTILICIYLND 868
            G++P+SFT T+   + LG++  ++    I GF+      L+                    IS   + ++L +RL AN+ AGH L+ ++ G    +  ++     I      FI+L L T LE  VA++QAYVFT+L+ +YL+D
Sbjct:   86 GLLPHSFTPTTQLSMNLGMAIPLWAATVIKGFRHKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTSISPATASI-----TFIILTLLTILEFAVALIQAYVFTLLVSLYLHD 224          
The following BLAST results are available for this feature:
BLAST of CX069755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
ATP6_PONAB1.119e-1130.07ATP synthase subunit a OS=Pongo abelii GN=MT-ATP6 ... [more]
ATP6_PAPHA1.119e-1130.77ATP synthase subunit a OS=Papio hamadryas GN=MT-AT... [more]
ATP6_CRIGR1.119e-1129.37ATP synthase subunit a OS=Cricetulus griseus GN=MT... [more]
ATP6_ANAPL1.119e-1129.66ATP synthase subunit a OS=Anas platyrhynchos GN=MT... [more]
ATP6_MOUSE1.461e-1129.37ATP synthase subunit a OS=Mus musculus GN=Mtatp6 P... [more]
ATP6_CARAU1.461e-1126.90ATP synthase subunit a OS=Carassius auratus GN=mt-... [more]
ATP6_BALPH1.461e-1130.56ATP synthase subunit a OS=Balaenoptera physalus GN... [more]
ATP6_STRCA1.909e-1130.14ATP synthase subunit a OS=Struthio camelus GN=MT-A... [more]
ATP6_SCYCA1.909e-1127.59ATP synthase subunit a OS=Scyliorhinus canicula GN... [more]
ATP6_LEMCA1.909e-1130.56ATP synthase subunit a OS=Lemur catta GN=MT-ATP6 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12F02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12F02-L4-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069755 ID=CX069755; Name=CX069755; organism=Citrus sinensis; type=EST; length=883bp
TGCATGCTAAGATTCAAAGCTATCCATTCATCCTGAGTTCGGATCCGGCC
ACCCCTTCGGTCGATCGGTCAACTGACAGCGGTCAGCAGATAGATCGGAA
TCGCGTTAAGAAGATCATTCGATGGTTACCGTTAGTTGGGCCTCTCTTGG
AAGAGCCTCTTCACTGCACTCAGAAGACTAACCTAACTTAGTAGCCGTGC
TGGGATGGCATCGAGCAAGCAGCGGTAGCAGGGCCGGACCTAGTGCAAAA
GCAAAGAAGCAGAAGTCGAGGCAAGAGCTATACCTTCTGGAACCGGAGCA
ATAATTGCTATAAAGGAAGCAGATGCGCAGGAACGATCCCTAAAGCAAAT
ACTCGGAATGCTCCACGACTAAGTATACCCATTCAGACTCGCTTTTGTTC
AATTATAAATAAATAACCACTTTAATGGAGATTTATAGCATCATTCAAGT
AAATACAGATTAAGATCGTAAAAACATAAGCTTGTAATATAGCTACACCT
AATTCCAGGCCGGTTAATGCAAGAACTATAAATAAAGGACCAAGATCCCC
TATGAAATAGAAAATATTATTCATACATAGCATAGTCCAAGCGAACCCAC
TTAAAATCTTTACTAAACTATGACCGGCCATCATATTAGCAAATAAACGT
ATTCCTAAGCTTAATGCGCGAAAACAATAAGAGATTAGCTCAAGGAGTAC
TAAAAAAGGCGCTAACGGCAGTGGGACTCCTGCAGGTAAGAAGAAGCTTA
AAAAATGAAGCCCATTTCTTTGAAATCCCACTATAGTAATGCCAATAAAA
ATGGAAAATGAGAGACCCAAAGTAATGAGAAAATGGCTTGTAACTGTGAA
GCTATAAGGTATCATACCCTGGNAGATTACAAA
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