CX069755
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_BRATO (ATP synthase subunit a (Fragment) OS=Brassica tournefortii GN=ATP6 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.322e-25 Identity = 56/58 (96.55%), Postives = 56/58 (96.55%), Query Frame = -1 Query: 425 GFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 598 GFAWTMLCMN IFYFIG LGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH Sbjct: 1 GFAWTMLCMNEIFYFIGALGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 58
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_METSE (ATP synthase subunit a OS=Metridium senile GN=ATPASE6 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.033e-25 Identity = 65/153 (42.48%), Postives = 91/153 (59.48%), Query Frame = -1 Query: 425 FVIXQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 883 F+ G+ PY FTVT H ++TLGLSFSI IG+T+ G + +FLS +SY RA+SLG+RL AN+ AGH L IL+GF + ML +F ++ P+ I++ ++ LE VA++QAYVF++L IYL D I LH Sbjct: 81 FLNILGLFPYVFTVTVHIVVTLGLSFSIVIGVTLGGLWKFKWNFLSILMPAGAPLALAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAILAGFGFNMLTTAGVF----NIFPVLIMVFISLLEAAVAVIQAYVFSLLTTIYLADTIVLH 229
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_RHOP5 (ATP synthase subunit a OS=Rhodopseudomonas palustris (strain BisA53) GN=atpB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.961e-25 Identity = 62/146 (42.47%), Postives = 87/146 (59.59%), Query Frame = -1 Query: 431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868 G+IPY+FT+ SH ++T L+F +F + I GF++NGL F + S+ R +S +RLFANM+AGH +K+ + F + + YF G + PL +V+ALT LEL VA LQAYVF IL CIYLNDA++ Sbjct: 102 GIIPYTFTIASHIIVTAALAFLVFFTVLIYGFKKNGLGFFKIFVPSGVPGFILPLVVFIEVFSFFLRPISHSVRLFANMLAGHIALKVFASFIPLLAGLGIAGYF-GAVLPLGMVVALTALELLVAFLQAYVFAILTCIYLNDALH 246
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_RHOPT (ATP synthase subunit a OS=Rhodopseudomonas palustris (strain TIE-1) GN=atpB PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.174e-25 Identity = 61/146 (41.78%), Postives = 87/146 (59.59%), Query Frame = -1 Query: 431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868 G++PY+FTV+SH ++T+ L+ +F + I GF +NGL F +IS+ + +S +RLFANM+AGH +K+ + F ML + + G + PL + +ALT LEL VA LQAYVF IL CIYLNDAI+ Sbjct: 101 GIVPYTFTVSSHLIVTVALALLVFFTVLIYGFSKNGLKFFKLFVPSGVPIYILPLVVFIEVISFFLKPVSHSVRLFANMLAGHIALKVFASFV-AMLGALGVVGWFGAVLPLGLTIALTALELLVAFLQAYVFAILTCIYLNDAIH 245
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_RHOPA (ATP synthase subunit a OS=Rhodopseudomonas palustris GN=atpB PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.174e-25 Identity = 61/146 (41.78%), Postives = 87/146 (59.59%), Query Frame = -1 Query: 431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868 G++PY+FTV+SH ++T+ L+ +F + I GF +NGL F +IS+ + +S +RLFANM+AGH +K+ + F ML + + G + PL + +ALT LEL VA LQAYVF IL CIYLNDAI+ Sbjct: 101 GIVPYTFTVSSHLIVTVALALLVFFTVLIYGFSKNGLKFFKLFVPSGVPIYILPLVVFIEVISFFLKPVSHSVRLFANMLAGHIALKVFASFV-AMLGALGVVGWFGAVLPLGLTIALTALELLVAFLQAYVFAILTCIYLNDAIH 245
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_RHILO (ATP synthase subunit a OS=Rhizobium loti GN=atpB PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.174e-25 Identity = 60/146 (41.10%), Postives = 87/146 (59.59%), Query Frame = -1 Query: 431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868 G+ PY FTVTSH ++T GL+ + + + GF ++GL FL +IS+ R +SL +RLFANM+AGH +K+ SGF ++ + + G + PL + +ALT LEL VA LQAYVF +L C+YLNDA++ Sbjct: 105 GLFPYFFTVTSHIIVTFGLAILVIGTVIVYGFMKHGLGFLKLFVPKGVPLVMMVLVVPIEVISFVSRPISLSVRLFANMLAGHITLKVFSGFVVSLSALGAVGV-AGSILPLAMAVALTALELLVAFLQAYVFAVLTCMYLNDALH 249
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_BEII9 (ATP synthase subunit a OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=atpB PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.174e-25 Identity = 60/146 (41.10%), Postives = 86/146 (58.90%), Query Frame = -1 Query: 431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868 G++PY+FTVTS +T GL+ + + I G ++G HFL +IS+ R +SL IRLFANM+AGH +K++ GF +L +++ + L PL +V+ T EL VA LQAYVFTIL C+YLNDA++ Sbjct: 106 GLVPYTFTVTSQIAVTFGLAMIVIGTVVIYGLIKHGTHFLGIFAPSGVSPLLLPFMIMIEVISFISRPISLSIRLFANMLAGHITLKVMGGFVAGLLGAGSVYALVAPL-PLAMVVIFTAFELLVAFLQAYVFTILTCVYLNDAVH 250
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_SCHPO (ATP synthase subunit a OS=Schizosaccharomyces pombe GN=atp6 PE=3 SV=3) HSP 1 Score: 113.62 bits (283), Expect = 1.505e-24 Identity = 60/147 (40.82%), Postives = 87/147 (59.18%), Query Frame = -1 Query: 425 MIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 865 +IPY + T+ + TLGLS SI IG TI+G Q++ +SY R LSLGIRL AN++AGH + IL G +T + +N I + IG L P+ +++A++ LE G+A +QAYVF IL C ++ND++NLH Sbjct: 112 LIPYGYATTAQLIFTLGLSISILIGATILGLQQHKAKVFGLFLPSGTPTPLIPLLVLIEFVSYIARGLSLGIRLGANIIAGHLTMSILGGLIFTFMGLNLITFIIGFL-PITVLVAISLLEFGIAFIQAYVFAILTCGFINDSLNLH 257
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_RHOP2 (ATP synthase subunit a OS=Rhodopseudomonas palustris (strain HaA2) GN=atpB PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.505e-24 Identity = 60/146 (41.10%), Postives = 88/146 (60.27%), Query Frame = -1 Query: 431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868 G+IPY+FTV+SH ++T+ L+ +F+ + + G +NGL F +IS+ + +S +RLFANM+AGH +K+ + F ML + ++G + PL + +ALT LEL VA LQAYVF IL CIYLNDAI+ Sbjct: 101 GIIPYTFTVSSHLIVTVTLAMLVFVTVLVYGLAKNGLKFFKLFVPSGVPIYILPLVVFIEVISFFLKPVSHSVRLFANMLAGHIALKVFASFI-AMLGALGVVGWVGAVLPLGLTIALTALELLVAFLQAYVFAILTCIYLNDAIH 245
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_GRABC (ATP synthase subunit a OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=atpB PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.568e-24 Identity = 60/148 (40.54%), Postives = 85/148 (57.43%), Query Frame = -1 Query: 425 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 868 G+ PY FT TSH +T GL+ + + +T V + +GLHF S +ISY R +SL IRLFANM+AGH + ++ + F + ++ F + L P+ + + L G EL VA LQAYVF IL CIYL+DA++LH Sbjct: 104 GLFPYFFTYTSHVAVTGGLAVLVIVLVTAVALRYHGLHFFSYFFPPGAPKALAPIIVPIEIISYLSRPVSLSIRLFANMVAGHVMFEVFATFMFLLIGALGTFGYFAALLPMTLNVTLVGFELLVAFLQAYVFAILTCIYLHDAVHLH 251 The following BLAST results are available for this feature:
BLAST of CX069755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 198
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069755 ID=CX069755; Name=CX069755; organism=Citrus sinensis; type=EST; length=883bpback to top |