CX069755

Overview
NameCX069755
Unique NameCX069755
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_BARHE (ATP synthase subunit a OS=Bartonella henselae GN=atpB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.079e-22
Identity = 57/146 (39.04%), Postives = 85/146 (58.22%), Query Frame = -1
Query:  431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868
            G+ PY +T+TS  +IT  L+  +   +   GF ++G+ FL                    +IS+  R +SL +RLFANM+AGH  +K+ SGF  +M+ +  I    G + PL + +A+T LE  VA LQAYVFT+L C+YLNDA++
Sbjct:  105 GLFPYFYTITSQIMITFSLAMLVIFTVISYGFYKHGVGFLKLFVPSGVPVLILPLVTMIEVISFFSRPISLSLRLFANMLAGHITLKVFSGFIVSMIGIG-IMGVGGSILPLIMTVAITALEFLVAFLQAYVFTVLTCMYLNDAVH 249          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_RHOS4 (ATP synthase subunit a OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=atpB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.409e-22
Identity = 58/147 (39.46%), Postives = 86/147 (58.50%), Query Frame = -1
Query:  434 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFI--VLALTGLELGVAILQAYVFTILICIYLNDAI 868
            G++P SFT TSH  +T+ L+  +F+G+T +GF +NG  FL                    +ISY  R +S  IRL  NMMAGH+++K+++GFA  ++           + P+ +  V A+  LEL VA++QAYVFTIL C+YL DA+
Sbjct:  107 GLLPLSFTTTSHMAVTVPLALMVFVGVTALGFMKNGPGFLKMFWVTSAPLAIRPVLAVIEVISYFVRPVSHSIRLAGNMMAGHAVIKVIAGFASIVV-----------VSPVVVGAVTAIYALELLVAVVQAYVFTILTCVYLRDAV 242          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_RHOS1 (ATP synthase subunit a OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=atpB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.409e-22
Identity = 58/147 (39.46%), Postives = 86/147 (58.50%), Query Frame = -1
Query:  434 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFI--VLALTGLELGVAILQAYVFTILICIYLNDAI 868
            G++P SFT TSH  +T+ L+  +F+G+T +GF +NG  FL                    +ISY  R +S  IRL  NMMAGH+++K+++GFA  ++           + P+ +  V A+  LEL VA++QAYVFTIL C+YL DA+
Sbjct:  121 GLLPLSFTTTSHMAVTVPLALMVFVGVTALGFMKNGPGFLKMFWVTSAPLAIRPVLAVIEVISYFVRPVSHSIRLAGNMMAGHAVIKVIAGFASIVV-----------VSPVVVGAVTAIYALELLVAVVQAYVFTILTCVYLRDAV 256          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_BARBK (ATP synthase subunit a OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=atpB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.409e-22
Identity = 57/146 (39.04%), Postives = 86/146 (58.90%), Query Frame = -1
Query:  431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868
            G+ PY +T+TS  +IT  L+  + + +   GF ++G+ FL                    +IS+  R +SL +RLFANM+AGH  +K+ SGF  +M+ +  I    G + PL + +A+T LE  VA LQAYVFT+L C+YLNDA++
Sbjct:  105 GLFPYFYTITSQIMITFSLAMLVILTVIGCGFYKHGIGFLKLFVPSGVPVMILPLVTVIEVISFFSRPISLSLRLFANMLAGHITLKVFSGFIVSMVGLGFIGVG-GSILPLIMTVAITALEFLVAFLQAYVFTVLTCMYLNDAVH 249          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_BART1 (ATP synthase subunit a OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=atpB PE=3 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.840e-22
Identity = 58/146 (39.73%), Postives = 86/146 (58.90%), Query Frame = -1
Query:  431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868
            G+ PY +TVTS  +IT  L+  + + +   GF ++G+ FL                    +IS+  R +SL +RLFANM+AGH  +K+ +GF  +M+ +  I    G + PL + +A+T LE  VA LQAYVFT+L C+YLNDAI+
Sbjct:  105 GLFPYFYTVTSQIMITFSLAMVVILTVIGYGFYKHGISFLKLFVPSGVPVVVLPLVTMIEIISFLSRPISLSLRLFANMLAGHITLKVFAGFIVSMIGVG-IVGVGGAVLPLIMTVAITALEFLVAFLQAYVFTVLTCMYLNDAIH 249          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_RHISN (ATP synthase subunit a OS=Rhizobium sp. (strain NGR234) GN=atpB PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.403e-22
Identity = 57/146 (39.04%), Postives = 83/146 (56.85%), Query Frame = -1
Query:  431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868
            GM PY FTVTS  ++T  L+  +   + + GF ++G  FL                    +IS+  R +SL +RLFANM+AGH  +K+ +GF  ++     +    G + PL + +ALTGLE  VA LQAYVF +L C+YLNDA++
Sbjct:  102 GMFPYFFTVTSQIIVTFALAVFVIGTVILYGFYKHGFGFLKLFVPHGVPGALLPLVVSIEVISFLSRPISLSVRLFANMLAGHITLKVFAGFVASLSAFGALGIG-GAILPLIMTVALTGLEFLVAFLQAYVFAVLTCMYLNDAVH 246          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_GLUOX (ATP synthase subunit a OS=Gluconobacter oxydans GN=atpB PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.099e-22
Identity = 59/145 (40.69%), Postives = 83/145 (57.24%), Query Frame = -1
Query:  434 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAI 868
            G++P+SFT TSH  +T GL+  +FI   +   +  G+ FL                    +IS+  R +SL IRLFANM+AGH L+++ +GF   ML     F  +  + P+ I +ALT LEL V +LQAYVF IL CIYL +A+
Sbjct:  104 GLLPFSFTYTSHIAVTFGLAIMVFIISILASIRFQGVGFLKHFLPAGTPVWLAPLLVPIEIISFLSRPVSLSIRLFANMVAGHVLLEVFAGFT-IMLAGLGAFGHVLAIAPIAINIALTALELLVGVLQAYVFAILTCIYLREAV 247          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_OLICO (ATP synthase subunit a OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=atpB PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.992e-22
Identity = 57/146 (39.04%), Postives = 85/146 (58.22%), Query Frame = -1
Query:  431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868
            G+IPY+F+VTSH ++T+ L+  +F+ + + G  +NGL F                     +IS+  R +S  +RLFANM+AGH  +K+ + F  T L    +    G   PL +  A++ LE+ VA+LQAYVF IL CIYLNDA++
Sbjct:  102 GVIPYTFSVTSHLIVTVALALIVFLTVLLYGLYKNGLKFFRVFVPSGVPIYILPLIAMIEVISFLSRPVSHSVRLFANMLAGHITLKVFASFV-TSLGALGVAGIAGAALPLAMTTAISILEVLVALLQAYVFAILTCIYLNDALH 246          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP6_NEOSM (ATP synthase subunit a OS=Neorickettsia sennetsu (strain Miyayama) GN=atpB PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.992e-22
Identity = 53/146 (36.30%), Postives = 88/146 (60.27%), Query Frame = -1
Query:  425 IPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 862
            +P SFTVTSH ++TL L+  +FI +T++G ++ G+ F +                   + +Y FR +SL IRL ANM+AGH+++K+++GF +    +      I  L  LF+V+ +   E+ +A+LQAY+F +L C+YLND++  H
Sbjct:  105 LPMSFTVTSHIVVTLALAMVVFIFVTLIGLKKQGMGFFAMFLPDGTPNWIAPLMIFLEVCTYLFRPISLAIRLTANMIAGHTILKVIAGFVYPTSLL------ISPLSFLFVVVLIV-FEVFIAMLQAYIFVMLTCVYLNDSLFKH 243          
BLAST of CX069755 vs. ExPASy Swiss-Prot
Match: ATP61_OCHA4 (ATP synthase subunit a 1 OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=atpB1 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.992e-22
Identity = 55/146 (37.67%), Postives = 85/146 (58.22%), Query Frame = -1
Query:  431 GMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAIN 868
            G+ PY +TVTS  ++T  L+  +   + + GF ++GL FL                    +IS+  R +SL +RLFANM+AGH  +K+ +GF  ++  +  I    G + PL + +A+T LE  VA LQAYVFT+L C+Y+NDA++
Sbjct:  102 GLFPYFYTVTSQIIVTFALAVLVIGTVIVYGFFKHGLGFLKLFVPSGVPGIIVPLVVAIEIISFLSRPISLSVRLFANMLAGHITLKVFAGFVVSLAALGPIGIG-GAVLPLIMTVAITALEFLVAFLQAYVFTVLTCMYINDAVH 246          
The following BLAST results are available for this feature:
BLAST of CX069755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
ATP6_BARHE1.079e-2239.04ATP synthase subunit a OS=Bartonella henselae GN=a... [more]
ATP6_RHOS41.409e-2239.46ATP synthase subunit a OS=Rhodobacter sphaeroides ... [more]
ATP6_RHOS11.409e-2239.46ATP synthase subunit a OS=Rhodobacter sphaeroides ... [more]
ATP6_BARBK1.409e-2239.04ATP synthase subunit a OS=Bartonella bacilliformis... [more]
ATP6_BART11.840e-2239.73ATP synthase subunit a OS=Bartonella tribocorum (s... [more]
ATP6_RHISN2.403e-2239.04ATP synthase subunit a OS=Rhizobium sp. (strain NG... [more]
ATP6_GLUOX4.099e-2240.69ATP synthase subunit a OS=Gluconobacter oxydans GN... [more]
ATP6_OLICO6.992e-2239.04ATP synthase subunit a OS=Oligotropha carboxidovor... [more]
ATP6_NEOSM6.992e-2236.30ATP synthase subunit a OS=Neorickettsia sennetsu (... [more]
ATP61_OCHA46.992e-2237.67ATP synthase subunit a 1 OS=Ochrobactrum anthropi ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12F02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12F02-L4-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069755 ID=CX069755; Name=CX069755; organism=Citrus sinensis; type=EST; length=883bp
TGCATGCTAAGATTCAAAGCTATCCATTCATCCTGAGTTCGGATCCGGCC
ACCCCTTCGGTCGATCGGTCAACTGACAGCGGTCAGCAGATAGATCGGAA
TCGCGTTAAGAAGATCATTCGATGGTTACCGTTAGTTGGGCCTCTCTTGG
AAGAGCCTCTTCACTGCACTCAGAAGACTAACCTAACTTAGTAGCCGTGC
TGGGATGGCATCGAGCAAGCAGCGGTAGCAGGGCCGGACCTAGTGCAAAA
GCAAAGAAGCAGAAGTCGAGGCAAGAGCTATACCTTCTGGAACCGGAGCA
ATAATTGCTATAAAGGAAGCAGATGCGCAGGAACGATCCCTAAAGCAAAT
ACTCGGAATGCTCCACGACTAAGTATACCCATTCAGACTCGCTTTTGTTC
AATTATAAATAAATAACCACTTTAATGGAGATTTATAGCATCATTCAAGT
AAATACAGATTAAGATCGTAAAAACATAAGCTTGTAATATAGCTACACCT
AATTCCAGGCCGGTTAATGCAAGAACTATAAATAAAGGACCAAGATCCCC
TATGAAATAGAAAATATTATTCATACATAGCATAGTCCAAGCGAACCCAC
TTAAAATCTTTACTAAACTATGACCGGCCATCATATTAGCAAATAAACGT
ATTCCTAAGCTTAATGCGCGAAAACAATAAGAGATTAGCTCAAGGAGTAC
TAAAAAAGGCGCTAACGGCAGTGGGACTCCTGCAGGTAAGAAGAAGCTTA
AAAAATGAAGCCCATTTCTTTGAAATCCCACTATAGTAATGCCAATAAAA
ATGGAAAATGAGAGACCCAAAGTAATGAGAAAATGGCTTGTAACTGTGAA
GCTATAAGGTATCATACCCTGGNAGATTACAAA
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