CX069753
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_DRIGR (30S ribosomal protein S16, chloroplastic OS=Drimys granadensis GN=rps16 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.090e-27 Identity = 60/74 (81.08%), Postives = 66/74 (89.19%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVSLNQTK 284 Q A+YRIVAID RS+REGRDLRKVGFYDPI NQT+ NVPAILYFL KGAQPTGTVHDIS+KA VF E+ +NQTK Sbjct: 13 QRAIYRIVAIDVRSQREGRDLRKVGFYDPIKNQTYSNVPAILYFLEKGAQPTGTVHDISKKAEVFKELRINQTK 86
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_LACSA (30S ribosomal protein S16, chloroplastic OS=Lactuca sativa GN=rps16 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.976e-27 Identity = 62/75 (82.67%), Postives = 65/75 (86.67%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVSLNQTKF 287 Q AVYRIVAID RSRREGRDLRKVGFYDPI NQT+LNVPAILYFL KGAQPTGTV DI +KA VF E+ NQTKF Sbjct: 13 QRAVYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILKKAEVFKELCPNQTKF 87
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_SOYBN (30S ribosomal protein S16, chloroplastic OS=Glycine max GN=rps16 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.111e-27 Identity = 61/77 (79.22%), Postives = 68/77 (88.31%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVSLN-QTKFY 290 Q AVYRIVAID RSRREGRDLRKVGFYDPI NQT+LN+P ILYFL +GAQPTGTV DIS++AGVF E+S N QTKF+ Sbjct: 13 QRAVYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNIPVILYFLERGAQPTGTVQDISKRAGVFMELSSNQQTKFH 89
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_CALFG (30S ribosomal protein S16, chloroplastic OS=Calycanthus floridus var. glaucus GN=rps16 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.030e-26 Identity = 59/74 (79.73%), Postives = 65/74 (87.84%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVSLNQTK 284 Q A+YRIVAID RSRREGRDLRKVGFYDPINNQT+LNVP ILYFL KGAQPTGTV+DI +KA VF E+ +NQ K Sbjct: 13 QRAIYRIVAIDVRSRREGRDLRKVGFYDPINNQTYLNVPLILYFLEKGAQPTGTVYDILKKAEVFKELQINQKK 86
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_OENEH (30S ribosomal protein S16, chloroplastic OS=Oenothera elata subsp. hookeri GN=rps16 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.462e-26 Identity = 59/72 (81.94%), Postives = 65/72 (90.28%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVSLNQ 278 Q AVYRIVAID RSRREGRDL KVGFYDPINN+T+L++P ILYFL KGAQPTGTV+DI +KAGVFTE SLNQ Sbjct: 13 QRAVYRIVAIDVRSRREGRDLWKVGFYDPINNKTYLDIPGILYFLEKGAQPTGTVYDILKKAGVFTEFSLNQ 84
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_ATRBE (30S ribosomal protein S16, chloroplastic OS=Atropa belladonna GN=rps16 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.713e-26 Identity = 60/75 (80.00%), Postives = 64/75 (85.33%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVSLNQTKF 287 Q AVYRIVAID RSRREG+DLRKVGFYDPI NQT+LNVPAILYFL KGAQPTGTV DI +KA VF E+ NQ KF Sbjct: 13 QRAVYRIVAIDVRSRREGKDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILKKAEVFKELRPNQPKF 87
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_SOLTU (30S ribosomal protein S16, chloroplastic OS=Solanum tuberosum GN=rps16 PE=3 SV=4) HSP 1 Score: 115.931 bits (289), Expect = 2.931e-25 Identity = 59/75 (78.67%), Postives = 64/75 (85.33%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVSLNQTKF 287 Q AVYRIVAID RSRREG+DL+KVGFYDPI NQT+LNVPAILYFL KGAQPT TV DI +KA VF E+ LNQ KF Sbjct: 13 QRAVYRIVAIDVRSRREGKDLQKVGFYDPIKNQTYLNVPAILYFLEKGAQPTETVQDILKKAEVFKELRLNQPKF 87
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_SOLLC (30S ribosomal protein S16, chloroplastic OS=Solanum lycopersicum GN=rps16 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.931e-25 Identity = 59/75 (78.67%), Postives = 64/75 (85.33%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVSLNQTKF 287 Q AVYRIVAID RSRREG+DL+KVGFYDPI NQT+LNVPAILYFL KGAQPT TV DI +KA VF E+ LNQ KF Sbjct: 13 QRAVYRIVAIDVRSRREGKDLQKVGFYDPIKNQTYLNVPAILYFLEKGAQPTETVQDILKKAEVFKELRLNQPKF 87
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_SOLBU (30S ribosomal protein S16, chloroplastic OS=Solanum bulbocastanum GN=rps16 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.931e-25 Identity = 59/75 (78.67%), Postives = 64/75 (85.33%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVSLNQTKF 287 Q AVYRIVAID RSRREG+DL+KVGFYDPI NQT+LNVPAILYFL KGAQPT TV DI +KA VF E+ LNQ KF Sbjct: 13 QRAVYRIVAIDVRSRREGKDLQKVGFYDPIKNQTYLNVPAILYFLEKGAQPTETVQDILKKAEVFKELRLNQPKF 87
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_HELAN (30S ribosomal protein S16, chloroplastic OS=Helianthus annuus GN=rps16 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.828e-25 Identity = 58/70 (82.86%), Postives = 61/70 (87.14%), Query Frame = 3 Query: 78 RIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVSLNQTKF 287 RIVAID RSRREGRDLRKVGFYDPI NQT+LNVPAILYFL KGAQPTGTV DI +KA VF E+ NQTKF Sbjct: 14 RIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILKKAEVFKELGPNQTKF 83 The following BLAST results are available for this feature:
BLAST of CX069753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069753 ID=CX069753; Name=CX069753; organism=Citrus sinensis; type=EST; length=868bpback to top |