CX069753
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_AGRST (30S ribosomal protein S16, chloroplastic OS=Agrostis stolonifera GN=rps16 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.778e-22 Identity = 55/67 (82.09%), Postives = 58/67 (86.57%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTE 263 Q AVYRIVAID RSRREGRDLRKVGFYDPI NQT LNVPAILYFL KGAQPT TV+DI +KA +F E Sbjct: 13 QQAVYRIVAIDVRSRREGRDLRKVGFYDPIKNQTCLNVPAILYFLEKGAQPTRTVYDILRKAELFKE 79
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_DAUCA (30S ribosomal protein S16, chloroplastic OS=Daucus carota GN=rps16 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.322e-22 Identity = 53/65 (81.54%), Postives = 57/65 (87.69%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVF 257 Q AVYRIVAID RSRREGRDLR VGFYDPI NQ++LNVPAILYFL KGAQPTGTV D+ +KA VF Sbjct: 13 QRAVYRIVAIDVRSRREGRDLRNVGFYDPIKNQSYLNVPAILYFLEKGAQPTGTVRDLLKKAEVF 77
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_WHEAT (30S ribosomal protein S16, chloroplastic OS=Triticum aestivum GN=rps16 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.033e-22 Identity = 55/67 (82.09%), Postives = 57/67 (85.07%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTE 263 Q AVYRIVAID RSRREGRDLRKVGFYDPI NQT LNVPAILYFL KGAQPT TV+DI +KA F E Sbjct: 13 QQAVYRIVAIDVRSRREGRDLRKVGFYDPIKNQTCLNVPAILYFLEKGAQPTRTVYDILRKAEFFKE 79
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_HORVU (30S ribosomal protein S16, chloroplastic OS=Hordeum vulgare GN=rps16 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.033e-22 Identity = 55/67 (82.09%), Postives = 57/67 (85.07%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTE 263 Q AVYRIVAID RSRREGRDLRKVGFYDPI NQT LNVPAILYFL KGAQPT TV+DI +KA F E Sbjct: 13 QQAVYRIVAIDVRSRREGRDLRKVGFYDPIKNQTCLNVPAILYFLEKGAQPTRTVYDILRKAEFFKE 79
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_ORYSJ (30S ribosomal protein S16, chloroplastic OS=Oryza sativa subsp. japonica GN=rps16 PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 6.757e-22 Identity = 55/67 (82.09%), Postives = 56/67 (83.58%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTE 263 Q AVYRIVAID RSRREGRDLRKVGFYDPI NQT LNVPAILYFL KGAQPT TV DI +KA F E Sbjct: 13 QRAVYRIVAIDVRSRREGRDLRKVGFYDPIKNQTCLNVPAILYFLEKGAQPTRTVSDILRKAEFFKE 79
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_ORYSI (30S ribosomal protein S16, chloroplastic OS=Oryza sativa subsp. indica GN=rps16 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.757e-22 Identity = 55/67 (82.09%), Postives = 56/67 (83.58%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTE 263 Q AVYRIVAID RSRREGRDLRKVGFYDPI NQT LNVPAILYFL KGAQPT TV DI +KA F E Sbjct: 13 QRAVYRIVAIDVRSRREGRDLRKVGFYDPIKNQTCLNVPAILYFLEKGAQPTRTVSDILRKAEFFKE 79
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_ORYSA (30S ribosomal protein S16, chloroplastic OS=Oryza sativa GN=rps16 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.757e-22 Identity = 55/67 (82.09%), Postives = 56/67 (83.58%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTE 263 Q AVYRIVAID RSRREGRDLRKVGFYDPI NQT LNVPAILYFL KGAQPT TV DI +KA F E Sbjct: 13 QRAVYRIVAIDVRSRREGRDLRKVGFYDPIKNQTCLNVPAILYFLEKGAQPTRTVSDILRKAEFFKE 79
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_ORYNI (30S ribosomal protein S16, chloroplastic OS=Oryza nivara GN=rps16 PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 6.757e-22 Identity = 55/67 (82.09%), Postives = 56/67 (83.58%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTE 263 Q AVYRIVAID RSRREGRDLRKVGFYDPI NQT LNVPAILYFL KGAQPT TV DI +KA F E Sbjct: 13 QRAVYRIVAIDVRSRREGRDLRKVGFYDPIKNQTCLNVPAILYFLEKGAQPTRTVSDILRKAEFFKE 79
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_SORBI (30S ribosomal protein S16, chloroplastic OS=Sorghum bicolor GN=rps16 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.825e-22 Identity = 53/67 (79.10%), Postives = 57/67 (85.07%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTE 263 Q A+YRIVAID RSRREGRDLRKVGFYDPI NQT LNVPAILYFL KGAQPT TV+DI +KA F + Sbjct: 13 QQAIYRIVAIDVRSRREGRDLRKVGFYDPIKNQTCLNVPAILYFLEKGAQPTRTVYDILRKAEFFKD 79
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_SACOF (30S ribosomal protein S16, chloroplastic OS=Saccharum officinarum GN=rps16 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.825e-22 Identity = 53/67 (79.10%), Postives = 57/67 (85.07%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTE 263 Q A+YRIVAID RSRREGRDLRKVGFYDPI NQT LNVPAILYFL KGAQPT TV+DI +KA F + Sbjct: 13 QQAIYRIVAIDVRSRREGRDLRKVGFYDPIKNQTCLNVPAILYFLEKGAQPTRTVYDILRKAEFFKD 79 The following BLAST results are available for this feature:
BLAST of CX069753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069753 ID=CX069753; Name=CX069753; organism=Citrus sinensis; type=EST; length=868bpback to top |