CX069753
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_SACHY (30S ribosomal protein S16, chloroplastic OS=Saccharum hybrid GN=rps16 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.825e-22 Identity = 53/67 (79.10%), Postives = 57/67 (85.07%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTE 263 Q A+YRIVAID RSRREGRDLRKVGFYDPI NQT LNVPAILYFL KGAQPT TV+DI +KA F + Sbjct: 13 QQAIYRIVAIDVRSRREGRDLRKVGFYDPIKNQTCLNVPAILYFLEKGAQPTRTVYDILRKAEFFKD 79
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_MAIZE (30S ribosomal protein S16, chloroplastic OS=Zea mays GN=rps16 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.825e-22 Identity = 53/67 (79.10%), Postives = 57/67 (85.07%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTE 263 Q A+YRIVAID RSRREGRDLRKVGFYDPI NQT LNVPAILYFL KGAQPT TV+DI +KA F + Sbjct: 13 QQAIYRIVAIDVRSRREGRDLRKVGFYDPIKNQTCLNVPAILYFLEKGAQPTRTVYDILRKAEFFKD 79
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_JASNU (30S ribosomal protein S16, chloroplastic OS=Jasminum nudiflorum GN=rps16 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.825e-22 Identity = 55/75 (73.33%), Postives = 60/75 (80.00%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVSLNQTKF 287 Q AVY+IVAID RS REG+ LRKVGFYDPI NQT LNV AILYFL KGAQPTGTV DI +KA + E+ NQTKF Sbjct: 13 QRAVYQIVAIDVRSPREGKALRKVGFYDPIKNQTDLNVRAILYFLEKGAQPTGTVQDILKKAEIDKELRPNQTKF 87
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_AMBTC (30S ribosomal protein S16, chloroplastic OS=Amborella trichopoda GN=rps16 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.153e-21 Identity = 52/65 (80.00%), Postives = 56/65 (86.15%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVF 257 Q +YRIVAID RSRR+GR LRKVGFYDPI NQT+ NVPAILYFL KGAQPT TVHDIS+KA VF Sbjct: 13 QRVIYRIVAIDVRSRRDGRALRKVGFYDPIKNQTYSNVPAILYFLEKGAQPTVTVHDISKKAEVF 77
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_PHAAO (30S ribosomal protein S16, chloroplastic OS=Phalaenopsis aphrodite subsp. formosana GN=rps16 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.568e-21 Identity = 52/74 (70.27%), Postives = 59/74 (79.73%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVSLNQTK 284 Q A+YRIVAID RSRREGRDL+KVGFYDPI NQT+ NVPAILYFL KGAQPT TV+DI +K F E ++ K Sbjct: 13 QRAIYRIVAIDVRSRREGRDLQKVGFYDPIKNQTYSNVPAILYFLEKGAQPTETVYDILRKTEFFKEFRISFDK 86
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_ARATH (30S ribosomal protein S16, chloroplastic OS=Arabidopsis thaliana GN=rps16 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.568e-21 Identity = 52/67 (77.61%), Postives = 56/67 (83.58%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTE 263 Q AVYRI+AID R RREGRDL KVGFYDPI NQT LN+ AIL FL KGAQPT T HDIS+KAG+FTE Sbjct: 13 QRAVYRILAIDVRYRREGRDLSKVGFYDPITNQTFLNLSAILDFLKKGAQPTRTAHDISKKAGIFTE 79
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_HUPLU (30S ribosomal protein S16, chloroplastic OS=Huperzia lucidula GN=rps16 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.612e-15 Identity = 40/68 (58.82%), Postives = 51/68 (75.00%), Query Frame = 3 Query: 63 Q*AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEV 266 Q A YRIVAID RSR GR +++VG YDPI +QT N+P I+YF+ +GAQPT TV DI QKA +F ++ Sbjct: 13 QQATYRIVAIDARSRGXGRAIQEVGSYDPIKDQTQXNMPTIVYFIERGAQPTETVKDILQKAEIFAQL 80
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_STAPU (30S ribosomal protein S16, chloroplastic OS=Staurastrum punctulatum GN=rps16 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.591e-15 Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 3 Query: 75 YRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVF 257 YRI+AID R RR+G+ L++VGFYDP+ ++T LNVPAIL L GAQPT TV I QKAGVF Sbjct: 17 YRIIAIDVRCRRDGKALKEVGFYDPLKDKTQLNVPAILTLLQHGAQPTDTVSHILQKAGVF 77
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_ZYGCR (30S ribosomal protein S16, chloroplastic OS=Zygnema circumcarinatum GN=rps16 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.365e-14 Identity = 37/64 (57.81%), Postives = 50/64 (78.12%), Query Frame = 3 Query: 75 YRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEV 266 YRI+AID +SRR+GR L++VGFYDP +QTHL+V I+ F+ +GAQPT TV I +AGVF ++ Sbjct: 17 YRIIAIDVKSRRQGRALKEVGFYDPRKDQTHLDVATIITFIQQGAQPTDTVSHILNRAGVFEQI 80
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_ANTFO (30S ribosomal protein S16, chloroplastic OS=Anthoceros formosae GN=rps16 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.970e-13 Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = 3 Query: 75 YRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVSLN 275 YRIVAID +SRREGR L +VGFY+ +QT L++ AI+ + +GAQPT TV+DI +KAG+F + N Sbjct: 17 YRIVAIDAQSRREGRALEEVGFYNLRKDQTQLDILAIVNLIREGAQPTETVYDILRKAGIFERIKAN 83 The following BLAST results are available for this feature:
BLAST of CX069753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069753 ID=CX069753; Name=CX069753; organism=Citrus sinensis; type=EST; length=868bpback to top |