CX069753
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_MESVI (30S ribosomal protein S16, chloroplastic OS=Mesostigma viride GN=rps16 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.390e-13 Identity = 34/66 (51.52%), Postives = 51/66 (77.27%), Query Frame = 3 Query: 75 YRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVSL 272 YR++AID R RR+G+ L+++GFYDPI +T L+VP I+++L GAQ + TV ++ QKA VF ++SL Sbjct: 17 YRVIAIDSRCRRDGKALKELGFYDPIAGKTQLDVPNIIFYLKAGAQTSETVGNLLQKAKVFNQLSL 82
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RS16_CYAA5 (30S ribosomal protein S16 OS=Cyanothece sp. (strain ATCC 51142) GN=rpsP PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.488e-13 Identity = 37/65 (56.92%), Postives = 49/65 (75.38%), Query Frame = 3 Query: 75 YRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVS 269 YRIVAI+ SRR+GR L ++GFY+P ++T LNVPAI+ L +GAQPT TV I +KA VF +V+ Sbjct: 17 YRIVAINSASRRDGRPLEELGFYNPRTDETRLNVPAIVTRLKQGAQPTETVRSILEKAKVFEQVN 81
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RS16_CYAP8 (30S ribosomal protein S16 OS=Cyanothece sp. (strain PCC 8801) GN=rpsP PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.779e-13 Identity = 37/65 (56.92%), Postives = 48/65 (73.85%), Query Frame = 3 Query: 75 YRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVS 269 YRIVAI+ SRR+GR L ++GFY+P ++T LNVP I+ L +GAQPT TV I QKA VF +V+ Sbjct: 17 YRIVAINSSSRRDGRPLEELGFYNPRTDETRLNVPGIVKRLKEGAQPTETVRSILQKAQVFEQVN 81
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RS16_CYAP7 (30S ribosomal protein S16 OS=Cyanothece sp. (strain PCC 7424) GN=rpsP PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.179e-12 Identity = 37/65 (56.92%), Postives = 48/65 (73.85%), Query Frame = 3 Query: 75 YRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVS 269 YRIVA+ SRR+GR L ++GFY+P ++T LNVPAI+ L GAQPT TV +I QKA VF +V+ Sbjct: 17 YRIVAMRSTSRRDGRPLEELGFYNPRTDETRLNVPAIVKRLQDGAQPTETVRNILQKAKVFEQVN 81
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RR16_CHAGL (30S ribosomal protein S16, chloroplastic OS=Chaetosphaeridium globosum GN=rps16 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.081e-11 Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 75 YRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEV 266 YRI+AID ++RREG+ L+++GFY+PI N L+V I+ FL GA+PT TV DI K VF ++ Sbjct: 17 YRIIAIDAKNRREGKALKELGFYNPIKNSIQLDVQNIILFLKNGAKPTDTVFDILNKHQVFEQM 80
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RS16_NOSP7 (30S ribosomal protein S16 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rpsP PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.366e-11 Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 69 AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVS 269 A YRIVAI+ +RR+GR L ++GFY+P ++ L+VP I+ L +GAQPT TV I KA VF +VS Sbjct: 15 ASYRIVAINNLARRDGRPLEELGFYNPRTDEVRLDVPGIVKRLQQGAQPTDTVRRILVKANVFEQVS 81
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RS16_ANAVT (30S ribosomal protein S16 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rpsP PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.008e-11 Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 69 AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVS 269 A YRIVA++ SRR+GR L ++G+Y+P ++ L+VP I+ L +GAQPT TV I QK VF +VS Sbjct: 15 ASYRIVAMNNLSRRDGRPLEELGYYNPRTDEVRLDVPGIVKRLQQGAQPTDTVRRILQKQNVFEQVS 81
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RS16_ANASP (30S ribosomal protein S16 OS=Anabaena sp. (strain PCC 7120) GN=rpsP PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.008e-11 Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 69 AVYRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEVS 269 A YRIVA++ SRR+GR L ++G+Y+P ++ L+VP I+ L +GAQPT TV I QK VF +VS Sbjct: 15 ASYRIVAMNNLSRRDGRPLEELGYYNPRTDEVRLDVPGIVKRLQQGAQPTDTVRRILQKQNVFEQVS 81
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RS16_SYNP6 (30S ribosomal protein S16 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpsP PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.153e-11 Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 75 YRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEV 266 YRIVA + SRR+G L ++GFY+P N+T L+VPAI+ L +GAQPT TV I +KA +F ++ Sbjct: 17 YRIVATNSTSRRDGLPLEELGFYNPRTNETRLDVPAIVRRLQQGAQPTETVRSILRKAQIFEQL 80
BLAST of CX069753 vs. ExPASy Swiss-Prot
Match: RS16_SYNE7 (30S ribosomal protein S16 OS=Synechococcus elongatus (strain PCC 7942) GN=rpsP PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.153e-11 Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 75 YRIVAIDGRSRREGRDLRKVGFYDPINNQTHLNVPAILYFLAKGAQPTGTVHDISQKAGVFTEV 266 YRIVA + SRR+G L ++GFY+P N+T L+VPAI+ L +GAQPT TV I +KA +F ++ Sbjct: 17 YRIVATNSTSRRDGLPLEELGFYNPRTNETRLDVPAIVRRLQQGAQPTETVRSILRKAQIFEQL 80 The following BLAST results are available for this feature:
BLAST of CX069753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069753 ID=CX069753; Name=CX069753; organism=Citrus sinensis; type=EST; length=868bpback to top |