CX069739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 8.047e-41 Identity = 87/166 (52.41%), Postives = 115/166 (69.28%), Query Frame = -3 Query: 119 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNS--DAYKAELSVNRVTLVKDGANSSKGSMMDFSCCA 610 + +DGK VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TR S+F +V+RWL+EL H D + MLVGNK DL + V T+EGK+ AE E L+FMETSAL+STNVE AF V+ +IY +S++ + + DA ++ + D + KG CC+ Sbjct: 56 LQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDAGSGPGKGEKINIKDDVSAVKKG-----GCCS 216
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RB11A_RAT (Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1 SV=3) HSP 1 Score: 165.622 bits (418), Expect = 1.793e-40 Identity = 80/139 (57.55%), Postives = 109/139 (78.42%), Query Frame = -3 Query: 194 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDAYKAELS 610 + +DGK +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI + ++ +V+RWL+EL H D+ + MLVGNK DL +R V T+E ++ AE+ GL F+ETSALDSTNVEAAF+ ++ EIY +S+K + SD + ++S Sbjct: 53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM-SDRRENDMS 190
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RB11A_RABIT (Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2 SV=3) HSP 1 Score: 165.622 bits (418), Expect = 1.793e-40 Identity = 80/139 (57.55%), Postives = 109/139 (78.42%), Query Frame = -3 Query: 194 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDAYKAELS 610 + +DGK +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI + ++ +V+RWL+EL H D+ + MLVGNK DL +R V T+E ++ AE+ GL F+ETSALDSTNVEAAF+ ++ EIY +S+K + SD + ++S Sbjct: 53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM-SDRRENDMS 190
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RB11A_PONAB (Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3) HSP 1 Score: 165.622 bits (418), Expect = 1.793e-40 Identity = 80/139 (57.55%), Postives = 109/139 (78.42%), Query Frame = -3 Query: 194 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDAYKAELS 610 + +DGK +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI + ++ +V+RWL+EL H D+ + MLVGNK DL +R V T+E ++ AE+ GL F+ETSALDSTNVEAAF+ ++ EIY +S+K + SD + ++S Sbjct: 53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM-SDRRENDMS 190
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RB11A_PIG (Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3) HSP 1 Score: 165.622 bits (418), Expect = 1.793e-40 Identity = 80/139 (57.55%), Postives = 109/139 (78.42%), Query Frame = -3 Query: 194 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDAYKAELS 610 + +DGK +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI + ++ +V+RWL+EL H D+ + MLVGNK DL +R V T+E ++ AE+ GL F+ETSALDSTNVEAAF+ ++ EIY +S+K + SD + ++S Sbjct: 53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM-SDRRENDMS 190
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RB11A_MOUSE (Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3) HSP 1 Score: 165.622 bits (418), Expect = 1.793e-40 Identity = 80/139 (57.55%), Postives = 109/139 (78.42%), Query Frame = -3 Query: 194 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDAYKAELS 610 + +DGK +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI + ++ +V+RWL+EL H D+ + MLVGNK DL +R V T+E ++ AE+ GL F+ETSALDSTNVEAAF+ ++ EIY +S+K + SD + ++S Sbjct: 53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM-SDRRENDMS 190
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RB11A_HUMAN (Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3) HSP 1 Score: 165.622 bits (418), Expect = 1.793e-40 Identity = 80/139 (57.55%), Postives = 109/139 (78.42%), Query Frame = -3 Query: 194 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDAYKAELS 610 + +DGK +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI + ++ +V+RWL+EL H D+ + MLVGNK DL +R V T+E ++ AE+ GL F+ETSALDSTNVEAAF+ ++ EIY +S+K + SD + ++S Sbjct: 53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM-SDRRENDMS 190
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.793e-40 Identity = 80/139 (57.55%), Postives = 109/139 (78.42%), Query Frame = -3 Query: 194 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDAYKAELS 610 + +DGK +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI + ++ +V+RWL+EL H D+ + MLVGNK DL +R V T+E ++ AE+ GL F+ETSALDSTNVEAAF+ ++ EIY +S+K + SD + ++S Sbjct: 53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM-SDRRENDMS 190
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3) HSP 1 Score: 165.622 bits (418), Expect = 1.793e-40 Identity = 80/139 (57.55%), Postives = 109/139 (78.42%), Query Frame = -3 Query: 194 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDAYKAELS 610 + +DGK +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI + ++ +V+RWL+EL H D+ + MLVGNK DL +R V T+E ++ AE+ GL F+ETSALDSTNVEAAF+ ++ EIY +S+K + SD + ++S Sbjct: 53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM-SDRRENDMS 190
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.341e-40 Identity = 90/165 (54.55%), Postives = 111/165 (67.27%), Query Frame = -3 Query: 119 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDAYKAELSVNR-VTLVKDGANSSKGSMMDFSCCA 610 + +D K VKAQIWDTAGQER+RA+TSAYYRGAVGALVVYDITR +F +V+RWL+EL H D + MLVGNK DL +R VSTE+ K+ AE E FFMETSAL+S NVE AF V+ EIY + RK L A L + + + KD ++ K CC+ Sbjct: 56 IRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGDDPAALPKGQTINVGKDDVSAVK----KVGCCS 216 The following BLAST results are available for this feature:
BLAST of CX069739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069739 ID=CX069739; Name=CX069739; organism=Citrus sinensis; type=EST; length=621bpback to top |