CX069739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RB11B_BOVIN (Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3) HSP 1 Score: 161.77 bits (408), Expect = 2.589e-39 Identity = 81/163 (49.69%), Postives = 109/163 (66.87%), Query Frame = -3 Query: 122 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDAYKAELSVNRVTLVKDGANSSKGSMMDFSCC 610 + +DGK +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI + ++ +V+RWL+EL H D+ + MLVGNK DL +R V T+E ++ AE+ L F+ETSALDSTNVE AF+ ++ EIY +S+K + A E N V + + CC Sbjct: 53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.381e-39 Identity = 77/130 (59.23%), Postives = 102/130 (78.46%), Query Frame = -3 Query: 215 IDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSD 604 I K VKAQIWDTAGQER+RAVTSAYYRGAVGA++VYDIT+R +F+ + RWLEEL H D + ML+GNK DL+ R V TE+ K A++EGLFF+ETSA+++TN+E AF V+ EI++ +++K L +D Sbjct: 59 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAAD 188
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RB11B_MOUSE (Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3) HSP 1 Score: 161.384 bits (407), Expect = 3.381e-39 Identity = 81/163 (49.69%), Postives = 109/163 (66.87%), Query Frame = -3 Query: 122 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDAYKAELSVNRVTLVKDGANSSKGSMMDFSCC 610 + +DGK +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI + ++ +V+RWL+EL H D+ + MLVGNK DL +R V T+E ++ AE+ L F+ETSALDSTNVE AF+ ++ EIY +S+K + A E N V + + CC Sbjct: 53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNNVVDISVPPTTDGQRPNKLQCC 215
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 4.415e-39 Identity = 80/161 (49.69%), Postives = 109/161 (67.70%), Query Frame = -3 Query: 122 IDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDAYKAELSVNRVTLVKDGANSSKGSMMDFSCC 604 +D K++KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDIT++SSF++V RWL+EL H D+ + MLVGNK DL +R VSTEE ++ A E L F+ETSA+D++NVE AF+ V+ EI+ +S + L + + + + N CC Sbjct: 54 LDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDGVHPTAGQTLNIAPTMNDLNKKKSSSQCC 214
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAB25_HUMAN (Ras-related protein Rab-25 OS=Homo sapiens GN=RAB25 PE=1 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 7.532e-39 Identity = 81/156 (51.92%), Postives = 106/156 (67.95%), Query Frame = -3 Query: 122 VKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDAYKAELSVNRVTLVKDGANSSKGSMMDFSCC 589 VKAQIWDTAG ER+RA+TSAYYRGAVGAL+V+D+T+ ++ V+RWL+EL H + + MLVGNK DL R+V TEE + AE GL F+ETSALDSTNVE AFE V++EI++ +S++ NS + N +TL A G +CC Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNS------IRTNAITLGSAQAGQEPGPGEKRACC 210
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAB25_RABIT (Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.285e-38 Identity = 80/156 (51.28%), Postives = 105/156 (67.31%), Query Frame = -3 Query: 122 VKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDAYKAELSVNRVTLVKDGANSSKGSMMDFSCC 589 VKAQIWDTAG ER+RA+TSAYYRGAVGAL+V+D+T+ ++ V+RWL+EL H + + MLVGNK DL R+V TEE + AE GL F+ETSALDSTNVE AFE V++EI++ +S+++ NS N + L A G +CC Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQIQNSP------RSNAIALGSAQAGQEPGPGQKRACC 210
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.738e-38 Identity = 76/130 (58.46%), Postives = 100/130 (76.92%), Query Frame = -3 Query: 215 IDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSD 604 I K VKAQIWDTAGQER+RAVTSAYYRGAVGA++VYDIT+R +F+ + RWLEEL H D + ML GNK DL+ R V TE+ K A++EGLFF+ETSA+++T +E AF V+ EI++ +++K L +D Sbjct: 59 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAAD 188
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAB25_BOVIN (Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 4.882e-38 Identity = 80/156 (51.28%), Postives = 105/156 (67.31%), Query Frame = -3 Query: 122 VKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDAYKAELSVNRVTLVKDGANSSKGSMMDFSCC 589 +KAQIWDTAG ER+RA+TSAYYRGAVGAL+V+D+T+ ++ V+RWL+EL H + + MLVGNK DL R+V TEE + AE GL F+ETSALDSTNVE AFE V++EI++ +S++ N+ N VTL A G +CC Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNN------ARTNAVTLGSGPAGQELGPGEKRACC 210
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.088e-37 Identity = 78/170 (45.88%), Postives = 117/170 (68.82%), Query Frame = -3 Query: 119 QVVDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDAYKAELSV----NRVTLVKDGANSSKGSMMDFSCCA 616 + + ++GK VKAQIWDTAGQER+RA+TSAYYRGAVGAL+ YDIT+R +F++V+RWL EL H D+ + +L GNK DL +R VS ++ ++L ++EGL F+ETSAL++ NV+ AF+ ++ +IY IS+K L + A ++ + + + AN +G CC+ Sbjct: 52 RTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKKALAAQEAAASTALPGQGTTINVSDNSANVKRG------CCS 215
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAB25_MOUSE (Ras-related protein Rab-25 OS=Mus musculus GN=Rab25 PE=1 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 2.423e-37 Identity = 80/156 (51.28%), Postives = 104/156 (66.67%), Query Frame = -3 Query: 122 VKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDAYKAELSVNRVTLVKDGANSSKGSMMDFSCC 589 VKAQIWDTAG ER+RA+TSAYYRGAVGAL+V+D+T+ ++ V+RWL+EL H + + MLVGNK DL R+V TEE AE GL F+ETSALDSTNVE AF+ V++EI++ +S++ NS A +TL A G +CC Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQKQNSTRTSA------ITLGNAQAGQDPGPGEKRACC 210 The following BLAST results are available for this feature:
BLAST of CX069739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069739 ID=CX069739; Name=CX069739; organism=Citrus sinensis; type=EST; length=621bpback to top |