CX069739

Overview
NameCX069739
Unique NameCX069739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length621
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAS2_RHIRA (Ras-like protein 2 OS=Rhizomucor racemosus GN=RAS2 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.868e-13
Identity = 45/133 (33.83%), Postives = 67/133 (50.38%), Query Frame = -3
Query:  209 IDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRM-LVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDAY 604
            ID +     I DTAGQE + A+   + R   G +++Y IT   +F  V++  E++    D     M LVGNKCDL+  R V T  G+ LA++    F E SA  +  ++ AF  ++REI  +   K      Y
Sbjct:   54 IDSECAMLDILDTAGQEEYSAMRERFMRNGEGFVLIYSITSYHTFEQVQKLHEQIARVKDLEHFPMVLVGNKCDLEQDRQVPTSAGRDLAKQYNCQFFEASAKQNVRIQDAFHGLVREIRRSQQEKCKKQKQY 186          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAPB_DICDI (Ras-related protein rapB OS=Dictyostelium discoideum GN=rapB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.868e-13
Identity = 46/121 (38.02%), Postives = 70/121 (57.85%), Query Frame = -3
Query:  251 DIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEEL-TTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEE-EGLFFMETSALDSTNVEAAFEVVIREI 607
            ++DG++V  ++ DTAG E   A+   Y + A G ++VY I  +S+F  +K  +E+L     +  V  +LVGNK DLD+ R+VST EGK LA       F E S+ D  NV+  F  +++ I
Sbjct:   64 ELDGEQVCIEVLDTAGSEVLVAMRELYMKNAEGFILVYSILVKSTFLEIKDIVEQLFRVKEEEEVPIVLVGNKIDLDAHREVSTNEGKQLANSYPNCDFWEASSKDRINVDNVFFSIVKRI 184          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAB7_PRUAR (Ras-related protein Rab7 OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.868e-13
Identity = 44/130 (33.85%), Postives = 73/130 (56.15%), Query Frame = -3
Query:  242 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGR----MLVGNKCDLD--SIRDVSTEEGKSLAEEEG-LFFMETSALDSTNVEAAFEVVIREIYSN 610
            V  + +    QIWDTAGQERF+++  A+YRGA   ++VYD+    SF ++  W EE       +       +++GNK D+D  + R VS ++ K+    +G + + ETSA +  NV+ AF+ + +   +N
Sbjct:   50 VQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQATPSDPENFPFVVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDDAFQCIAKNALNN 179          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RSR1_YEAST (Ras-related protein RSR1 OS=Saccharomyces cerevisiae GN=RSR1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.440e-13
Identity = 48/137 (35.04%), Postives = 75/137 (54.74%), Query Frame = -3
Query:  212 QVVDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDT-AVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEG-LFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDA 616
            + ++ID K    +I DTAG  +F A+   Y +  +G L+VY +T R S   +    E++    D+  V  +L+GNK DL + R +S EEG  ++ + G + F ETSAL  +NV+  F  ++R+I  N    V   DA
Sbjct:   42 KTIEIDNKVFDLEILDTAGIAQFTAMRELYIKSGMGFLLVYSVTDRQSLEELMELREQVLRIKDSDRVPMVLIGNKADLINERVISVEEGIEVSSKWGRVPFYETSALLRSNVDEVFVDLVRQIIRNEMESVAVKDA 178          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAS_ARTSA (Ras-like protein (Fragment) OS=Artemia salina PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.440e-13
Identity = 46/130 (35.38%), Postives = 69/130 (53.08%), Query Frame = -3
Query:  230 QVVDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDT-AVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRK 616
            Q V IDG+     I DTAGQE + A+   Y R   G L+V+ +    SF  +  + E++    D   V  +LVGNKCDL + R V   + + +A + G+ F+ETSA     V+  F  ++REI  +  +K
Sbjct:   31 QQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNNAKSFEDISAYREQIKRVKDAEEVPMVLVGNKCDLPT-RAVDMSQAREVARQYGIPFVETSAKTRMGVDDGFYTLVREIKKDKMKK 159          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RASU_DICDI (Ras-like protein rasU OS=Dictyostelium discoideum GN=rasU PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.440e-13
Identity = 45/147 (30.61%), Postives = 75/147 (51.02%), Query Frame = -3
Query:  188 IDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIR--------EIYSNISRKVLNSDAYKAELSVN 604
            ID +     I DTAGQ+   A+ + + +   G ++VY +T RSSF+ ++ +L+++       V  +++ NK DLD  R V+ +EG++ A   G+ FME SA    N++  F  + +         IY N S +  NS   K    +N
Sbjct:   57 IDDQVYMLDILDTAGQDELNAIRNHWIKSCEGFILVYSVTSRSSFDQIQSFLDQIKFLKSEKVPIIMIANKSDLDDERQVTYQEGENFANRFGMSFMEVSAKYKLNIDEVFNQIAQHCVKRRCDHIYINKSIRNKNSIFKKFNQKLN 203          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RASM_HUMAN (Ras-related protein M-Ras OS=Homo sapiens GN=MRAS PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.440e-13
Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = -3
Query:  230 DIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCD-TAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALD-STNVEAAFEVVIREIYSNISRK 607
            +ID +     + DTAGQE F A+   Y R   G L+VY +T ++SF  V R+ + +    D  +   +LV NK DL  +R ++ E+GK +A +  + ++ETSA D   NV+ AF  ++R I   I  K
Sbjct:   55 EIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNIPYIETSAKDPPLNVDKAFHDLVRVIRQQIPEK 182          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAB7L_MOUSE (Ras-related protein Rab-7L1 OS=Mus musculus GN=Rab7l1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.440e-13
Identity = 41/132 (31.06%), Postives = 76/132 (57.58%), Query Frame = -3
Query:  221 DGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGR----MLVGNKCDLDSIRDVSTEEGKSLAEEEGLF-FMETSALDSTNVEAAFEVVIREIYSNISRKVLN 601
            D + V+ Q+WD AGQERF ++T  YYR A   ++++D+T  ++F++ +RW ++L +      G     +L+ NK DL S   VS ++    ++E G   + ETS  ++ N+  A  V++ ++ +N    V++
Sbjct:   53 DSEMVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLLANKSDL-SPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLVEKMMNNSREDVMS 183          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAS_CRYNE (Ras-like protein OS=Cryptococcus neoformans GN=RAS1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.186e-13
Identity = 57/166 (34.34%), Postives = 82/166 (49.40%), Query Frame = -3
Query:  122 IDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLV-GNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREI--YSNIS--RKVLNSDAYKAELSVNRVTLVKDGANSSKGSMMDFSCC 604
            ID +     + DTAGQE + A+   Y R   G L+VY IT RSSF  V  + +++    D     ++V  NKCDL+  R V   EG+ LA+      +ETSA    NV+ AF  V+R I  Y   S   + +N+ A K+++S         G  + K   +D  CC
Sbjct:   52 IDEEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRSSFEEVSTFHQQILRVKDKDYFPVVVVANKCDLEYERQVQPHEGRDLAKRFNAQCIETSAKQRVNVDEAFIAVVRAIRRYQKESGPPQAVNAPA-KSQMS------AVGGRAAEKDDHVDKGCC 210          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RASN_DANRE (GTPase NRas OS=Danio rerio GN=nras PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.186e-13
Identity = 53/132 (40.15%), Postives = 70/132 (53.03%), Query Frame = -3
Query:  218 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDT-AVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNS 610
            V IDG+     I DTAGQE + A+   Y R   G L V+ I    SF  V  + E++    D+  V  +LVGN CDL   R V T++ + LA   G+ F+ETSA     VE AF  ++REI  +   K LNS
Sbjct:   44 VVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADVHLYREQIKRVKDSDDVPMVLVGNICDL--ARTVDTKQAQELARSYGIEFVETSAKTRQGVEDAFYTLVREI-RHYRMKKLNS 172          
The following BLAST results are available for this feature:
BLAST of CX069739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAS2_RHIRA1.868e-1333.83Ras-like protein 2 OS=Rhizomucor racemosus GN=RAS2... [more]
RAPB_DICDI1.868e-1338.02Ras-related protein rapB OS=Dictyostelium discoide... [more]
RAB7_PRUAR1.868e-1333.85Ras-related protein Rab7 OS=Prunus armeniaca PE=2 ... [more]
RSR1_YEAST2.440e-1335.04Ras-related protein RSR1 OS=Saccharomyces cerevisi... [more]
RAS_ARTSA2.440e-1335.38Ras-like protein (Fragment) OS=Artemia salina PE=3... [more]
RASU_DICDI2.440e-1330.61Ras-like protein rasU OS=Dictyostelium discoideum ... [more]
RASM_HUMAN2.440e-1335.94Ras-related protein M-Ras OS=Homo sapiens GN=MRAS ... [more]
RAB7L_MOUSE2.440e-1331.06Ras-related protein Rab-7L1 OS=Mus musculus GN=Rab... [more]
RAS_CRYNE3.186e-1334.34Ras-like protein OS=Cryptococcus neoformans GN=RAS... [more]
RASN_DANRE3.186e-1340.15GTPase NRas OS=Danio rerio GN=nras PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12E06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12E06-J12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069739 ID=CX069739; Name=CX069739; organism=Citrus sinensis; type=EST; length=621bp
CTTTTTTTTGGTCTTCTAATTGGAAGATAGCTAGAAACAACACAAGCAGT
TTGTATTTGTACCGCCAAGGAAGGATAGGATCCTGTGTTATAAATGAAAG
AACAGCTAGAGCTTATTTAGCACAGCATGAGAAATCCATCATGCTGCCTT
TTGAAGAGTTGGCCCCATCCTTAACGAGGGTTACTCGATTGACAGACAAT
TCAGCTTTGTATGCATCAGAGTTGAGTACTTTCCTGCTGATATTGCTGTA
AATTTCTCGGATGACAACCTCAAAAGCAGCTTCAACATTAGTAGAATCAA
GAGCTGATGTCTCCATGAAGAACAATCCTTCTTCCTCCGCAAGGCTTTTG
CCCTCCTCTGTGCTAACATCTCTAATGCTATCCAAATCACACTTGTTCCC
CACCAGCATTCTTCCCACAGCAGTATCACAGTGAGTGGTGAGCTCCTCAA
GCCAGCGTTTAACACTGTTGAAGCTGCTTCTCCTGGTAATATCATAAACC
ACAAGAGCACCAACAGCTCCCCTGTAATAAGCAGAGGTAACAGCTCTAAA
TCTCTCTTGGCCGGCAGTGTCCCAGATCTGGGCCTTCACTTCTTTCCCAT
CAATATCCACCACTTGCGCCT
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