CX069739

Overview
NameCX069739
Unique NameCX069739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length621
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAS1_DROYA (Ras-like protein 1 OS=Drosophila yakuba GN=Ras85D PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.186e-13
Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = -3
Query:  230 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDT-AVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRK 610
            V IDG+     I DTAGQE + A+   Y R   G L+V+ +    SF  +  + E++    D   V  +LVGNKCDL S  +V+ E+ + +A++ G+ ++ETSA     V+ AF  ++REI  +   K
Sbjct:   44 VVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLAS-WNVNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKDKDNK 170          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAS1_DROWI (Ras-like protein 1 OS=Drosophila willistoni GN=Ras85D PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.186e-13
Identity = 46/128 (35.94%), Postives = 70/128 (54.69%), Query Frame = -3
Query:  230 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDT-AVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRK 610
            V IDG+     I DTAGQE + A+   Y R   G L+V+ +    SF  +  + E++    D   V  +LVGNKCDL S  +V  E+ + +A++ G+ ++ETSA     V+ AF  ++REI  +   K
Sbjct:   44 VVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLPS-WNVQNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKDKDNK 170          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAS1_DROSI (Ras-like protein 1 OS=Drosophila simulans GN=Ras85D PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.186e-13
Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = -3
Query:  230 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDT-AVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRK 610
            V IDG+     I DTAGQE + A+   Y R   G L+V+ +    SF  +  + E++    D   V  +LVGNKCDL S  +V+ E+ + +A++ G+ ++ETSA     V+ AF  ++REI  +   K
Sbjct:   44 VVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLAS-WNVNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKDKDNK 170          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAS1_DROME (Ras-like protein 1 OS=Drosophila melanogaster GN=Ras85D PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.186e-13
Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = -3
Query:  230 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDT-AVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRK 610
            V IDG+     I DTAGQE + A+   Y R   G L+V+ +    SF  +  + E++    D   V  +LVGNKCDL S  +V+ E+ + +A++ G+ ++ETSA     V+ AF  ++REI  +   K
Sbjct:   44 VVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLAS-WNVNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKDKDNK 170          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAS1_DROMA (Ras-like protein 1 OS=Drosophila mauritiana GN=Ras85D PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.186e-13
Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = -3
Query:  230 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDT-AVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRK 610
            V IDG+     I DTAGQE + A+   Y R   G L+V+ +    SF  +  + E++    D   V  +LVGNKCDL S  +V+ E+ + +A++ G+ ++ETSA     V+ AF  ++REI  +   K
Sbjct:   44 VVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLAS-WNVNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKDKDNK 170          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAS1_DROGR (Ras-like protein 1 OS=Drosophila grimshawi GN=Ras85D PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.186e-13
Identity = 46/128 (35.94%), Postives = 70/128 (54.69%), Query Frame = -3
Query:  230 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDT-AVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRK 610
            V IDG+     I DTAGQE + A+   Y R   G L+V+ +    SF  +  + E++    D   V  +LVGNKCDL S  +V  E+ + +A++ G+ ++ETSA     V+ AF  ++REI  +   K
Sbjct:   44 VVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLPS-WNVQNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKDKDNK 170          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAS1_DROER (Ras-like protein 1 OS=Drosophila erecta GN=Ras85D PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.186e-13
Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = -3
Query:  230 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDT-AVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRK 610
            V IDG+     I DTAGQE + A+   Y R   G L+V+ +    SF  +  + E++    D   V  +LVGNKCDL S  +V+ E+ + +A++ G+ ++ETSA     V+ AF  ++REI  +   K
Sbjct:   44 VVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLAS-WNVNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKDKDNK 170          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAS1_DROAN (Ras-like protein 1 OS=Drosophila ananassae GN=Ras85D PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.186e-13
Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = -3
Query:  230 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDT-AVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRK 610
            V IDG+     I DTAGQE + A+   Y R   G L+V+ +    SF  +  + E++    D   V  +LVGNKCDL S  +V+ E+ + +A++ G+ ++ETSA     V+ AF  ++REI  +   K
Sbjct:   44 VVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLAS-WNVNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKDKDNK 170          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAS1_DROVI (Ras-like protein 1 OS=Drosophila virilis GN=Ras85D PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.162e-13
Identity = 46/128 (35.94%), Postives = 70/128 (54.69%), Query Frame = -3
Query:  230 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDT-AVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRK 610
            V IDG+     I DTAGQE + A+   Y R   G L+V+ +    SF  +  + E++    D   V  +LVGNKCDL S  +V  E+ + +A++ G+ ++ETSA     V+ AF  ++REI  +   K
Sbjct:   44 VVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLAS-WNVQNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKDKDNK 170          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAB7B_HUMAN (Ras-related protein Rab-7b OS=Homo sapiens GN=RAB7B PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.435e-13
Identity = 39/122 (31.97%), Postives = 70/122 (57.38%), Query Frame = -3
Query:  263 AQVVDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTH---CDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVV 619
            ++++ +    +K QIWDT GQERFR++ S +Y+G+ G ++ +D+T   SF ++  W  ++       + +   +L+GNK DL + R V  E  +    E+ + + E SA +  NV  AFE++
Sbjct:   47 SKIIILGDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSYPMVLLGNKIDL-ADRKVPQEVAQGWCREKDIPYFEVSAKNDINVVQAFEML 167          
The following BLAST results are available for this feature:
BLAST of CX069739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAS1_DROYA3.186e-1335.94Ras-like protein 1 OS=Drosophila yakuba GN=Ras85D ... [more]
RAS1_DROWI3.186e-1335.94Ras-like protein 1 OS=Drosophila willistoni GN=Ras... [more]
RAS1_DROSI3.186e-1335.94Ras-like protein 1 OS=Drosophila simulans GN=Ras85... [more]
RAS1_DROME3.186e-1335.94Ras-like protein 1 OS=Drosophila melanogaster GN=R... [more]
RAS1_DROMA3.186e-1335.94Ras-like protein 1 OS=Drosophila mauritiana GN=Ras... [more]
RAS1_DROGR3.186e-1335.94Ras-like protein 1 OS=Drosophila grimshawi GN=Ras8... [more]
RAS1_DROER3.186e-1335.94Ras-like protein 1 OS=Drosophila erecta GN=Ras85D ... [more]
RAS1_DROAN3.186e-1335.94Ras-like protein 1 OS=Drosophila ananassae GN=Ras8... [more]
RAS1_DROVI4.162e-1335.94Ras-like protein 1 OS=Drosophila virilis GN=Ras85D... [more]
RAB7B_HUMAN5.435e-1331.97Ras-related protein Rab-7b OS=Homo sapiens GN=RAB7... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12E06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12E06-J12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069739 ID=CX069739; Name=CX069739; organism=Citrus sinensis; type=EST; length=621bp
CTTTTTTTTGGTCTTCTAATTGGAAGATAGCTAGAAACAACACAAGCAGT
TTGTATTTGTACCGCCAAGGAAGGATAGGATCCTGTGTTATAAATGAAAG
AACAGCTAGAGCTTATTTAGCACAGCATGAGAAATCCATCATGCTGCCTT
TTGAAGAGTTGGCCCCATCCTTAACGAGGGTTACTCGATTGACAGACAAT
TCAGCTTTGTATGCATCAGAGTTGAGTACTTTCCTGCTGATATTGCTGTA
AATTTCTCGGATGACAACCTCAAAAGCAGCTTCAACATTAGTAGAATCAA
GAGCTGATGTCTCCATGAAGAACAATCCTTCTTCCTCCGCAAGGCTTTTG
CCCTCCTCTGTGCTAACATCTCTAATGCTATCCAAATCACACTTGTTCCC
CACCAGCATTCTTCCCACAGCAGTATCACAGTGAGTGGTGAGCTCCTCAA
GCCAGCGTTTAACACTGTTGAAGCTGCTTCTCCTGGTAATATCATAAACC
ACAAGAGCACCAACAGCTCCCCTGTAATAAGCAGAGGTAACAGCTCTAAA
TCTCTCTTGGCCGGCAGTGTCCCAGATCTGGGCCTTCACTTCTTTCCCAT
CAATATCCACCACTTGCGCCT
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