CX069739

Overview
NameCX069739
Unique NameCX069739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length621
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4307 contig Csv1_Contig4307:1..621. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RHEB_DICDI (GTP-binding protein Rheb homolog OS=Dictyostelium discoideum GN=rheb PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.099e-13
Identity = 40/123 (32.52%), Postives = 70/123 (56.91%), Query Frame = -3
Query:  251 QVVDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTA-VGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREI 616
            +++   G+E   +I DTAGQ+ +  +   Y  G  G ++VY +T  SS   +K   +++ +      + R+LVGNK DLD+ R++S ++G  LA E    F+E S  ++ NVE  F+ ++ E+
Sbjct:   45 KIIRHQGQEYSVEIIDTAGQDEYSILQKQYSIGIHGYILVYSVTSVSSLEVIKVLNDKILSSLGAEKIPRVLVGNKSDLDNERNISRDQGIQLANEWECAFVECSGKNNENVEEVFKQILNEV 167          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RASK_RIVMA (GTPase KRas OS=Rivulus marmoratus GN=kras PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.099e-13
Identity = 47/121 (38.84%), Postives = 66/121 (54.55%), Query Frame = -3
Query:  251 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTA-VGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREI 610
            V IDG+     I DTAGQE + A+   Y R   G L V+ I    SF  +  + E++    D+  V  +LVGNK DL + R V T++ + LA   G+ F+ETSA     V+ AF  ++REI
Sbjct:   44 VVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKYDLPT-RTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREI 163          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAS1_DROPS (Ras-like protein 1 OS=Drosophila pseudoobscura pseudoobscura GN=Ras85D PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.099e-13
Identity = 45/128 (35.16%), Postives = 70/128 (54.69%), Query Frame = -3
Query:  230 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDT-AVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRK 610
            V IDG+     I DTAGQE + A+   Y R   G L+V+ +    SF  +  + E++    D   V  +LVGNKCDL +  +V  E+ + +A++ G+ ++ETSA     V+ AF  ++REI  +   K
Sbjct:   44 VVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDL-TTWNVKNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKDKDNK 170          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RAS1_DROPE (Ras-like protein 1 OS=Drosophila persimilis GN=Ras85D PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.099e-13
Identity = 45/128 (35.16%), Postives = 70/128 (54.69%), Query Frame = -3
Query:  230 VDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDT-AVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRK 610
            V IDG+     I DTAGQE + A+   Y R   G L+V+ +    SF  +  + E++    D   V  +LVGNKCDL +  +V  E+ + +A++ G+ ++ETSA     V+ AF  ++REI  +   K
Sbjct:   44 VVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDL-TTWNVKNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKDKDNK 170          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: CPAS2_DICDI (Circularly permutated Ras protein 2 OS=Dictyostelium discoideum GN=cpras2 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.099e-13
Identity = 42/112 (37.50%), Postives = 60/112 (53.57%), Query Frame = -3
Query:  263 EVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTT--HCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVV 592
            +V   I DTAGQE + A+   YYR     ++ Y I  RSSF +++ +  +L     CD+    +++G K DL+  R VS E+G   A   G  F+ETSA    NV  AF +V
Sbjct: 2846 KVLLDILDTAGQEEYSAMRDQYYRHGDAFILAYSINSRSSFQNLQSYYNQLCRIKDCDSYACVIVIGTKADLEDQRQVSKEDGLLYARSLGAAFIETSAKTGFNVHTAFAIV 2957          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: REBL1_HUMAN (GTPase RhebL1 OS=Homo sapiens GN=RHEBL1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.271e-13
Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = -3
Query:  251 AQVVDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTT-HCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREI 619
            +++V +   E    + DTAGQ+ +  +  ++  G  G ++VY +T   SF  ++   ++L   H  T V  +LVGNK DL   R+V   EGK LAE  G  FME+SA ++   +  F  VI+EI
Sbjct:   44 SKIVTLGKDEFHLHLVDTAGQDEYSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHGKTRVPVVLVGNKADLSPEREVQAVEGKKLAESWGATFMESSARENQLTQGIFTKVIQEI 167          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RB32B_DICDI (Ras-related protein Rab-32B OS=Dictyostelium discoideum GN=rab32B PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.211e-12
Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = -3
Query:  251 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTA----VGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREI 595
            K V  Q+WD AG ERF  +T  YYR A+ A++V+D++R S+F++V +W E++ +    A    +  +L+ NK DL +    S    +   E   + +  TSA + TN+  A   + +EI
Sbjct:  107 KIVSLQLWDIAGHERFGTMTRVYYRYAIAAIIVFDLSRPSTFDAVTKWREDVNSKVVLANQEPIPVLLLANKSDLSTSYVDSEMLDRFCKENNFIGWFATSASNDTNINEAMHFLTKEI 225          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: REBL1_MOUSE (GTPase RhebL1 OS=Mus musculus GN=Rhebl1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.065e-12
Identity = 45/124 (36.29%), Postives = 65/124 (52.42%), Query Frame = -3
Query:  251 AQVVDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTT-HCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREI 619
            ++ V +   E    + DTAGQ+ +  +  +   G  G ++VY +    SF  VK   ++L   H  T +  +LVGNK DL   R+V   EGK LAE  G  FME+SA D+   +  F  VI+EI
Sbjct:   44 SKTVTLGKDEFHLHLVDTAGQDEYSILPYSLIIGVHGYVLVYSVNSLRSFQIVKNLYQKLHEGHGKTRLSVLLVGNKADLSPEREVQAVEGKKLAESWGAMFMESSARDNQLTQDVFIKVIQEI 167          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RB32C_DICDI (Ras-related protein Rab-32C OS=Dictyostelium discoideum GN=rab32C PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.697e-12
Identity = 41/125 (32.80%), Postives = 72/125 (57.60%), Query Frame = -3
Query:  251 QVVDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHC--DTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGL-FFMETSALDSTNVEAAFEVVIREI 616
            +V++I G++V  Q+WD AGQERF  +T  Y++ A GA++V+D TR  +F   K W +++  +C  +  +  +L+ NKCDL +      E+  +  E+     +  TSA + T +  A E +++ I
Sbjct:   68 KVLEIMGQKVLLQLWDIAGQERFGHMTRVYFQNAHGAVIVFDATRSGTFLGAKAWKDDI-DYCFNNENLPTILLANKCDLLTPPYTFPEDINTFCEQNRFNKYFYTSAKEDTGINEALEELVKII 191          
BLAST of CX069739 vs. ExPASy Swiss-Prot
Match: RASM_RAT (Ras-related protein M-Ras OS=Rattus norvegicus GN=Mras PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.697e-12
Identity = 44/128 (34.38%), Postives = 70/128 (54.69%), Query Frame = -3
Query:  230 DIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCD-TAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALD-STNVEAAFEVVIREIYSNISRK 607
            +ID +     + DTAGQE F A+   Y R   G L+VY +T ++SF  V R+ + +    D  +   +LV NK DL  +R V+ ++GK +A +  + ++ETSA D   NV+  F  ++R I   +  K
Sbjct:   55 EIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQQVPEK 182          
The following BLAST results are available for this feature:
BLAST of CX069739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RHEB_DICDI7.099e-1332.52GTP-binding protein Rheb homolog OS=Dictyostelium ... [more]
RASK_RIVMA7.099e-1338.84GTPase KRas OS=Rivulus marmoratus GN=kras PE=2 SV=... [more]
RAS1_DROPS7.099e-1335.16Ras-like protein 1 OS=Drosophila pseudoobscura pse... [more]
RAS1_DROPE7.099e-1335.16Ras-like protein 1 OS=Drosophila persimilis GN=Ras... [more]
CPAS2_DICDI7.099e-1337.50Circularly permutated Ras protein 2 OS=Dictyosteli... [more]
REBL1_HUMAN9.271e-1335.48GTPase RhebL1 OS=Homo sapiens GN=RHEBL1 PE=1 SV=1[more]
RB32B_DICDI1.211e-1233.61Ras-related protein Rab-32B OS=Dictyostelium disco... [more]
REBL1_MOUSE2.065e-1236.29GTPase RhebL1 OS=Mus musculus GN=Rhebl1 PE=2 SV=1[more]
RB32C_DICDI2.697e-1232.80Ras-related protein Rab-32C OS=Dictyostelium disco... [more]
RASM_RAT2.697e-1234.38Ras-related protein M-Ras OS=Rattus norvegicus GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12E06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12E06-J12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069739 ID=CX069739; Name=CX069739; organism=Citrus sinensis; type=EST; length=621bp
CTTTTTTTTGGTCTTCTAATTGGAAGATAGCTAGAAACAACACAAGCAGT
TTGTATTTGTACCGCCAAGGAAGGATAGGATCCTGTGTTATAAATGAAAG
AACAGCTAGAGCTTATTTAGCACAGCATGAGAAATCCATCATGCTGCCTT
TTGAAGAGTTGGCCCCATCCTTAACGAGGGTTACTCGATTGACAGACAAT
TCAGCTTTGTATGCATCAGAGTTGAGTACTTTCCTGCTGATATTGCTGTA
AATTTCTCGGATGACAACCTCAAAAGCAGCTTCAACATTAGTAGAATCAA
GAGCTGATGTCTCCATGAAGAACAATCCTTCTTCCTCCGCAAGGCTTTTG
CCCTCCTCTGTGCTAACATCTCTAATGCTATCCAAATCACACTTGTTCCC
CACCAGCATTCTTCCCACAGCAGTATCACAGTGAGTGGTGAGCTCCTCAA
GCCAGCGTTTAACACTGTTGAAGCTGCTTCTCCTGGTAATATCATAAACC
ACAAGAGCACCAACAGCTCCCCTGTAATAAGCAGAGGTAACAGCTCTAAA
TCTCTCTTGGCCGGCAGTGTCCCAGATCTGGGCCTTCACTTCTTTCCCAT
CAATATCCACCACTTGCGCCT
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