CX069735

Overview
NameCX069735
Unique NameCX069735
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2005 contig Csv1_Contig2005:33..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSJ (Autophagy-related protein 8A OS=Oryza sativa subsp. japonica GN=ATG8A PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.938e-42
Identity = 84/118 (71.19%), Postives = 95/118 (80.51%), Query Frame = 1
Query:   58 MAKSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 411
            MA++ FK EH L             Y DRIPVIVEKA+++D+P IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIF+FV N LPPT ++MSAIYEE KDEDGFLY+TYSGENTFGS
Sbjct:    1 MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGS 118          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSI (Autophagy-related protein 8A OS=Oryza sativa subsp. indica GN=ATG8A PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.938e-42
Identity = 84/118 (71.19%), Postives = 95/118 (80.51%), Query Frame = 1
Query:   58 MAKSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 411
            MA++ FK EH L             Y DRIPVIVEKA+++D+P IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIF+FV N LPPT ++MSAIYEE KDEDGFLY+TYSGENTFGS
Sbjct:    1 MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGS 118          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_PHYIN (Autophagy-related protein 8 OS=Phytophthora infestans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.011e-42
Identity = 85/114 (74.56%), Postives = 93/114 (81.58%), Query Frame = 1
Query:   67 SYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            S FK+EH               YPDRIPVI EKA+RSDIP+IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIF++NVLPPT A+MS IYEE+KD DGFLY+TYSGENTFG
Sbjct:    2 SSFKKEHPFEKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 115          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_YARLI (Autophagy-related protein 8 OS=Yarrowia lipolytica GN=ATG8 PE=3 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 3.248e-41
Identity = 84/115 (73.04%), Postives = 92/115 (80.00%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               Y DR+PVI EK E+SDIP IDKKKYLVPADLTVGQFVYVIRKRIKLS+E+AIFIFVD+VLPPT A+MS+IYEE KDEDGFLYVTYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRRAEAERIRKKYDDRVPVICEKVEKSDIPVIDKKKYLVPADLTVGQFVYVIRKRIKLSSERAIFIFVDDVLPPTAALMSSIYEEHKDEDGFLYVTYSGENTFG 116          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_LACBI (Autophagy-related protein 8 OS=Laccaria bicolor GN=ATG8 PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 3.248e-41
Identity = 84/115 (73.04%), Postives = 91/115 (79.13%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               YPDRIPVI EKA+R+DIP IDKKKYLVP+DLTVGQFVYVIRKRIKL+ EKAIFIFVD VLPPT A+MSAIYEE KDED FLYV+YSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYPDRIPVICEKADRTDIPTIDKKKYLVPSDLTVGQFVYVIRKRIKLAPEKAIFIFVDEVLPPTAALMSAIYEEHKDEDNFLYVSYSGENTFG 116          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_USTMA (Autophagy-related protein 8 OS=Ustilago maydis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.242e-41
Identity = 84/115 (73.04%), Postives = 91/115 (79.13%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               YPDRIPVI EKA+R+DIP IDKKKYLVP+DLTVGQFVYVIRKRIKL+ EKAIFIFVD VLP T A+MSAIYEE KDEDGFLYV+YSGENTFG
Sbjct:    2 RSAFKNEHSFEKRKAEAERIRQKYPDRIPVICEKADRTDIPTIDKKKYLVPSDLTVGQFVYVIRKRIKLAPEKAIFIFVDEVLPATAALMSAIYEEHKDEDGFLYVSYSGENTFG 116          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_PHANO (Autophagy-related protein 8 OS=Phaeosphaeria nodorum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.450e-41
Identity = 85/118 (72.03%), Postives = 90/118 (76.27%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGSHI 417
            +S FK EH               Y DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG  I
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYNDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFGEAI 119          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_PODAN (Autophagy-related protein 8 OS=Podospora anserina GN=ATG8 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.234e-40
Identity = 84/115 (73.04%), Postives = 89/115 (77.39%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               Y DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_PENCW (Autophagy-related protein 8 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=atg8 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.234e-40
Identity = 84/115 (73.04%), Postives = 89/115 (77.39%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               Y DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_NEUCR (Autophagy-related protein 8 OS=Neurospora crassa GN=atg-8 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.234e-40
Identity = 84/115 (73.04%), Postives = 89/115 (77.39%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               Y DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYSDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
The following BLAST results are available for this feature:
BLAST of CX069735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8A_ORYSJ2.938e-4271.19Autophagy-related protein 8A OS=Oryza sativa subsp... [more]
ATG8A_ORYSI2.938e-4271.19Autophagy-related protein 8A OS=Oryza sativa subsp... [more]
ATG8_PHYIN5.011e-4274.56Autophagy-related protein 8 OS=Phytophthora infest... [more]
ATG8_YARLI3.248e-4173.04Autophagy-related protein 8 OS=Yarrowia lipolytica... [more]
ATG8_LACBI3.248e-4173.04Autophagy-related protein 8 OS=Laccaria bicolor GN... [more]
ATG8_USTMA4.242e-4173.04Autophagy-related protein 8 OS=Ustilago maydis GN=... [more]
ATG8_PHANO9.450e-4172.03Autophagy-related protein 8 OS=Phaeosphaeria nodor... [more]
ATG8_PODAN1.234e-4073.04Autophagy-related protein 8 OS=Podospora anserina ... [more]
ATG8_PENCW1.234e-4073.04Autophagy-related protein 8 OS=Penicillium chrysog... [more]
ATG8_NEUCR1.234e-4073.04Autophagy-related protein 8 OS=Neurospora crassa G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12E03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12E03-J6-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069735 ID=CX069735; Name=CX069735; organism=Citrus sinensis; type=EST; length=785bp
GCTCTTTTCTGTTTTTTTTTCCTCTCGCTTCTTCGCTTCGACTCTTCACA
AGGAGGAATGGCAAAGAGTTACTTCAAGCAAGAGCATGATCTTGAGAAGA
GACGCGCAGAGGCTGCAAGGATTAGGGAGAAGTACCCTGACAGGATTCCG
GTGATTGTGGAGAAGGCAGAGAGAAGTGACATACCAAATATAGATAAGAA
GAAGTATCTTGTTCCAGCTGACCTGACTGTAGGACAATTTGTCTATGTCA
TCCGTAAAAGGATCAAACTGAGTGCTGAAAAGGCGATATTTATTTTTGTG
GATAATGTGCTCCCACCTACAGGTGCAATTATGTCTGCCATATACGAAGA
GAAAAAGGATGAAGATGGTTTTCTTTATGTGACTTACAGTGGGGAGAACA
CATTTGGAAGCCACATCCCAGTTTAGCCTTGTGATTATCTATCTGCTCAT
TGTGTGGTTTCTTGTGCGACCGCATTTTTATCTCAATTGTCATCCTTGCT
TTCCGCTGAATATTCCTTTATCGGGCATATTTTATATTTTATAAAGACAT
TGCCAGTGATAATATGTACAGTTACCTATTGTATATAAGTCTTAAAGGCA
TAATATGTCAAGTTTCTTTCTTGCCTTTCTATTTTGATGATTTTTTTTCG
GTTTGGGTATTTGCTGCTGGTTTCAATCTGTAATCTTTATCACGAAATAC
TTGACTTGGAACCCGGATTCGGCGTGTTTGTGAGCCATTGCTATTTTTAA
GATGTAAATTTGACCAACTTATTAAAAGTAAAAAA
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