CX069735

Overview
NameCX069735
Unique NameCX069735
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2005 contig Csv1_Contig2005:33..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_NEOFI (Autophagy-related protein 8 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=atg8 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.234e-40
Identity = 84/115 (73.04%), Postives = 89/115 (77.39%), Query Frame = 1 
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               Y DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_EMENI (Autophagy-related protein 8 OS=Emericella nidulans GN=atg8 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.234e-40
Identity = 84/115 (73.04%), Postives = 89/115 (77.39%), Query Frame = 1 
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               Y DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRAKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_COLLN (Autophagy-related protein 8 OS=Colletotrichum lindemuthianum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.234e-40
Identity = 84/115 (73.04%), Postives = 89/115 (77.39%), Query Frame = 1 
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               Y DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYSDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_ASPTN (Autophagy-related protein 8 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=atg8 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.234e-40
Identity = 84/115 (73.04%), Postives = 89/115 (77.39%), Query Frame = 1 
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               Y DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_ASPOR (Autophagy-related protein 8 OS=Aspergillus oryzae GN=atg8 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.234e-40
Identity = 84/115 (73.04%), Postives = 89/115 (77.39%), Query Frame = 1 
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               Y DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_ASPNC (Autophagy-related protein 8 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=atg8 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.234e-40
Identity = 84/115 (73.04%), Postives = 89/115 (77.39%), Query Frame = 1 
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               Y DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_ASPFU (Autophagy-related protein 8 OS=Aspergillus fumigatus GN=atg8 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.234e-40
Identity = 84/115 (73.04%), Postives = 89/115 (77.39%), Query Frame = 1 
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               Y DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_ASPCL (Autophagy-related protein 8 OS=Aspergillus clavatus GN=atg8 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.234e-40
Identity = 84/115 (73.04%), Postives = 89/115 (77.39%), Query Frame = 1 
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               Y DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8B_ARATH (Autophagy-related protein 8b OS=Arabidopsis thaliana GN=ATG8B PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.234e-40
Identity = 81/117 (69.23%), Postives = 93/117 (79.49%), Query Frame = 1 
Query:   58 MAKSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            M K+ FK  + L             YP+R+PVIVEKA +SD+P+IDKKKYLVPADLT+GQFVYV+RKRIKL AEKAIF+FV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct:    1 MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117
[Close]
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_COCIM (Autophagy-related protein 8 OS=Coccidioides immitis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.105e-40
Identity = 83/116 (71.55%), Postives = 90/116 (77.59%), Query Frame = 1 
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 411
            +S FK EH               Y DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYEE KD+DGFLY+TYSGENTFG+
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDDDGFLYITYSGENTFGN 117
The following BLAST results are available for this feature:
BLAST of CX069735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8_NEOFI1.234e-4073.04Autophagy-related protein 8 OS=Neosartorya fischer... [more]
ATG8_EMENI1.234e-4073.04Autophagy-related protein 8 OS=Emericella nidulans... [more]
ATG8_COLLN1.234e-4073.04Autophagy-related protein 8 OS=Colletotrichum lind... [more]
ATG8_ASPTN1.234e-4073.04Autophagy-related protein 8 OS=Aspergillus terreus... [more]
ATG8_ASPOR1.234e-4073.04Autophagy-related protein 8 OS=Aspergillus oryzae ... [more]
ATG8_ASPNC1.234e-4073.04Autophagy-related protein 8 OS=Aspergillus niger (... [more]
ATG8_ASPFU1.234e-4073.04Autophagy-related protein 8 OS=Aspergillus fumigat... [more]
ATG8_ASPCL1.234e-4073.04Autophagy-related protein 8 OS=Aspergillus clavatu... [more]
ATG8B_ARATH1.234e-4069.23Autophagy-related protein 8b OS=Arabidopsis thalia... [more]
ATG8_COCIM2.105e-4071.55Autophagy-related protein 8 OS=Coccidioides immiti... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12E03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12E03-J6-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069735 ID=CX069735; Name=CX069735; organism=Citrus sinensis; type=EST; length=785bp
GCTCTTTTCTGTTTTTTTTTCCTCTCGCTTCTTCGCTTCGACTCTTCACA
AGGAGGAATGGCAAAGAGTTACTTCAAGCAAGAGCATGATCTTGAGAAGA
GACGCGCAGAGGCTGCAAGGATTAGGGAGAAGTACCCTGACAGGATTCCG
GTGATTGTGGAGAAGGCAGAGAGAAGTGACATACCAAATATAGATAAGAA
GAAGTATCTTGTTCCAGCTGACCTGACTGTAGGACAATTTGTCTATGTCA
TCCGTAAAAGGATCAAACTGAGTGCTGAAAAGGCGATATTTATTTTTGTG
GATAATGTGCTCCCACCTACAGGTGCAATTATGTCTGCCATATACGAAGA
GAAAAAGGATGAAGATGGTTTTCTTTATGTGACTTACAGTGGGGAGAACA
CATTTGGAAGCCACATCCCAGTTTAGCCTTGTGATTATCTATCTGCTCAT
TGTGTGGTTTCTTGTGCGACCGCATTTTTATCTCAATTGTCATCCTTGCT
TTCCGCTGAATATTCCTTTATCGGGCATATTTTATATTTTATAAAGACAT
TGCCAGTGATAATATGTACAGTTACCTATTGTATATAAGTCTTAAAGGCA
TAATATGTCAAGTTTCTTTCTTGCCTTTCTATTTTGATGATTTTTTTTCG
GTTTGGGTATTTGCTGCTGGTTTCAATCTGTAATCTTTATCACGAAATAC
TTGACTTGGAACCCGGATTCGGCGTGTTTGTGAGCCATTGCTATTTTTAA
GATGTAAATTTGACCAACTTATTAAAAGTAAAAAA
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