CX069735

Overview
NameCX069735
Unique NameCX069735
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_CHAGB (Autophagy-related protein 8 OS=Chaetomium globosum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.105e-40
Identity = 83/116 (71.55%), Postives = 90/116 (77.59%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 411
            +S FK EH               Y DRIPVI EK E+SDI  IDKKKYLVP+DLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG+
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFGN 117          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_CRYNE (Autophagy-related protein 8 OS=Cryptococcus neoformans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.749e-40
Identity = 82/117 (70.09%), Postives = 91/117 (77.78%), Query Frame = 1
Query:   58 MAKSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            M +S FK EH               Y DRIPVI EKAE+SDIP IDKKKYLVPADLTVGQFVYVIRKRIKL+ EKAIFIFVD++LPPT A+MS+IY+E KDEDGFLYV Y+ ENTFG
Sbjct:    1 MVRSKFKDEHPFDKRKAEAERIRQKYQDRIPVICEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLAPEKAIFIFVDDILPPTAALMSSIYDEHKDEDGFLYVLYASENTFG 117          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_SCLS1 (Autophagy-related protein 8 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=atg8 PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 8.000e-40
Identity = 82/115 (71.30%), Postives = 89/115 (77.39%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               Y DRIPVI EK E+SDI  IDKKKYLVP+DLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY++YSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYSDRIPVICEKVEKSDIATIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYISYSGENTFG 116          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_BOTFB (Autophagy-related protein 8 OS=Botryotinia fuckeliana (strain B05.10) GN=atg8 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.045e-39
Identity = 82/115 (71.30%), Postives = 89/115 (77.39%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               Y DRIPVI EK E+SDI  IDKKKYLVP+DLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY++YSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYNDRIPVICEKVEKSDIATIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYISYSGENTFG 116          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_SCHPO (Autophagy-related protein 8 OS=Schizosaccharomyces pombe GN=atg8 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.185e-39
Identity = 79/119 (66.39%), Postives = 89/119 (74.79%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGSHIP 420
            +S FK +                YPDRIPVI EK ++SDI  IDKKKYLVP+DLTVGQFVYVIRKRIKLS EKAIFIF+D +LPPT A+MS IYEE K EDGFLY+TYSGENTFG+  P
Sbjct:    2 RSQFKDDFSFEKRKTESQRIREKYPDRIPVICEKVDKSDIAAIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFIDEILPPTAALMSTIYEEHKSEDGFLYITYSGENTFGTVFP 120          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_PICPA (Autophagy-related protein 8 OS=Pichia pastoris GN=ATG8 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.155e-38
Identity = 76/115 (66.09%), Postives = 88/115 (76.52%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               + DRIPVI EK E+SDIP +DK+KYLVP DLTVGQFVYVIRKRIK+ +EKAIFIF+D++LPPT A+MS +YEE KDEDGFLYV YSGENTFG
Sbjct:    2 RSQFKDEHPFEKRKAEAMRIRYKFADRIPVICEKVEKSDIPEVDKRKYLVPCDLTVGQFVYVIRKRIKIPSEKAIFIFIDDILPPTAALMSKVYEEHKDEDGFLYVLYSGENTFG 116          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_MAGGR (Autophagy-related protein 8 OS=Magnaporthe grisea GN=ATG8 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.155e-38
Identity = 81/115 (70.43%), Postives = 87/115 (75.65%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               Y DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFV + LPPT A+MS+IYE  KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYTDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVQDTLPPTAALMSSIYELHKDEDGFLYITYSGENTFG 116          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_CANAL (Autophagy-related protein 8 OS=Candida albicans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.573e-38
Identity = 77/120 (64.17%), Postives = 89/120 (74.17%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGSHIPV 423
            +S FK EH               + DR+PVI EK E SDIP IDK+KYLVP DLTVGQFVYVIRKRIKL +EKAIFIFV+++LPPT A++S IYEE KDEDGFLYV YSGENTFG  + +
Sbjct:    2 RSQFKDEHPFEKRQAEAARIAQRFKDRVPVICEKVENSDIPEIDKRKYLVPVDLTVGQFVYVIRKRIKLPSEKAIFIFVNDILPPTAALISTIYEEHKDEDGFLYVLYSGENTFGEKLAI 121          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_PICST (Autophagy-related protein 8 OS=Pichia stipitis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.733e-38
Identity = 77/120 (64.17%), Postives = 89/120 (74.17%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGSHIPV 423
            +S FK EH               + DR+PVI EK E SDIP IDK+KYLVP DL+VGQFVYVIRKRIKL +EKAIFIFV+++LPPT A++S IYEE KDEDGFLYV YSGENTFG   P+
Sbjct:    2 RSQFKDEHPFEKRQAEATRIAQRFKDRVPVICEKVENSDIPEIDKRKYLVPVDLSVGQFVYVIRKRIKLPSEKAIFIFVNDILPPTAALISTIYEEHKDEDGFLYVLYSGENTFGQKKPL 121          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_YEAST (Autophagy-related protein 8 OS=Saccharomyces cerevisiae GN=ATG8 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.779e-38
Identity = 79/115 (68.70%), Postives = 89/115 (77.39%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            KS FK E+               + +RIPVI EKAE+SDIP IDK+KYLVPADLTVGQFVYVIRKRI L  EKAIFIFV++ LPPT A+MSAIY+E KD+DGFLYVTYSGENTFG
Sbjct:    2 KSTFKSEYPFEKRKAESERIADRFKNRIPVICEKAEKSDIPEIDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAIYQEHKDKDGFLYVTYSGENTFG 116          
The following BLAST results are available for this feature:
BLAST of CX069735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8_CHAGB2.105e-4071.55Autophagy-related protein 8 OS=Chaetomium globosum... [more]
ATG8_CRYNE2.749e-4070.09Autophagy-related protein 8 OS=Cryptococcus neofor... [more]
ATG8_SCLS18.000e-4071.30Autophagy-related protein 8 OS=Sclerotinia sclerot... [more]
ATG8_BOTFB1.045e-3971.30Autophagy-related protein 8 OS=Botryotinia fuckeli... [more]
ATG8_SCHPO5.185e-3966.39Autophagy-related protein 8 OS=Schizosaccharomyces... [more]
ATG8_PICPA1.155e-3866.09Autophagy-related protein 8 OS=Pichia pastoris GN=... [more]
ATG8_MAGGR1.155e-3870.43Autophagy-related protein 8 OS=Magnaporthe grisea ... [more]
ATG8_CANAL2.573e-3864.17Autophagy-related protein 8 OS=Candida albicans GN... [more]
ATG8_PICST5.733e-3864.17Autophagy-related protein 8 OS=Pichia stipitis GN=... [more]
ATG8_YEAST9.779e-3868.70Autophagy-related protein 8 OS=Saccharomyces cerev... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12E03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12E03-J6-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069735 ID=CX069735; Name=CX069735; organism=Citrus sinensis; type=EST; length=785bp
GCTCTTTTCTGTTTTTTTTTCCTCTCGCTTCTTCGCTTCGACTCTTCACA
AGGAGGAATGGCAAAGAGTTACTTCAAGCAAGAGCATGATCTTGAGAAGA
GACGCGCAGAGGCTGCAAGGATTAGGGAGAAGTACCCTGACAGGATTCCG
GTGATTGTGGAGAAGGCAGAGAGAAGTGACATACCAAATATAGATAAGAA
GAAGTATCTTGTTCCAGCTGACCTGACTGTAGGACAATTTGTCTATGTCA
TCCGTAAAAGGATCAAACTGAGTGCTGAAAAGGCGATATTTATTTTTGTG
GATAATGTGCTCCCACCTACAGGTGCAATTATGTCTGCCATATACGAAGA
GAAAAAGGATGAAGATGGTTTTCTTTATGTGACTTACAGTGGGGAGAACA
CATTTGGAAGCCACATCCCAGTTTAGCCTTGTGATTATCTATCTGCTCAT
TGTGTGGTTTCTTGTGCGACCGCATTTTTATCTCAATTGTCATCCTTGCT
TTCCGCTGAATATTCCTTTATCGGGCATATTTTATATTTTATAAAGACAT
TGCCAGTGATAATATGTACAGTTACCTATTGTATATAAGTCTTAAAGGCA
TAATATGTCAAGTTTCTTTCTTGCCTTTCTATTTTGATGATTTTTTTTCG
GTTTGGGTATTTGCTGCTGGTTTCAATCTGTAATCTTTATCACGAAATAC
TTGACTTGGAACCCGGATTCGGCGTGTTTGTGAGCCATTGCTATTTTTAA
GATGTAAATTTGACCAACTTATTAAAAGTAAAAAA
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