CX069735

Overview
NameCX069735
Unique NameCX069735
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2005 contig Csv1_Contig2005:33..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_YEAS7 (Autophagy-related protein 8 OS=Saccharomyces cerevisiae (strain YJM789) GN=ATG8 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.779e-38
Identity = 79/115 (68.70%), Postives = 89/115 (77.39%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            KS FK E+               + +RIPVI EKAE+SDIP IDK+KYLVPADLTVGQFVYVIRKRI L  EKAIFIFV++ LPPT A+MSAIY+E KD+DGFLYVTYSGENTFG
Sbjct:    2 KSTFKSEYPFEKRKAESERIADRFKNRIPVICEKAEKSDIPEIDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAIYQEHKDKDGFLYVTYSGENTFG 116          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_VANPO (Autophagy-related protein 8 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=ATG8 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.779e-38
Identity = 78/116 (67.24%), Postives = 90/116 (77.59%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 411
            KS FK E+               + +RIPVI EKAE+SDIP IDK+KYLVP+DLTVGQFVYVIRKRI L  EKAIFIFV++ LPPT A+MSA+Y+E KD+DGFLYVTYSGENTFGS
Sbjct:    2 KSSFKSEYPFEKRKTESERITEKFQNRIPVICEKAEKSDIPEIDKRKYLVPSDLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAVYQEHKDKDGFLYVTYSGENTFGS 117          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_LODEL (Autophagy-related protein 8 OS=Lodderomyces elongisporus GN=ATG8 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.277e-37
Identity = 76/115 (66.09%), Postives = 87/115 (75.65%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               + DR+PVI EK E SDIP IDK+KYLVP DLTVGQFVYVIRKRIKL +EKAIFIFV+++LPPT A++S IYEE KD+DGFLYV YSGENTFG
Sbjct:    2 RSQFKDEHPFEKRQAEAARIAQRFKDRVPVICEKVENSDIPEIDKRKYLVPVDLTVGQFVYVIRKRIKLPSEKAIFIFVNDILPPTAALISTIYEEHKDDDGFLYVLYSGENTFG 116          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_DEBHA (Autophagy-related protein 8 OS=Debaryomyces hansenii GN=ATG8 PE=3 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 3.716e-37
Identity = 76/115 (66.09%), Postives = 87/115 (75.65%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               + DR+PVI EKAE SDI  IDK+KYLVP DL+VGQFVYVIRKRIKL +EKAIFIF++++LPPT A+MS IYEE KDEDGFLYV YSGENTFG
Sbjct:    2 RSQFKDEHPFEKRKAEATRITQRFNDRLPVICEKAENSDIQEIDKRKYLVPGDLSVGQFVYVIRKRIKLPSEKAIFIFINDILPPTAALMSTIYEEHKDEDGFLYVLYSGENTFG 116          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_PICAN (Autophagy-related protein 8 OS=Pichia angusta GN=ATG8 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.853e-37
Identity = 75/115 (65.22%), Postives = 88/115 (76.52%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            +S FK EH               + DRIPVI EK E SDIP IDK+KYLVP+DLTVGQFVYVIRKRI+L +EKAIFIFV+++LPPT ++MS IYE+ KDEDGFLY+ YSGENTFG
Sbjct:    2 RSQFKDEHPFERRKAEASRIRGKFLDRIPVICEKVEESDIPEIDKRKYLVPSDLTVGQFVYVIRKRIQLPSEKAIFIFVNDILPPTASLMSTIYEQYKDEDGFLYILYSGENTFG 116          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_CANGA (Autophagy-related protein 8 OS=Candida glabrata GN=ATG8 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.412e-36
Identity = 75/115 (65.22%), Postives = 88/115 (76.52%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            KS FK E+               + +RIPVI EKAE+SDIP +DK+KYLVPADLTVGQFVYVIRKRI L  EKAIFIFV++ LPPT ++MS +Y+E KD+DGFLYVTYSGENTFG
Sbjct:    2 KSSFKSEYPFEKRKAESERISEKFQNRIPVICEKAEKSDIPEVDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTASLMSQVYQEHKDKDGFLYVTYSGENTFG 116          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_ASHGO (Autophagy-related protein 8 OS=Ashbya gossypii GN=ATG8 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.109e-36
Identity = 73/115 (63.48%), Postives = 89/115 (77.39%), Query Frame = 1
Query:   67 SYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 411
            S FK E+               + +R+PVI E+AE+SDIP +D++KYLVPADLTVGQFVYVIR+RIKL AEKAIFIFV++ LPPT A+M A+Y+E KD+DGFLYV YSGENTFGS
Sbjct:    2 SSFKSEYPFEKRKAESERICSQFENRVPVICERAEKSDIPEVDRRKYLVPADLTVGQFVYVIRRRIKLPAEKAIFIFVNDTLPPTAALMFAVYQEHKDKDGFLYVKYSGENTFGS 116          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_DICDI (Autophagy-related protein 8 OS=Dictyostelium discoideum GN=atg8 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.366e-36
Identity = 76/118 (64.41%), Postives = 90/118 (76.27%), Query Frame = 1
Query:   67 SYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRI-KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGSHI 417
            S FK +H L             Y DRIPVIVEKA RSD P+IDKKKYLVPAD+TVG+FVY IRK + K+SAEKAI++FV+N +PPT A++S IYE  KDEDGFLY+TYSGENTFGS +
Sbjct:    5 SSFKNDHPLDKRREVAERIRSKYLDRIPVIVEKAPRSDAPDIDKKKYLVPADITVGKFVYEIRKHMTKVSAEKAIYLFVNNTIPPTAALISQIYERYKDEDGFLYITYSGENTFGSDL 122          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8_KLULA (Autophagy-related protein 8 OS=Kluyveromyces lactis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.012e-34
Identity = 73/115 (63.48%), Postives = 87/115 (75.65%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            KS FK E                + +RIPVI E+  +SDIP+IDK+KYLVP DLTVGQFVYVIRKRIKL AEKAIFIFV++ LPPT A+MS+IY++ KD+DGFLYV+YS ENTFG
Sbjct:    2 KSAFKSEFPFEKRKAESERIVQKFHNRIPVICERGGKSDIPDIDKRKYLVPGDLTVGQFVYVIRKRIKLPAEKAIFIFVNDTLPPTAALMSSIYQQHKDKDGFLYVSYSSENTFG 116          
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: GBRL2_RAT (Gamma-aminobutyric acid receptor-associated protein-like 2 OS=Rattus norvegicus GN=Gabarapl2 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.139e-32
Identity = 65/115 (56.52%), Postives = 83/115 (72.17%), Query Frame = 1
Query:   64 KSYFKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408
            K  FK++H L             YPDR+PVIVEK   S I +IDK+KYLVP+D+TV QF+++IRKRI+L +EKAIF+FVD  +P +   M  +YE++KDEDGFLYV YSGENTFG
Sbjct:    2 KWMFKEDHSLEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFG 116          
The following BLAST results are available for this feature:
BLAST of CX069735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8_YEAS79.779e-3868.70Autophagy-related protein 8 OS=Saccharomyces cerev... [more]
ATG8_VANPO9.779e-3867.24Autophagy-related protein 8 OS=Vanderwaltozyma pol... [more]
ATG8_LODEL1.277e-3766.09Autophagy-related protein 8 OS=Lodderomyces elongi... [more]
ATG8_DEBHA3.716e-3766.09Autophagy-related protein 8 OS=Debaryomyces hansen... [more]
ATG8_PICAN4.853e-3765.22Autophagy-related protein 8 OS=Pichia angusta GN=A... [more]
ATG8_CANGA1.412e-3665.22Autophagy-related protein 8 OS=Candida glabrata GN... [more]
ATG8_ASHGO4.109e-3663.48Autophagy-related protein 8 OS=Ashbya gossypii GN=... [more]
ATG8_DICDI5.366e-3664.41Autophagy-related protein 8 OS=Dictyostelium disco... [more]
ATG8_KLULA1.012e-3463.48Autophagy-related protein 8 OS=Kluyveromyces lacti... [more]
GBRL2_RAT6.139e-3256.52Gamma-aminobutyric acid receptor-associated protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12E03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12E03-J6-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069735 ID=CX069735; Name=CX069735; organism=Citrus sinensis; type=EST; length=785bp
GCTCTTTTCTGTTTTTTTTTCCTCTCGCTTCTTCGCTTCGACTCTTCACA
AGGAGGAATGGCAAAGAGTTACTTCAAGCAAGAGCATGATCTTGAGAAGA
GACGCGCAGAGGCTGCAAGGATTAGGGAGAAGTACCCTGACAGGATTCCG
GTGATTGTGGAGAAGGCAGAGAGAAGTGACATACCAAATATAGATAAGAA
GAAGTATCTTGTTCCAGCTGACCTGACTGTAGGACAATTTGTCTATGTCA
TCCGTAAAAGGATCAAACTGAGTGCTGAAAAGGCGATATTTATTTTTGTG
GATAATGTGCTCCCACCTACAGGTGCAATTATGTCTGCCATATACGAAGA
GAAAAAGGATGAAGATGGTTTTCTTTATGTGACTTACAGTGGGGAGAACA
CATTTGGAAGCCACATCCCAGTTTAGCCTTGTGATTATCTATCTGCTCAT
TGTGTGGTTTCTTGTGCGACCGCATTTTTATCTCAATTGTCATCCTTGCT
TTCCGCTGAATATTCCTTTATCGGGCATATTTTATATTTTATAAAGACAT
TGCCAGTGATAATATGTACAGTTACCTATTGTATATAAGTCTTAAAGGCA
TAATATGTCAAGTTTCTTTCTTGCCTTTCTATTTTGATGATTTTTTTTCG
GTTTGGGTATTTGCTGCTGGTTTCAATCTGTAATCTTTATCACGAAATAC
TTGACTTGGAACCCGGATTCGGCGTGTTTGTGAGCCATTGCTATTTTTAA
GATGTAAATTTGACCAACTTATTAAAAGTAAAAAA
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