CX069735
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8L_DICDI (Autophagy-related protein 8-like protein DDB_G0290491 OS=Dictyostelium discoideum GN=DDB_G0290491 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.498e-25 Identity = 58/119 (48.74%), Postives = 81/119 (68.07%), Query Frame = 1 Query: 73 FKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLS---AEKAIFIFVD-NVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGSHI 417 FKQE+ L Y DR+P+IVE+A SD+P+I+KKK+L P+++ + F+ IRK + S +KAIF+FV+ N LPP+ ++S+IY+ KDEDGFLY+ YSGENTFGS I Sbjct: 8 FKQEYSLEKRKLISSKIRNRYKDRLPIIVERAANSDVPDINKKKFLAPSNMVITNFIMEIRKHLDDSDHNEQKAIFLFVNKNNLPPSSQLLSSIYDAHKDEDGFLYICYSGENTFGSDI 126
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: ATG8H_ARATH (Autophagy-related protein 8h OS=Arabidopsis thaliana GN=ATG8H PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.263e-25 Identity = 50/92 (54.35%), Postives = 70/92 (76.09%), Query Frame = 1 Query: 133 YPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408 YPDRIPVI+EK +D+P+++K KYLVP D+TVG F++++ KR++L KA+F+FV N LP T + M ++Y K+EDGFLY+ YS E TFG Sbjct: 28 YPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIHMLSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: MLP3C_HUMAN (Microtubule-associated proteins 1A/1B light chain 3C OS=Homo sapiens GN=MAP1LC3C PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.917e-17 Identity = 47/114 (41.23%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 73 FKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAERSD-IPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDN-VLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408 FKQ L +P++IPV+VE+ R +P +DK K+LVP +LT+ QF+ +IR R+ L A +A ++ V+N L A M+ IY + KDEDGF+Y+TY+ + TFG Sbjct: 13 FKQRKSLAIRQEEVAGIRAKFPNKIPVVVERYPRETFLPPLDKTKFLVPQELTMTQFLSIIRSRMVLRATEAFYLLVNNKSLVSMSATMAEIYRDYKDEDGFVYMTYASQETFG 126
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: MLP3B_RAT (Microtubule-associated proteins 1A/1B light chain 3B OS=Rattus norvegicus GN=Map1lc3b PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 5.222e-15 Identity = 42/127 (33.07%), Postives = 74/127 (58.27%), Query Frame = 1 Query: 73 FKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAE-RSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGSHIPV*PCDYLSA 447 FKQ +P +IPVI+E+ + +P +DK K+LVP + + + + +IR+R++L+A +A F+ V+ + + +S +YE ++DEDGFLY+ Y+ + TFG+ + V Y+SA Sbjct: 7 FKQRRSFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESERDEDGFLYMVYASQETFGTALAV---TYMSA 130
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: MLP3B_HUMAN (Microtubule-associated proteins 1A/1B light chain 3B OS=Homo sapiens GN=MAP1LC3B PE=1 SV=3) HSP 1 Score: 81.2629 bits (199), Expect = 6.820e-15 Identity = 40/119 (33.61%), Postives = 69/119 (57.98%), Query Frame = 1 Query: 73 FKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAE-RSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGSHIPV 423 FKQ +P +IPVI+E+ + +P +DK K+LVP + + + + +IR+R++L+A +A F+ V+ + + +S +YE +KDEDGFLY+ Y+ + TFG + V Sbjct: 7 FKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETFGMKLSV 125
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: MLP3B_MOUSE (Microtubule-associated proteins 1A/1B light chain 3B OS=Mus musculus GN=Map1lc3b PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 1.163e-14 Identity = 39/119 (32.77%), Postives = 70/119 (58.82%), Query Frame = 1 Query: 73 FKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAE-RSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGSHIPV 423 FKQ +P +IPVI+E+ + +P +DK K+LVP + + + + +IR+R++L+A +A F+ V+ + + +S +YE ++DEDGFLY+ Y+ + TFG+ + V Sbjct: 7 FKQRRSFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESERDEDGFLYMVYASQETFGTAMAV 125
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: MLP3B_BOVIN (Microtubule-associated proteins 1A/1B light chain 3B OS=Bos taurus GN=MAP1LC3B PE=1 SV=4) HSP 1 Score: 79.337 bits (194), Expect = 2.591e-14 Identity = 39/119 (32.77%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 73 FKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAE-RSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGSHIPV 423 FKQ +P +IPVI+E+ + +P +DK K+LVP + + + + +IR+R++L+A +A F+ V+ + + + +YE +KDEDGFLY+ Y+ + TFG + V Sbjct: 7 FKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPICEVYESEKDEDGFLYMVYASQETFGMKLSV 125
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: MLP3A_RAT (Microtubule-associated proteins 1A/1B light chain 3A OS=Rattus norvegicus GN=Map1lc3a PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.420e-14 Identity = 39/114 (34.21%), Postives = 67/114 (58.77%), Query Frame = 1 Query: 73 FKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAE-RSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408 FKQ +P +IPVI+E+ + +P +DK K+LVP + + + V +IR+R++L+ +A F+ V+ + + ++ IYE++KDEDGFLY+ Y+ + TFG Sbjct: 7 FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: MLP3A_MOUSE (Microtubule-associated proteins 1A/1B light chain 3A OS=Mus musculus GN=Map1lc3a PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.420e-14 Identity = 39/114 (34.21%), Postives = 67/114 (58.77%), Query Frame = 1 Query: 73 FKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAE-RSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408 FKQ +P +IPVI+E+ + +P +DK K+LVP + + + V +IR+R++L+ +A F+ V+ + + ++ IYE++KDEDGFLY+ Y+ + TFG Sbjct: 7 FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120
BLAST of CX069735 vs. ExPASy Swiss-Prot
Match: MLP3A_HUMAN (Microtubule-associated proteins 1A/1B light chain 3A OS=Homo sapiens GN=MAP1LC3A PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.420e-14 Identity = 39/114 (34.21%), Postives = 67/114 (58.77%), Query Frame = 1 Query: 73 FKQEHDLXXXXXXXXXXXXXYPDRIPVIVEKAE-RSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 408 FKQ +P +IPVI+E+ + +P +DK K+LVP + + + V +IR+R++L+ +A F+ V+ + + ++ IYE++KDEDGFLY+ Y+ + TFG Sbjct: 7 FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120 The following BLAST results are available for this feature:
BLAST of CX069735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069735 ID=CX069735; Name=CX069735; organism=Citrus sinensis; type=EST; length=785bpback to top |