CX069734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: GBRL2_MOUSE (Gamma-aminobutyric acid receptor-associated protein-like 2 OS=Mus musculus GN=Gabarapl2 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.266e-32 Identity = 66/115 (57.39%), Postives = 84/115 (73.04%), Query Frame = -2 Query: 382 KSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 726 K FK++H L KYPDR+PVIVEK S I +IDK+KYLVP+D+TV QF+++IRKRI+L +EKAIF+FVD +P + M +YE++KDEDGFLYV YSGENTFG Sbjct: 2 KWMFKEDHSLEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFG 116
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: GBRL2_HUMAN (Gamma-aminobutyric acid receptor-associated protein-like 2 OS=Homo sapiens GN=GABARAPL2 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.266e-32 Identity = 66/115 (57.39%), Postives = 84/115 (73.04%), Query Frame = -2 Query: 382 KSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 726 K FK++H L KYPDR+PVIVEK S I +IDK+KYLVP+D+TV QF+++IRKRI+L +EKAIF+FVD +P + M +YE++KDEDGFLYV YSGENTFG Sbjct: 2 KWMFKEDHSLEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFG 116
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: GBRL2_BOVIN (Gamma-aminobutyric acid receptor-associated protein-like 2 OS=Bos taurus GN=GABARAPL2 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.266e-32 Identity = 66/115 (57.39%), Postives = 84/115 (73.04%), Query Frame = -2 Query: 382 KSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 726 K FK++H L KYPDR+PVIVEK S I +IDK+KYLVP+D+TV QF+++IRKRI+L +EKAIF+FVD +P + M +YE++KDEDGFLYV YSGENTFG Sbjct: 2 KWMFKEDHSLEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFG 116
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: GBRAP_RAT (Gamma-aminobutyric acid receptor-associated protein OS=Rattus norvegicus GN=Gabarap PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.910e-29 Identity = 62/115 (53.91%), Postives = 81/115 (70.43%), Query Frame = -2 Query: 382 KSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 726 K +K+EH KYPDR+PVIVEKA ++ I ++DKKKYLVP+DLTVGQF ++IRKRI L AE A+F FV+NV+PPT A M +Y+E +ED FLY+ YS E+ +G Sbjct: 2 KFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: GBRAP_RABIT (Gamma-aminobutyric acid receptor-associated protein OS=Oryctolagus cuniculus GN=GABARAP PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.910e-29 Identity = 62/115 (53.91%), Postives = 81/115 (70.43%), Query Frame = -2 Query: 382 KSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 726 K +K+EH KYPDR+PVIVEKA ++ I ++DKKKYLVP+DLTVGQF ++IRKRI L AE A+F FV+NV+PPT A M +Y+E +ED FLY+ YS E+ +G Sbjct: 2 KFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: GBRAP_MOUSE (Gamma-aminobutyric acid receptor-associated protein OS=Mus musculus GN=Gabarap PE=1 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.910e-29 Identity = 62/115 (53.91%), Postives = 81/115 (70.43%), Query Frame = -2 Query: 382 KSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 726 K +K+EH KYPDR+PVIVEKA ++ I ++DKKKYLVP+DLTVGQF ++IRKRI L AE A+F FV+NV+PPT A M +Y+E +ED FLY+ YS E+ +G Sbjct: 2 KFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: GBRAP_HUMAN (Gamma-aminobutyric acid receptor-associated protein OS=Homo sapiens GN=GABARAP PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.910e-29 Identity = 62/115 (53.91%), Postives = 81/115 (70.43%), Query Frame = -2 Query: 382 KSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 726 K +K+EH KYPDR+PVIVEKA ++ I ++DKKKYLVP+DLTVGQF ++IRKRI L AE A+F FV+NV+PPT A M +Y+E +ED FLY+ YS E+ +G Sbjct: 2 KFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: GBRAP_BOVIN (Gamma-aminobutyric acid receptor-associated protein OS=Bos taurus GN=GABARAP PE=3 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.910e-29 Identity = 62/115 (53.91%), Postives = 81/115 (70.43%), Query Frame = -2 Query: 382 KSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 726 K +K+EH KYPDR+PVIVEKA ++ I ++DKKKYLVP+DLTVGQF ++IRKRI L AE A+F FV+NV+PPT A M +Y+E +ED FLY+ YS E+ +G Sbjct: 2 KFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: GBRL1_PONAB (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Pongo abelii GN=GABARAPL1 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.965e-29 Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = -2 Query: 382 KSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 726 K +K++H KYPDR+PVIVEKA ++ +P++DK+KYLVP+DLTVGQF ++IRKRI L E A+F FV+N +PPT A M +YE+ ++ED FLYV YS E+ +G Sbjct: 2 KFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNREEDYFLYVAYSDESVYG 116
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: GBRL1_XENTR (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Xenopus tropicalis GN=gabarapl1 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.106e-28 Identity = 59/115 (51.30%), Postives = 80/115 (69.57%), Query Frame = -2 Query: 382 KSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 726 K +K++H KYPDR+PVIVEKA ++ +P++DK+KYLVP+DLTVGQF ++IRKRI L E A+F FV+N +PPT A M +YE+ +ED FLYV YS E+ +G Sbjct: 2 KFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116 The following BLAST results are available for this feature:
BLAST of CX069734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069734 ID=CX069734; Name=CX069734; organism=Citrus sinensis; type=EST; length=793bpback to top |