CX069734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: MLP3A_BOVIN (Microtubule-associated proteins 1A/1B light chain 3A OS=Bos taurus GN=MAP1LC3A PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.511e-14 Identity = 39/114 (34.21%), Postives = 68/114 (59.65%), Query Frame = -2 Query: 382 FKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAE-RSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 717 FKQ ++P +IPVI+E+ + +P +DK K+LVP + + + V +IR+R++L+ +A F+ V+ + + ++ IYE++KDEDGFLY+ Y+ + TFG Sbjct: 7 FKQRRSFADRCKEVQQIREQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: MP3B2_HUMAN (Microtubule-associated proteins 1A/1B light chain 3 beta 2 OS=Homo sapiens GN=MAP1LC3B2 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.695e-14 Identity = 39/119 (32.77%), Postives = 69/119 (57.98%), Query Frame = -2 Query: 367 FKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAE-RSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGSHIPV 717 FKQ ++P +IPVI+E+ + +P +DK K+LVP + + + + +IR+R++L+A +A F+ V+ + + +S +YE +KDEDGFLY+ + + TFG + V Sbjct: 7 FKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVCASQETFGMKLSV 125
BLAST of CX069734 vs. ExPASy Swiss-Prot
Match: LGG2_CAEEL (Protein lgg-2 OS=Caenorhabditis elegans GN=lgg-2 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.228e-11 Identity = 33/94 (35.11%), Postives = 63/94 (67.02%), Query Frame = -2 Query: 382 PDRIPVIVEK--AERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFV-DNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 654 P+++PVI+E+ ERS +P +D+ K+LVP +TV + + ++R+R++L ++A F+ V + + MS +Y +++D DGF+Y+ Y+ + FG Sbjct: 38 PNKVPVIIERFDGERS-LPLMDRCKFLVPEHITVAELMSIVRRRLQLHPQQAFFLLVNERSMVSNSMSMSNLYSQERDPDGFVYMVYTSQPAFG 130 The following BLAST results are available for this feature:
BLAST of CX069734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069734 ID=CX069734; Name=CX069734; organism=Citrus sinensis; type=EST; length=793bpback to top |